BDGP Sequence Production Resources |
Search the DGRC for LD22754
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 227 |
Well: | 54 |
Vector: | pOT2 |
Associated Gene/Transcript | noi-RA |
Protein status: | LD22754.pep: gold |
Preliminary Size: | 1637 |
Sequenced Size: | 1857 |
Gene | Date | Evidence |
---|---|---|
CG2925 | 2001-01-01 | Release 2 assignment |
CG2925 | 2001-07-04 | Blastp of sequenced clone |
CG2925 | 2003-01-01 | Sim4 clustering to Release 3 |
noi | 2008-04-29 | Release 5.5 accounting |
noi | 2008-08-15 | Release 5.9 accounting |
noi | 2008-12-18 | 5.12 accounting |
1857 bp (1857 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051676
> LD22754.complete TTTTAATGTACACACGCTGACGAAAAGTTGTGTTTTCTTCGGGATTTCGC TAAGTGAAAGGCCTCCATTTGATATTTCCCCGCATTAAATCCTCGCATTC AAGAGCCATGGAGACGCTCCTGGAGCAACAGCGGCGCCTACACGAGGAGC GCGAGCGCCTGGTCAAACTGATGGTGGACGAGCATGCGACCAAAAAGCCG GGCGAAAAGGAGCGCATCCATTCGGAGCACCGGCTTAAATACCTCATGGA ACTGCATCACAACTCTACGTCCCAGCTACGCGATCTCTACGAGGACAAGG ACAATGAACGAAAGGCGGAGATTGCCGCTCTTTCGGGGCCCAACGAGTTC AATGAGTTCTACGCCCGCCTCAAGCAAATCAAGCAGTTCTACAAGTCCCA TCCGGCGGAGGTCAGCGTGCCGCTGTCCGTCGAGTTCGACGAGATGATTC GGGTGTACAACAATCCGGACGACATGAGTGCCCTAGTGGAGTTCACTGAC GAGGAGGGCGGCGGTCGCTATCTGGACCTCAACGAGTGCTACGAGCTGTA CCTCAACTTGCGGTCGGTGGAGAAACTGGACTATATCACTTACCTTATGT CCTTTGACCACGTCTTCGATATTCCGAGAGAGCGCAAGAACCGCGAGTAC CGCATATACATAGAGACCCTCAACGACTACCTGCACCACTTCATCCTCCG AATCCAGCCCTTGCTCGACCTGGAGGGCGAACTGCTAAAGGTGGAACTTG ACTTCCAGCGCCAGTGGCTGATGGGCACATTTCCGGGTTTTTCGATTAAG GAAACTGAGTCGGCGTTGGCCAACACCGGCGCCCACCTTGATCTATCCGC CTTCTCCAGCTGGGAGGAGCTGGCCTCGCTAGGACTGGATCGTCTAAAGT CGGCTTTGGTGGCTCTGGGTCTTAAGTGCGGCGGCACCCTGGAGGAGCGA GCACAGCGTTTATTCTCTACAAAAGGTAAAAGCACCTTGGATCCCGCACT GATGGCCAAGAAGCCCAGCGCAAAGACTGCTAGTGCCCAGTCACGGGAGC ACGAACGCCACAAGGAGATTGCCCAGCTAGAGGCTCTGCTCTACAAATAC GCGGATCTGTTGTCTGAGCAGAGAGCGGCTACCAAGGAGAATGTGCAGAG AAAACAGGCTCGGACTGGTGGCGAGCGGGACGATAGCGATGTGGAGGCCA GCGAGTCGGACAACGAAGATGATCCCGACGCGGACGACGTTCCGTACAAT CCCAAGAACTTGCCGCTCGGATGGGACGGTAAACCTATCCCCTACTGGTT GTATAAACTGCATGGCCTGAATATTAGCTATAATTGCGAGATATGTGGAA ACTTCACCTACAAGGGTCCTAAGGCTTTTCAACGACACTTCGCCGAGTGG CGGCATGCGCACGGCATGCGATGCCTCGGCATTCCGAACACCGCCCATTT CGCCAATGTCACCCAGATCGAGGACGCAATCACGTTGTGGGAAAAACTCA AGTCGCAAAAGCAGAGCGAGCGCTGGGTAGCCGATCAGGAGGAAGAGTTC GAGGACTCGCTGGGAAACGTTGTCAACCGAAAGACGTTCGAGGATCTAAA ACGCCAGGGTCTACTTTAGAGGACAAGCCTACGATTATGGTCGCTTGAGT ACCGGTCAATTCTATATGACGCTTCCTCTAAAACCTCAACAGTCTTTATA ATTCAAAACGGAATGACACTAAAATTGGTTTTATTTAAGGAATCTAATGT TAAGCCATAAAACCATTGGGCGTCCTTTTATTCATTAAAGAAAGACCATG GATCAGCCAACGATTCATGATTAGAATCAATTGTAGTTTAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
noi-RA | 1864 | noi-RA | 20..1862 | 1..1843 | 9215 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1415260..1417098 | 1839..1 | 9195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5589593..5591439 | 1847..1 | 9220 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5330424..5332270 | 1847..1 | 9220 | 99.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1415260..1417098 | 1..1839 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
noi-RA | 1..1512 | 108..1619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
noi-RA | 1..1512 | 108..1619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
noi-RA | 1..1512 | 108..1619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
noi-RA | 1..1512 | 108..1619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
noi-RA | 1..1512 | 108..1619 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
noi-RA | 20..1858 | 1..1839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
noi-RA | 20..1858 | 1..1839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
noi-RA | 21..1859 | 1..1839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
noi-RA | 20..1858 | 1..1839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
noi-RA | 21..1859 | 1..1839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5589601..5591439 | 1..1839 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5589601..5591439 | 1..1839 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5589601..5591439 | 1..1839 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1415323..1417161 | 1..1839 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5330432..5332270 | 1..1839 | 100 | Minus |
Translation from 107 to 1618
> LD22754.hyp METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELH HNSTSQLRDLYEDKDNERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPA EVSVPLSVEFDEMIRVYNNPDDMSALVEFTDEEGGGRYLDLNECYELYLN LRSVEKLDYITYLMSFDHVFDIPRERKNREYRIYIETLNDYLHHFILRIQ PLLDLEGELLKVELDFQRQWLMGTFPGFSIKETESALANTGAHLDLSAFS SWEELASLGLDRLKSALVALGLKCGGTLEERAQRLFSTKGKSTLDPALMA KKPSAKTASAQSREHERHKEIAQLEALLYKYADLLSEQRAATKENVQRKQ ARTGGERDDSDVEASESDNEDDPDADDVPYNPKNLPLGWDGKPIPYWLYK LHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFAN VTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQ GLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
noi-PA | 503 | CG2925-PA | 1..503 | 1..503 | 2643 | 100 | Plus |
Translation from 107 to 1618
> LD22754.pep METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELH HNSTSQLRDLYEDKDNERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPA EVSVPLSVEFDEMIRVYNNPDDMSALVEFTDEEGGGRYLDLNECYELYLN LRSVEKLDYITYLMSFDHVFDIPRERKNREYRIYIETLNDYLHHFILRIQ PLLDLEGELLKVELDFQRQWLMGTFPGFSIKETESALANTGAHLDLSAFS SWEELASLGLDRLKSALVALGLKCGGTLEERAQRLFSTKGKSTLDPALMA KKPSAKTASAQSREHERHKEIAQLEALLYKYADLLSEQRAATKENVQRKQ ARTGGERDDSDVEASESDNEDDPDADDVPYNPKNLPLGWDGKPIPYWLYK LHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFAN VTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQ GLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20764-PA | 503 | GF20764-PA | 1..503 | 1..503 | 2625 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10938-PA | 503 | GG10938-PA | 1..503 | 1..503 | 2662 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17377-PA | 503 | GH17377-PA | 1..503 | 1..503 | 2512 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
noi-PA | 503 | CG2925-PA | 1..503 | 1..503 | 2643 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23921-PA | 503 | GI23921-PA | 1..503 | 1..503 | 2476 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21522-PA | 503 | GL21522-PA | 1..503 | 1..503 | 2507 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15523-PA | 503 | GA15523-PA | 1..503 | 1..503 | 2507 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10615-PA | 503 | GM10615-PA | 1..503 | 1..503 | 2682 | 99.4 | Plus |
Dsec\GM15455-PA | 186 | GM15455-PA | 1..186 | 318..503 | 1013 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19603-PA | 503 | GD19603-PA | 1..503 | 1..503 | 2687 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24013-PA | 503 | GJ24013-PA | 1..503 | 1..503 | 2504 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22655-PA | 504 | GK22655-PA | 1..504 | 1..503 | 2506 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24160-PA | 503 | GE24160-PA | 1..503 | 1..503 | 2655 | 98.4 | Plus |