BDGP Sequence Production Resources |
Search the DGRC for LD22701
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 227 |
Well: | 1 |
Vector: | pOT2 |
Associated Gene/Transcript | Bx42-RA |
Protein status: | LD22701.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1956 |
Gene | Date | Evidence |
---|---|---|
CG8264 | 2001-01-01 | Release 2 assignment |
CG8264 | 2002-04-22 | Blastp of sequenced clone |
CG8264 | 2003-01-01 | Sim4 clustering to Release 3 |
Bx42 | 2008-04-29 | Release 5.5 accounting |
Bx42 | 2008-08-15 | Release 5.9 accounting |
Bx42 | 2008-12-18 | 5.12 accounting |
1956 bp (1956 high quality bases) assembled on 2002-04-22
GenBank Submission: AY113364
> LD22701.complete CCCTACACACCCGTACGCTTGTGTGTGTCCGTGTGCGTGCGTGTTTTTTT TTTTCGACTTTTCCATTATAGTTTTTGTGGCTTGCATATTGAAAAGTGAT TTCACATAAGAATTGATTCGCCACAAATAACAGATAAGCTATGTCGCTAT CAAGCCTGCTGCCCACGCCGACGAACGCGATCTGGGATCGGGAGGACGAG CGTCGCCTGGTCGCCCGCGGAGCACCAAAGATCGGAGCCCTGGTCTCCGC CAAAATCGCTGCTCCGCCGTACGGACAGCGTAAGGATTGGGTACCACATA CGGATGCGGACTTTGGCGATGGCGGCGCCTTCCCGGAGATCCATGTGGCG CAATATCCACTAGGTCTGGGAGCACCAGGAAATGTTGGCAAGAAGTCGGA TGCTCTGGCCGTTCGCCTGGACGACAAGGGAAAGGTTAAATACGATGCCA TAGCACGCCAAGGACATGGCAAGGACAAGATTGTGTACTCGTCCATTTCG CAACTGCTGCCGGCGGAGGTGTTGGCCGAAGATGCGGATGAACTACAGCG CCCGGACGAGGAAACGGTGATGGAGACGACGGAGGAGACGCGCCTGGCGC TGGAGAAGCTGACCAACCAGAAGATCACCTCAGCGCTGCCCGTGCGCCAT GCCCAGAAGGCGGGTCCCGCCCAGTACATTCGGTACACGCCCTCGCAGCA GGGCGATACCTTCAATTCGGGCGCCAAGCAGCGTGTCATCCGGATGGTGG AGGCGCAGCTCGATCCGATGGAGCCGCCCAAGTTCCGCATTAACAAAAAG ATTCCACGAGGTCCACCATCGCCGCCGGCACCTGTCCTCCACTCACCATC GCGCAAGGTGACGGTCAAGGAGCAAAAGGAGTGGAAGATCCCGCCCTGCA TATCGAACTGGAAGAACGCCAAAGGTTACACCATTCCACTGGACAAGCGT CTGGCAGCCGATGGACGCGGTCTGCAGCAGGTGCACATCAACGAGAAGTT CGCCAAGATGGCCGAGGCGCTGTACATAGCCGATCGCAAGGCGCGCGAGG CGGTGGAGGCACGCTCCCAGCTGGAAAAGAAGCTGGCCCAAAAGGAGAAG GAGAAGAAGGAGGATATGCTGCGTATGATGGCGCAGCGGGCTCGCGAAGA GCGAGCGGGACTACGCAATCCGGAGGCAGCCGAGCCATCTGGTTCCGGAG CTACAGGATCCGAGGTGCGTGAACGCAACGACTTGCGGGCAGAGCGGCAA AGGGAGCGCCAGCGGGATAGAAACCTGCAGCGGGCGGCTCCCGAAAAGCG ATCGAAACTGCAGAAGGAGAGGGAGCGTGACATTTCTGAGCAAATCGCTT TGGGTCTGCCCGCCAAGAGTGCCGGCAACGGTGAAACGCTCTTCGATCAG CGTCTATTCAACACCACCAAGGGCATGGACTCCGGTTACGGTGATGACGA AGCGTACAATGTGTACGACAAGCCGTGGCGCGATTCCAATACACTGGGCG CTCACATCTACCGACCCAGCAAGCAGGCGGATAGCGATAACTACGGCGGT GATCTGGATGCCATTGTAAATACCAAGCGTTTCGTGCCAGACAAGCAGTT CTCCGGTGCCTCCAAGGAGGCGGCCGCTGGCCAGAGGAGTGGACCCGTTG AGTTCGAGAAGGAGGAGGATCCCTTCGGTCTCGATCAGTTCTTGAACATG GCCAAAAAGGCGCCCAAGCGTGCCGAGGAGAAGAACAACGAGCGCAGCAG CCATTCGGATCGCAAGCGCAGCAAGCGCGATTAGACAAAAGCTTTAGCGT GAGGATTACCAATCATCGTTGTATCGTCATCATCATCATTGCAAACACTA TTCACCATTCACCAACCAAACAAACGTTTTTTTTAACTACTCCAACAACT TGGCGAGAATTTCAATAATAATCACAGGATCTTGACATAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8996113..8997128 | 1938..923 | 5080 | 100 | Minus |
chrX | 22417052 | chrX | 8997190..8997754 | 926..362 | 2825 | 100 | Minus |
chrX | 22417052 | chrX | 8998018..8998381 | 365..1 | 1745 | 99.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8996113..8997126 | 925..1938 | 100 | <- | Minus |
chrX | 8997192..8997752 | 364..924 | 100 | <- | Minus |
chrX | 8998020..8998381 | 1..363 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bx42-RA | 1..1644 | 141..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bx42-RA | 1..1644 | 141..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bx42-RA | 1..1644 | 141..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bx42-RA | 1..1644 | 141..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bx42-RA | 1..1644 | 141..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bx42-RA | 17..1953 | 1..1938 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bx42-RA | 17..1953 | 1..1938 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bx42-RA | 19..1955 | 1..1938 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bx42-RA | 17..1953 | 1..1938 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bx42-RA | 19..1955 | 1..1938 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9104318..9105331 | 925..1938 | 100 | <- | Minus |
X | 9105397..9105957 | 364..924 | 100 | <- | Minus |
X | 9106225..9106586 | 1..363 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9104318..9105331 | 925..1938 | 100 | <- | Minus |
X | 9105397..9105957 | 364..924 | 100 | <- | Minus |
X | 9106225..9106586 | 1..363 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9104318..9105331 | 925..1938 | 100 | <- | Minus |
X | 9105397..9105957 | 364..924 | 100 | <- | Minus |
X | 9106225..9106586 | 1..363 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8998351..8999364 | 925..1938 | 100 | <- | Minus |
arm_X | 8999430..8999990 | 364..924 | 100 | <- | Minus |
arm_X | 9000258..9000619 | 1..363 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9112416..9113429 | 925..1938 | 100 | <- | Minus |
X | 9113495..9114055 | 364..924 | 100 | <- | Minus |
X | 9114323..9114684 | 1..363 | 99 | Minus |
Translation from 140 to 1783
> LD22701.pep MSLSSLLPTPTNAIWDREDERRLVARGAPKIGALVSAKIAAPPYGQRKDW VPHTDADFGDGGAFPEIHVAQYPLGLGAPGNVGKKSDALAVRLDDKGKVK YDAIARQGHGKDKIVYSSISQLLPAEVLAEDADELQRPDEETVMETTEET RLALEKLTNQKITSALPVRHAQKAGPAQYIRYTPSQQGDTFNSGAKQRVI RMVEAQLDPMEPPKFRINKKIPRGPPSPPAPVLHSPSRKVTVKEQKEWKI PPCISNWKNAKGYTIPLDKRLAADGRGLQQVHINEKFAKMAEALYIADRK AREAVEARSQLEKKLAQKEKEKKEDMLRMMAQRAREERAGLRNPEAAEPS GSGATGSEVRERNDLRAERQRERQRDRNLQRAAPEKRSKLQKERERDISE QIALGLPAKSAGNGETLFDQRLFNTTKGMDSGYGDDEAYNVYDKPWRDSN TLGAHIYRPSKQADSDNYGGDLDAIVNTKRFVPDKQFSGASKEAAAGQRS GPVEFEKEEDPFGLDQFLNMAKKAPKRAEEKNNERSSHSDRKRSKRD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19111-PA | 547 | GF19111-PA | 1..547 | 1..547 | 2809 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19003-PA | 547 | GG19003-PA | 1..547 | 1..547 | 2833 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12382-PA | 551 | GH12382-PA | 1..551 | 1..547 | 2457 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bx42-PB | 547 | CG8264-PB | 1..547 | 1..547 | 2825 | 100 | Plus |
Bx42-PA | 547 | CG8264-PA | 1..547 | 1..547 | 2825 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15876-PA | 543 | GI15876-PA | 1..543 | 1..547 | 2461 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12909-PA | 509 | GL12909-PA | 1..509 | 1..547 | 2195 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20940-PA | 547 | GA20940-PA | 1..547 | 1..547 | 2563 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13680-PA | 541 | GM13680-PA | 1..541 | 1..547 | 2810 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24563-PA | 547 | GD24563-PA | 1..547 | 1..547 | 2861 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18702-PA | 545 | GJ18702-PA | 1..545 | 1..547 | 2477 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16274-PA | 549 | GK16274-PA | 1..549 | 1..547 | 2433 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17416-PA | 547 | GE17416-PA | 1..547 | 1..547 | 2829 | 97.4 | Plus |
Translation from 140 to 1783
> LD22701.hyp MSLSSLLPTPTNAIWDREDERRLVARGAPKIGALVSAKIAAPPYGQRKDW VPHTDADFGDGGAFPEIHVAQYPLGLGAPGNVGKKSDALAVRLDDKGKVK YDAIARQGHGKDKIVYSSISQLLPAEVLAEDADELQRPDEETVMETTEET RLALEKLTNQKITSALPVRHAQKAGPAQYIRYTPSQQGDTFNSGAKQRVI RMVEAQLDPMEPPKFRINKKIPRGPPSPPAPVLHSPSRKVTVKEQKEWKI PPCISNWKNAKGYTIPLDKRLAADGRGLQQVHINEKFAKMAEALYIADRK AREAVEARSQLEKKLAQKEKEKKEDMLRMMAQRAREERAGLRNPEAAEPS GSGATGSEVRERNDLRAERQRERQRDRNLQRAAPEKRSKLQKERERDISE QIALGLPAKSAGNGETLFDQRLFNTTKGMDSGYGDDEAYNVYDKPWRDSN TLGAHIYRPSKQADSDNYGGDLDAIVNTKRFVPDKQFSGASKEAAAGQRS GPVEFEKEEDPFGLDQFLNMAKKAPKRAEEKNNERSSHSDRKRSKRD*