Clone LD22777 Report

Search the DGRC for LD22777

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:227
Well:77
Vector:pOT2
Associated Gene/Transcriptsw-RB
Protein status:LD22777.pep: gold
Preliminary Size:2438
Sequenced Size:2572

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18000 2003-01-01 Sim4 clustering to Release 3
CG18000 2004-10-05 Blastp of sequenced clone
sw 2008-04-29 Release 5.5 accounting
sw 2008-08-15 Release 5.9 accounting
sw 2008-12-18 5.12 accounting

Clone Sequence Records

LD22777.complete Sequence

2572 bp (2572 high quality bases) assembled on 2004-10-05

GenBank Submission: BT016101

> LD22777.complete
CCGTACAGTAGTAAAATCTTATTCTTGTGTTTAAACTTGTGTTAATTAAG
AATTCGGAATCCCGCTAAGAATCCTAGTCTTCCACACCCTTTGGGCATCT
ATGTAAACCAGCCGCGCCCATTATCTCCTTCGTGTGCCAATAACTGTGCG
AAGTAACTGGCCGTGGGCGATGTTCCATCTCTAGTTAGTCAAAACATTAA
AAGTCAGTCGCATTTTTACATTGTTGAAAAATGATGATTTAAGTACTTAA
AAAGCAGCCGAACAACGAGTAAAGACAGTCAAGAGAGAACTTGGCCCGCC
AGAGATCTAGAGTCCCGTACCGAACGCCCACTCGAACAGCAAATCGCAGC
AGCTAATCGCCCCGAGAAATGGATCGCAAGGCTGAGCTGGAACGCAAGAA
GGCCAAGTTGGCCGCCCTGCGCGAGGAGAAGGATCGCCGGCGTCGCGAGA
AGGAGATCAAGGACATGGAGGAGGCGGCCGGTCGCATTGGCGGCGGAGCA
GGCATCGACAAGGATCAGCGCAAGGATCTCGACGAAATGCTGTCATCGCT
GGGCGTGGCCCCCGTCTCCGAGGTCCTTTCCTCACTCTCCTCCGTCAACT
CGATGACTTCGGACAACTCGAACACACAGACCCCCGACGCCAGCCTCCAA
GCCACTGTCAATGGCCAGAGCGGCGGAAAGAAACAGCCCCTCAACCTAAG
CGTCTACAATGTGCAGGCTACGAACATTCCACCAAAAGAGACACTGGTCT
ACACAAAGCAGACCCAGACGACCAGTACCGGAGGCGGAAACGGCGATGCT
CATGCTACGGATTATTATGGAGACGACGAAGAGAGCTCACTGCAGAACCT
GGGCAACGGATTCACCTCCAAGCTGCCACCGGGCTATCTCACCCACGGCC
TGCCCACCGTTAAGGACGTCGCCCCGGCCATCACACCACTCGAGATCAAG
AAGGAGACTGAAGTGAAGAAGGAGGTCAACGAGCTGTCCGAGGAGCAGAA
GCAGATGATCATACTGTCGGAGAACTTCCAGCGGTTCGTGGTGCGTGCCG
GCCGCGTCATCGAACGGGCCCTCTCGGAGAATGTGGACATATACACGGAC
TACATCGGCGGCGGCGACAGCGAGGAGGCGAACGACGAGCGATCGCATGC
GCGGCTCTCGCTGAACCGCGTCTTCTACGACGAGCGCTGGTCGAAGAACC
GCTGCATCACCAGCATGGACTGGTCCACCCACTTCCCCGAGCTGGTGGTG
GGCTCGTACCACAACAACGAGGAGAGTCCGAACGAGCCGGACGGCGTGGT
GATGGTGTGGAACACCAAGTTCAAGAAGAGCACGCCCGAGGACGTCTTCC
ACTGCCAGAGCGCGGTGATGTCCACCTGCTTTGCCAAGTTCAATCCCAAC
CTGATCCTCGGCGGCACCTATTCGGGCCAGATTGTGCTGTGGGACAATCG
CGTGCAGAAGCGCACGCCCATACAGCGCACGCCCCTCAGTGCCGCGGCGC
ACACGCATCCCGTCTACTGCCTCCAAATGGTGGGCACCCAGAATGCGCAC
AACGTCATCTCCATATCCTCGGACGGCAAGCTGTGCTCCTGGTCGCTGGA
CATGCTGTCGCAACCACAGGACACGCTGGAGCTGCAGCAGCGCCAGTCGA
AGGCCATTGCCATTACATCGATGGCCTTCCCGGCCAACGAGATCAATAGC
CTGGTGATGGGCAGTGAGGACGGCTACGTCTACTCCGCCTCGCGCCACGG
CCTGCGCTCCGGGGTCAACGAGGTTTACGAACGCCATCTTGGCCCTATCA
CTGGCATATCCACGCACTACAACCAGCTGTCGCCGGACTTTGGCCACCTC
TTCCTAACCTCGTCCATTGACTGGACCATCAAGCTCTGGTCGCTAAAGGA
CACAAAGCCGCTGTACTCCTTTGAGGACAACTCCGACTACGTGATGGACG
TCGCCTGGTCGCCCGTGCATCCCGCACTCTTCGCCGCCGTCGACGGCAGC
GGCCGCCTGGATCTGTGGAACCTCAACCAAGACACGGAGGTGCCGACCGC
CTCGATTGTCGTGGCGGGAGCACCAGCCCTTAACCGCGTCTCTTGGACCC
CATCCGGTCTGCACGTGTGCATCGGCGACGAGGCCGGCAAGCTGTACGTG
TACGACGTGGCCGAGAACCTGGCGCAGCCATCGCGCGACGAATGGTCGCG
GTTCAACACCCATCTTAGCGAGATCAAGATGAACCAGAGCGATGAGGTCT
AGGACGATATAGTTAACTGGTAGTTGAGAGTCGGTACCACTTTTGCTAAT
CTTACAGGAGCGACCTTGAATGAAATTTAATTTGTATTTTTGTATCTTTT
GTGATCCCGCTACTGTGTATAGCCCAGAACTCAAAACTTAACCGCAGTCC
AAGTGCTCAGAATCACTCCAAAGCCCCCAAGAAATCAGGGGAAACTGCAA
AATTCTCTAGATGACCACAGTAACTGTACTAGAAGTTTTATTCAATGAAA
CTCGATAGAATAGAGATAAACATAAATGAATACATATATATATACGAAGA
ATAAAAAAAAAAAAAAAAAAAA

LD22777.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
sw-RM 3068 sw-RM 1029..2763 819..2553 8675 100 Plus
sw-RL 3064 sw-RL 1025..2759 819..2553 8675 100 Plus
sw-RF 2942 sw-RF 903..2637 819..2553 8675 100 Plus
sw-RF 2942 sw-RF 16..834 1..819 4095 100 Plus
sw-RM 3068 sw-RM 447..981 285..819 2675 100 Plus
sw-RL 3064 sw-RL 444..977 286..819 2670 100 Plus
sw-RM 3068 sw-RM 16..300 1..285 1425 100 Plus
sw-RL 3064 sw-RL 16..300 1..285 1425 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 20094728..20095652 1899..975 4625 100 Minus
chrX 22417052 chrX 20063479..20064403 1899..975 4595 99.8 Minus
chrX 22417052 chrX 20071295..20072219 1899..975 4595 99.8 Minus
chrX 22417052 chrX 20086854..20087778 1899..975 4595 99.8 Minus
chrX 22417052 chrX 20079044..20079936 1867..975 4450 99.9 Minus
chrX 22417052 chrX 20070575..20071230 2552..1897 3280 100 Minus
chrX 22417052 chrX 20086134..20086789 2552..1897 3280 100 Minus
chrX 22417052 chrX 20094008..20094663 2552..1897 3280 100 Minus
chrX 22417052 chrX 20101668..20101952 285..1 1425 100 Minus
chrX 22417052 chrX 20078687..20078973 2191..1905 1390 99 Minus
chrX 22417052 chrX 20078430..20078689 2478..2219 1285 99.6 Minus
chrX 22417052 chrX 20101093..20101333 524..284 1205 100 Minus
chrX 22417052 chrX 20062950..20063316 2459..2067 1020 85.8 Minus
chrX 22417052 chrX 20072597..20072753 975..819 785 100 Minus
chrX 22417052 chrX 20080314..20080470 975..819 785 100 Minus
chrX 22417052 chrX 20088156..20088312 975..819 785 100 Minus
chrX 22417052 chrX 20096030..20096186 975..819 785 100 Minus
chrX 22417052 chrX 20064786..20064942 975..819 770 99.4 Minus
chrX 22417052 chrX 20100873..20101019 670..524 735 100 Minus
chrX 22417052 chrX 20100360..20100489 798..669 650 100 Minus
chrX 22417052 chrX 20090241..20090370 798..669 635 99.2 Minus
chrX 22417052 chrX 20066818..20066947 798..669 635 99.2 Minus
chrX 22417052 chrX 20074682..20074811 798..669 635 99.2 Minus
chrX 22417052 chrX 20082381..20082510 798..669 635 99.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:12:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:26:40
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20229139..20230063 1899..975 4625 100 Minus
X 23542271 X 20205922..20206846 1899..975 4610 99.9 Minus
X 23542271 X 20174931..20175855 1899..975 4595 99.8 Minus
X 23542271 X 20190482..20191406 1899..975 4595 99.8 Minus
X 23542271 X 20198198..20199122 1899..975 4595 99.8 Minus
X 23542271 X 20182758..20183682 1899..975 4580 99.7 Minus
X 23542271 X 20213615..20214507 1867..975 4450 99.9 Minus
X 23542271 X 20221297..20222189 1867..975 4450 99.9 Minus
X 23542271 X 20182037..20182693 2553..1897 3285 100 Minus
X 23542271 X 20228418..20229074 2553..1897 3285 100 Minus
X 23542271 X 20220653..20221226 2478..1905 2825 99.5 Minus
X 23542271 X 20190123..20190417 2191..1897 1430 99 Minus
X 23542271 X 20197839..20198133 2191..1897 1430 99 Minus
X 23542271 X 20205563..20205857 2191..1897 1430 99 Minus
X 23542271 X 20236083..20236367 285..1 1425 100 Minus
X 23542271 X 20213258..20213544 2191..1905 1390 99 Minus
X 23542271 X 20205306..20205565 2478..2219 1300 100 Minus
X 23542271 X 20213001..20213260 2478..2219 1300 100 Minus
X 23542271 X 20189866..20190125 2478..2219 1285 99.6 Minus
X 23542271 X 20197582..20197841 2478..2219 1285 99.6 Minus
X 23542271 X 20235508..20235748 524..284 1205 100 Minus
X 23542271 X 20174402..20174768 2459..2067 1005 85.5 Minus
X 23542271 X 20214885..20215041 975..819 785 100 Minus
X 23542271 X 20176238..20176394 975..819 785 100 Minus
X 23542271 X 20184060..20184216 975..819 785 100 Minus
X 23542271 X 20191789..20191945 975..819 785 100 Minus
X 23542271 X 20199505..20199661 975..819 785 100 Minus
X 23542271 X 20207229..20207385 975..819 785 100 Minus
X 23542271 X 20222567..20222723 975..819 785 100 Minus
X 23542271 X 20230441..20230597 975..819 785 100 Minus
X 23542271 X 20235288..20235434 670..524 735 100 Minus
X 23542271 X 20234775..20234904 798..669 650 100 Minus
X 23542271 X 20178270..20178399 798..669 635 99.2 Minus
X 23542271 X 20186145..20186274 798..669 635 99.2 Minus
X 23542271 X 20193875..20194004 798..669 635 99.2 Minus
X 23542271 X 20201591..20201720 798..669 635 99.2 Minus
X 23542271 X 20209261..20209390 798..669 635 99.2 Minus
X 23542271 X 20216917..20217046 798..669 635 99.2 Minus
X 23542271 X 20224652..20224781 798..669 635 99.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:45:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 20214278..20215202 1899..975 4625 100 Minus
X 23527363 X 20206404..20207328 1899..975 4595 99.7 Minus
X 23527363 X 20190845..20191769 1899..975 4595 99.7 Minus
X 23527363 X 20183029..20183953 1899..975 4595 99.7 Minus
X 23527363 X 20198594..20199486 1867..975 4450 99.8 Minus
X 23527363 X 20213557..20214213 2553..1897 3285 100 Minus
X 23527363 X 20205683..20206339 2553..1897 3285 100 Minus
X 23527363 X 20190124..20190780 2553..1897 3285 100 Minus
X 23527363 X 20221222..20221506 285..1 1425 100 Minus
X 23527363 X 20198237..20198523 2191..1905 1390 98.9 Minus
X 23527363 X 20197980..20198239 2478..2219 1285 99.6 Minus
X 23527363 X 20220647..20220887 524..284 1205 100 Minus
X 23527363 X 20207706..20207862 975..819 785 100 Minus
X 23527363 X 20199864..20200020 975..819 785 100 Minus
X 23527363 X 20192147..20192303 975..819 785 100 Minus
X 23527363 X 20184336..20184492 975..819 785 100 Minus
X 23527363 X 20215580..20215736 975..819 785 100 Minus
X 23527363 X 20220427..20220573 670..524 735 100 Minus
X 23527363 X 20182673..20182823 2266..2116 695 97.3 Minus
X 23527363 X 20219914..20220043 798..669 650 100 Minus
X 23527363 X 20209791..20209920 798..669 635 99.2 Minus
X 23527363 X 20201931..20202060 798..669 635 99.2 Minus
X 23527363 X 20194232..20194361 798..669 635 99.2 Minus
X 23527363 X 20186368..20186497 798..669 635 99.2 Minus
X 23527363 X 20182500..20182612 2459..2347 385 89.3 Minus
X 23527363 X 20182608..20182679 2342..2271 210 86.1 Minus
X 23527363 X 20182863..20182911 2039..1991 155 87.7 Minus
Blast to na_te.dros performed 2019-03-16 19:26:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Kepler 722 Dbuz\Kepler KEPLER 722bp 440..493 2544..2492 123 72.2 Minus

LD22777.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:27:48 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 20094008..20094661 1899..2552 100 <- Minus
chrX 20094729..20095651 976..1898 100 <- Minus
chrX 20096030..20096185 820..975 100 <- Minus
chrX 20099008..20099028 799..819 100 <- Minus
chrX 20100360..20100487 671..798 100 <- Minus
chrX 20100873..20101019 524..670 100 <- Minus
chrX 20101094..20101331 286..523 100 <- Minus
chrX 20101668..20101952 1..285 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:59:12 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RL 1..451 369..819 100 -> Plus
sw-RL 500..1932 820..2252 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:30:56 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RL 1..451 369..819 100 -> Plus
sw-RL 500..1932 820..2252 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:29:00 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RB 1..1884 369..2252 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:14:48 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RL 1..451 369..819 100 -> Plus
sw-RL 500..1932 820..2252 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:31:54 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RB 1..1884 369..2252 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:35:30 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RA 16..833 1..819 99 -> Plus
sw-RA 856..2588 820..2552 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:30:55 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RA 16..833 1..819 99 -> Plus
sw-RA 856..2588 820..2552 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:29:00 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RB 1..2383 170..2552 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:14:48 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RA 16..833 1..819 99 -> Plus
sw-RA 856..2588 820..2552 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:31:54 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
sw-RB 1..2383 170..2552 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:27:48 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
X 20235288..20235434 524..670 100 <- Minus
X 20228419..20229072 1899..2552 100 <- Minus
X 20229140..20230062 976..1898 100 <- Minus
X 20230441..20230596 820..975 100 <- Minus
X 20233423..20233443 799..819 100 <- Minus
X 20234775..20234902 671..798 100 <- Minus
X 20235509..20235746 286..523 100 <- Minus
X 20236083..20236367 1..285 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:27:48 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
X 20235288..20235434 524..670 100 <- Minus
X 20228419..20229072 1899..2552 100 <- Minus
X 20229140..20230062 976..1898 100 <- Minus
X 20230441..20230596 820..975 100 <- Minus
X 20233423..20233443 799..819 100 <- Minus
X 20234775..20234902 671..798 100 <- Minus
X 20235509..20235746 286..523 100 <- Minus
X 20236083..20236367 1..285 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:27:48 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
X 20235288..20235434 524..670 100 <- Minus
X 20228419..20229072 1899..2552 100 <- Minus
X 20229140..20230062 976..1898 100 <- Minus
X 20230441..20230596 820..975 100 <- Minus
X 20233423..20233443 799..819 100 <- Minus
X 20234775..20234902 671..798 100 <- Minus
X 20235509..20235746 286..523 100 <- Minus
X 20236083..20236367 1..285 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:29:00 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20099493..20100146 1899..2552 100 <- Minus
arm_X 20100214..20101136 976..1898 100 <- Minus
arm_X 20101515..20101670 820..975 100 <- Minus
arm_X 20104497..20104517 799..819 100 <- Minus
arm_X 20105849..20105976 671..798 100 <- Minus
arm_X 20106362..20106508 524..670 100 <- Minus
arm_X 20106583..20106820 286..523 100 <- Minus
arm_X 20107157..20107441 1..285 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:51:40 Download gff for LD22777.complete
Subject Subject Range Query Range Percent Splice Strand
X 20213558..20214211 1899..2552 100 <- Minus
X 20214279..20215201 976..1898 100 <- Minus
X 20215580..20215735 820..975 100 <- Minus
X 20218562..20218582 799..819 100 <- Minus
X 20219914..20220041 671..798 100 <- Minus
X 20220427..20220573 524..670 100 <- Minus
X 20220648..20220885 286..523 100 <- Minus
X 20221222..20221506 1..285 100   Minus

LD22777.pep Sequence

Translation from 368 to 2251

> LD22777.pep
MDRKAELERKKAKLAALREEKDRRRREKEIKDMEEAAGRIGGGAGIDKDQ
RKDLDEMLSSLGVAPVSEVLSSLSSVNSMTSDNSNTQTPDASLQATVNGQ
SGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDAHATDYY
GDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAPAITPLEIKKETEVK
KEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGD
SEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNN
EESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGT
YSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISIS
SDGKLCSWSLDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLVMGSE
DGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTSSI
DWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLW
NLNQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAEN
LAQPSRDEWSRFNTHLSEIKMNQSDEV*

LD22777.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20447-PA 549 GF20447-PA 13..549 101..627 2604 91.1 Plus
Dana\GF24523-PA 585 GF24523-PA 224..490 342..608 219 24.8 Plus
Dana\GF12212-PA 737 GF12212-PA 296..689 216..601 212 21 Plus
Dana\GF21298-PA 666 GF21298-PA 83..510 201..608 193 24 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:50:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18006-PA 671 GG18006-PA 1..671 1..627 3295 93 Plus
Dere\GG13896-PA 571 GG13896-PA 224..490 342..608 219 24.5 Plus
Dere\GG22073-PA 739 GG22073-PA 297..690 216..601 217 21 Plus
Dere\GG19683-PA 651 GG19683-PA 83..497 201..591 203 23.2 Plus
Dere\GG14573-PA 687 GG14573-PA 329..665 309..625 173 22.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12086-PA 661 GH12086-PA 1..661 1..627 2870 89.3 Plus
Dgri\GH14867-PA 571 GH14867-PA 224..490 342..608 225 25.5 Plus
Dgri\GH23321-PA 660 GH23321-PA 161..505 274..608 205 23.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:20
Subject Length Description Subject Range Query Range Score Percent Strand
sw-PB 627 CG18000-PB 1..627 1..627 3275 100 Plus
sw-PN 634 CG18000-PN 1..634 1..627 3257 98.9 Plus
sw-PA 634 CG18000-PA 1..634 1..627 3257 98.9 Plus
sw-PC 626 CG18000-PC 1..626 1..627 3257 99.8 Plus
sw-PD 643 CG18000-PD 1..643 1..627 3248 97.5 Plus
sw-PL 643 CG18000-PL 1..643 1..627 3248 97.5 Plus
sw-PM 643 CG18000-PM 1..643 1..627 3248 97.5 Plus
sw-PE 642 CG18000-PE 1..642 1..627 3242 97.5 Plus
sw-PF 650 CG18000-PF 1..650 1..627 3241 96.5 Plus
sw-PI 627 CG18000-PI 1..627 1..627 3236 99.2 Plus
sw-PK 653 CG18000-PK 1..653 1..627 3220 95.9 Plus
sw-PG 636 CG18000-PG 1..636 1..627 3213 97.5 Plus
sw-PO 643 CG18000-PO 1..643 1..627 3210 96.7 Plus
sw-PH 635 CG18000-PH 1..635 1..627 3210 97.6 Plus
sw-PJ 663 CG18000-PJ 1..663 1..627 3210 94.4 Plus
Sdic2-PC 543 CG33497-PC 9..543 93..627 2754 97.8 Plus
Sdic2-PA 543 CG33497-PA 9..543 93..627 2754 97.8 Plus
Sdic2-PB 535 CG33497-PB 9..535 93..627 2727 97.2 Plus
CG46276-PA 533 CG46276-PA 9..533 93..627 2672 95.9 Plus
CG46275-PA 533 CG46275-PA 9..533 93..627 2672 95.9 Plus
Sdic3-PG 533 CG32823-PG 9..533 93..627 2672 95.9 Plus
Sdic3-PF 533 CG32823-PF 9..533 93..627 2672 95.9 Plus
Sdic3-PE 533 CG32823-PE 9..533 93..627 2672 95.9 Plus
CG46277-PA 544 CG46277-PA 9..544 93..627 2591 91.8 Plus
Sdic1-PA 517 CG9580-PA 9..517 93..627 2445 89.3 Plus
Sdic1-PC 480 CG9580-PC 9..429 93..510 2119 96.2 Plus
Sdic4-PE 487 CG33499-PE 9..425 93..510 2076 95 Plus
Dnai2-PB 576 CG6053-PB 224..490 342..608 215 24.8 Plus
Dnai2-PC 585 CG6053-PC 224..490 342..608 215 24.8 Plus
CG9313-PC 739 CG9313-PC 278..690 200..601 207 21.7 Plus
CG9313-PA 739 CG9313-PA 278..690 200..601 207 21.7 Plus
CG9313-PB 740 CG9313-PB 279..691 200..601 207 21.7 Plus
CG13930-PA 685 CG13930-PA 313..631 295..592 180 23.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11093-PA 643 GI11093-PA 1..643 1..627 2738 86.2 Plus
Dmoj\GI13720-PA 585 GI13720-PA 224..490 342..608 226 25.2 Plus
Dmoj\GI21066-PA 747 GI21066-PA 301..699 211..601 223 22.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12916-PA 285 GL12916-PA 1..220 1..204 731 85.9 Plus
Dper\GL12916-PA 285 GL12916-PA 219..285 561..627 335 89.6 Plus
Dper\GL16341-PA 571 GL16341-PA 224..490 342..608 222 25.2 Plus
Dper\GL26732-PA 644 GL26732-PA 127..497 239..598 212 26 Plus
Dper\GL25707-PA 499 GL25707-PA 8..384 239..608 181 22.4 Plus
Dper\GL12410-PA 691 GL12410-PA 331..654 309..613 156 20.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22798-PA 661 GA22798-PA 1..661 1..627 2972 90.8 Plus
Dpse\GA13906-PA 644 GA13906-PA 127..497 239..598 224 26.8 Plus
Dpse\GA19324-PA 571 GA19324-PA 224..490 342..608 222 25.2 Plus
Dpse\GA25088-PB 742 GA25088-PB 292..694 207..601 221 21.8 Plus
Dpse\GA25088-PA 791 GA25088-PA 341..743 207..601 221 21.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22686-PA 537 GM22686-PA 15..537 111..627 2669 92.6 Plus
Dsec\GM24721-PA 585 GM24721-PA 224..490 342..608 218 24.5 Plus
Dsec\GM15791-PA 698 GM15791-PA 256..649 216..601 218 21.7 Plus
Dsec\GM14183-PA 685 GM14183-PA 327..663 309..625 184 22.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22919-PA 241 GD22919-PA 1..241 387..627 1302 100 Plus
Dsim\GD15550-PA 167 GD15550-PA 1..146 1..146 740 97.9 Plus
Dsim\GD16876-PA 651 GD16876-PA 127..503 239..608 229 24.4 Plus
Dsim\GD11552-PA 739 GD11552-PA 297..690 216..601 222 21.3 Plus
Dsim\GD20029-PA 81 GD20029-PA 29..69 485..525 213 92.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15778-PA 613 GJ15778-PA 1..613 1..627 2649 81.7 Plus
Dvir\GJ21989-PA 749 GJ21989-PA 308..701 216..601 232 24 Plus
Dvir\GJ14064-PA 587 GJ14064-PA 224..490 342..608 219 24.8 Plus
Dvir\GJ15978-PA 662 GJ15978-PA 161..505 274..608 167 22.3 Plus
Dvir\GJ12900-PA 760 GJ12900-PA 407..705 309..590 158 23.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25594-PA 660 GK25594-PA 1..660 1..627 2918 90.6 Plus
Dwil\GK17990-PA 741 GK17990-PA 300..693 216..601 219 21.8 Plus
Dwil\GK10479-PA 585 GK10479-PA 224..490 342..608 218 24.8 Plus
Dwil\GK25656-PA 653 GK25656-PA 83..462 201..563 218 25.6 Plus
Dwil\GK18227-PA 683 GK18227-PA 164..505 270..601 182 22.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15363-PA 671 GE15363-PA 1..671 1..627 3295 93 Plus
Dyak\GE20187-PA 585 GE20187-PA 224..490 342..608 221 24.5 Plus
Dyak\GE12154-PA 739 GE12154-PA 297..690 216..601 221 22 Plus
Dyak\GE20931-PA 685 GE20931-PA 313..663 295..625 192 22.8 Plus

LD22777.hyp Sequence

Translation from 368 to 2251

> LD22777.hyp
MDRKAELERKKAKLAALREEKDRRRREKEIKDMEEAAGRIGGGAGIDKDQ
RKDLDEMLSSLGVAPVSEVLSSLSSVNSMTSDNSNTQTPDASLQATVNGQ
SGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDAHATDYY
GDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAPAITPLEIKKETEVK
KEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGD
SEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNN
EESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGT
YSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISIS
SDGKLCSWSLDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLVMGSE
DGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTSSI
DWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLW
NLNQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAEN
LAQPSRDEWSRFNTHLSEIKMNQSDEV*

LD22777.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:12:38
Subject Length Description Subject Range Query Range Score Percent Strand
sw-PB 627 CG18000-PB 1..627 1..627 3275 100 Plus
sw-PN 634 CG18000-PN 1..634 1..627 3257 98.9 Plus
sw-PA 634 CG18000-PA 1..634 1..627 3257 98.9 Plus
sw-PC 626 CG18000-PC 1..626 1..627 3257 99.8 Plus
sw-PD 643 CG18000-PD 1..643 1..627 3248 97.5 Plus