BDGP Sequence Production Resources |
Search the DGRC for LD22559
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 225 |
Well: | 59 |
Vector: | pOT2 |
Associated Gene/Transcript | CG18012-RA |
Protein status: | LD22559.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1625 |
Gene | Date | Evidence |
---|---|---|
CG18012 | 2001-01-01 | Release 2 assignment |
CG18012 | 2002-05-16 | Blastp of sequenced clone |
CG18012 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18012 | 2008-04-29 | Release 5.5 accounting |
CG18012 | 2008-08-15 | Release 5.9 accounting |
CG18012 | 2008-12-18 | 5.12 accounting |
1625 bp (1625 high quality bases) assembled on 2002-05-16
GenBank Submission: AY118918
> LD22559.complete CAGGATTCAACCGAATCACAAACAAAACGCGCAATTCCCTTTGATCGCAG ATAAAGCGCTTATTTTTCTTGCCCAGCGATGGCGGAAGTGCTGCCCAAGA AGCGCAACGCCTGCGTCATCGTGCTGGGCGACATTGGACGCAGTCCGCGC ATGCAGTACCATGCCCAGAGTCTTCTCGAGGAGAACTACCACGTGGACAT GATTGGGTATCTGGAGACGAGGCCGCTGGAGGAACTGACTCAACATCCAC GTTGCCGAATCCACGAGCTAACTGCCGTCCCAGTGACGAACCTAACACCC AAACTGCGCCTGCTCTTCAAGGCCTTTTGGCAGACGCTCAGTCTGCTGAT GGCTCTCATCTCCATTGGCCGTCCCAGCTTCCTACTCGTCCAGAATCCGC CCGGCATTCCCACGCTGATTGTGTGCTATCTGTACTGTGCGGTCACACGA ACCAAGCTGGCCATCGATTGGCACAACTACACGTACACAGTGCTGGCATT GGGAATGTCGAAGGGAGAGCAGAGTCCTCTAATACGATTGGTTAGGCGAC TGGAGCGATACTTCGGCTCCAAGGCACACACACACTTCTGTGTGACGCGG GCCATGCAAGAGGATCTGCAGCAAAACTGGGGCATTGGGCCTGTCAAAGT TCTGTATGATCGTGCGCCCGCGCAATTCCATCCCATCGACTTGACTCACA AGCACGAGCTGTACCTGAAGCTGGCCAAAGACTACCCACAGTTCCAGGCC AAGGACGCCGAACAATCCGATGTTCTGGAGGCCACCGCTCTTACCCAAAA GCTGGCCAGCGGTGTTGTGCAGTACAGACCACAGCGACAAGCCGTGCTGG TTTCCAGCACCAGTTGGACGCCGGACGAGGACTTCGGTATACTGCTTAAG GCTTTGCAAGCTTACGAGGAGACTGCGCAAGCAGAGCCGTTGGTTTATCC TTCCCTGCTGTGTATCATCACCGGAAAGGGGCCACAAAAGGAGCACTATG TGGCGGAGATCGAGAAGCTGCAATGGCAGAAGGTGTCGGTGATCACGCCC TGGCTAGAGATCGAGGACTACCCCACTGTTCTGGCCAGCGCCGACCTGGG CGTGTGTCTGCACTGGAGCACCAGTGGGCTCGACCTGCCCATGAAGGTGG TCGACATGTTCGGCAGCGGGCTGCCTGTCTGCGCCTACGATTTCAAGTGC CTGGATGAGCTGGTGAAGCACGGCGAGAATGGCTTCGTGTTTGGCGACCA TGTTCAGCTGGCCGAGCAGCTGAGGATTTGGTTCGAAAATTTTCCAAAGA ATCCCAGCATCCTGGAGACAAGAGCTGGTTTTCAGCGCAAAATCCAGGAG TTCCAGGAGCTGCGATGGCGGGAGAGTTGGCGCCTGATCGCGGCCCCCGT ACTGGAGGCATTTCTATAGAGCATTTTGACAAAGATTTGACAATTACACG TTATGAGAGACTTCCTTTGATTGCTAATCGCTTTTTCTAGGCTAGTTACT ACAAATTCTGTACACAAAAGAGCTTCAAACTTGCTTATGATGCTTATTTT ATTTTTATAATCGTAGCCTAAAGATAAAAATAAATTGCTAAAAAAAGGAA AAACAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 13634835..13635473 | 639..1 | 3195 | 100 | Minus |
chr3R | 27901430 | chr3R | 13634214..13634775 | 1199..638 | 2810 | 100 | Minus |
chr3R | 27901430 | chr3R | 13633756..13634156 | 1599..1199 | 2005 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 17810479..17811117 | 639..1 | 3195 | 100 | Minus |
3R | 32079331 | 3R | 17809858..17810419 | 1199..638 | 2810 | 100 | Minus |
3R | 32079331 | 3R | 17809400..17809800 | 1599..1199 | 2005 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 17551310..17551948 | 639..1 | 3195 | 100 | Minus |
3R | 31820162 | 3R | 17550689..17551250 | 1199..638 | 2810 | 100 | Minus |
3R | 31820162 | 3R | 17550231..17550631 | 1599..1199 | 2005 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 13633751..13634155 | 1200..1604 | 99 | <- | Minus |
chr3R | 13634214..13634774 | 639..1199 | 100 | <- | Minus |
chr3R | 13634836..13635473 | 1..638 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18012-RA | 1..1341 | 79..1419 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18012-RA | 1..1341 | 79..1419 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18012-RA | 1..1341 | 79..1419 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18012-RA | 1..1341 | 79..1419 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18012-RA | 1..1341 | 79..1419 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18012-RA | 16..1618 | 1..1604 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18012-RA | 10..1607 | 1..1598 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18012-RA | 10..1607 | 1..1598 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18012-RA | 16..1618 | 1..1604 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18012-RA | 10..1607 | 1..1598 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17809395..17809799 | 1200..1604 | 99 | <- | Minus |
3R | 17809858..17810418 | 639..1199 | 100 | <- | Minus |
3R | 17810480..17811117 | 1..638 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17809395..17809799 | 1200..1604 | 99 | <- | Minus |
3R | 17809858..17810418 | 639..1199 | 100 | <- | Minus |
3R | 17810480..17811117 | 1..638 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17809395..17809799 | 1200..1604 | 99 | <- | Minus |
3R | 17809858..17810418 | 639..1199 | 100 | <- | Minus |
3R | 17810480..17811117 | 1..638 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 13635117..13635521 | 1200..1604 | 99 | <- | Minus |
arm_3R | 13635580..13636140 | 639..1199 | 100 | <- | Minus |
arm_3R | 13636202..13636839 | 1..638 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17550226..17550630 | 1200..1604 | 99 | <- | Minus |
3R | 17550689..17551249 | 639..1199 | 100 | <- | Minus |
3R | 17551311..17551948 | 1..638 | 100 | Minus |
Translation from 78 to 1418
> LD22559.hyp MAEVLPKKRNACVIVLGDIGRSPRMQYHAQSLLEENYHVDMIGYLETRPL EELTQHPRCRIHELTAVPVTNLTPKLRLLFKAFWQTLSLLMALISIGRPS FLLVQNPPGIPTLIVCYLYCAVTRTKLAIDWHNYTYTVLALGMSKGEQSP LIRLVRRLERYFGSKAHTHFCVTRAMQEDLQQNWGIGPVKVLYDRAPAQF HPIDLTHKHELYLKLAKDYPQFQAKDAEQSDVLEATALTQKLASGVVQYR PQRQAVLVSSTSWTPDEDFGILLKALQAYEETAQAEPLVYPSLLCIITGK GPQKEHYVAEIEKLQWQKVSVITPWLEIEDYPTVLASADLGVCLHWSTSG LDLPMKVVDMFGSGLPVCAYDFKCLDELVKHGENGFVFGDHVQLAEQLRI WFENFPKNPSILETRAGFQRKIQEFQELRWRESWRLIAAPVLEAFL*
Translation from 78 to 1418
> LD22559.pep MAEVLPKKRNACVIVLGDIGRSPRMQYHAQSLLEENYHVDMIGYLETRPL EELTQHPRCRIHELTAVPVTNLTPKLRLLFKAFWQTLSLLMALISIGRPS FLLVQNPPGIPTLIVCYLYCAVTRTKLAIDWHNYTYTVLALGMSKGEQSP LIRLVRRLERYFGSKAHTHFCVTRAMQEDLQQNWGIGPVKVLYDRAPAQF HPIDLTHKHELYLKLAKDYPQFQAKDAEQSDVLEATALTQKLASGVVQYR PQRQAVLVSSTSWTPDEDFGILLKALQAYEETAQAEPLVYPSLLCIITGK GPQKEHYVAEIEKLQWQKVSVITPWLEIEDYPTVLASADLGVCLHWSTSG LDLPMKVVDMFGSGLPVCAYDFKCLDELVKHGENGFVFGDHVQLAEQLRI WFENFPKNPSILETRAGFQRKIQEFQELRWRESWRLIAAPVLEAFL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18249-PA | 446 | GF18249-PA | 1..446 | 1..446 | 2110 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16746-PA | 446 | GG16746-PA | 1..446 | 1..446 | 2355 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17347-PA | 450 | GH17347-PA | 1..450 | 1..446 | 1925 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Alg1-PA | 446 | CG18012-PA | 1..446 | 1..446 | 2355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23885-PA | 450 | GI23885-PA | 1..450 | 1..446 | 1932 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12024-PA | 447 | GL12024-PA | 3..447 | 2..446 | 1993 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26165-PA | 447 | GA26165-PA | 3..447 | 2..446 | 1993 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15332-PA | 446 | GM15332-PA | 1..446 | 1..446 | 2338 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20206-PA | 446 | GD20206-PA | 1..446 | 1..446 | 2343 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23978-PA | 450 | GJ23978-PA | 1..450 | 1..446 | 1950 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11839-PA | 450 | GK11839-PA | 1..449 | 1..445 | 1899 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25241-PA | 446 | GE25241-PA | 1..446 | 1..446 | 2327 | 97.3 | Plus |