BDGP Sequence Production Resources |
Search the DGRC for LD22812
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 228 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | scyl-RB |
Protein status: | LD22812.pep: validated not full length |
Preliminary Size: | 2794 |
Sequenced Size: | 2590 |
Gene | Date | Evidence |
---|---|---|
CG7590 | 2001-01-01 | Release 2 assignment |
CG7590 | 2002-01-03 | Blastp of sequenced clone |
scyl | 2008-04-29 | Release 5.5 accounting |
scyl | 2008-08-15 | Release 5.9 accounting |
scyl | 2008-12-18 | 5.12 accounting |
2590 bp (2590 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075382
> LD22812.complete AAACACTGAACACAGTACACAAGAAAACAGACTCTCGCAGCCAGAAAATC AAATGAAGCAGCAGCAGCAAAAACGTGCATAGCCAGACTTTTTCCACTGC TAAAATTTTACAAATCCAAAAAGTTCAATCATTCAACACTGTTTCACGAA GAATTCTATGCTACTGACGTTATATTTTTAAACTAAACTAAACATTTAAA TTTGCCATCAAACAAATGCAACGGACCAACGCCATTTAAGTGATACAACA AAACAAATAAAAGTTTAAACAACATAAGTGCTGTGATTTCCACTACAAAA CAACAACCAACCAACCAACCAACCAACCAACAACAACAACAACAAATGTT AATTTAAACTGCAACCAGAACGTAAAGAGGAAGAATTTAAGCAATCAGCA AGAAAACAAACAGCAAATTGTGATAAATTAAATAAGCTTAATTAAATTGT AAAAGTGATATACAAAGAAGGCGACAAAAGCCGTCGGAAAATTGCGAGCG AGCGAGCGAACGAACGACTTTCGATTCGATTCGACTTTCCAAGCCAACAA AACACAGAAAAACCGATGAAAATGGATGTTATTGCTCGGGAACAAATCAT CTACGGTAGCCTGCAGGGATCAAACAAAAATAAAGGTAAGTGTACCGAAA ATTCGGAGAGAAATTTGTGTCTATAGGGAAGAATCGGGAAAGTTCCAGAA AGATTTTAAAACTTAAAATAAAACATGTGTTTCCCAAAATGCAGTCTACT TTTATCAAATTTGTGTATAAAGCGTACATATTTTTAAATGTTTTTTGAAT ACTTAAACTGTTCTTGAACTTGTGTATAATTTAAATAAAAAAAAAGATGA ACAACAACTGCTGTACAAAGCTCCTTGAAATTTCATCAGCAATTAACTTT GTAATTTACATTTACACAAAAAAATGCATAAAAAATCAATTTGCAATTAC AAAAAGGAAAAATGTCATAAAAAATCATGTTAAATTGTTCGTCACGTACG CAAATTGCAGCAACAACAAAAAACTCCCAGCAGCAATAAAAAAATGATTT TTCGTTTTCTTTTCGTCTCTCTGGCCCTCCGTCTTTTTTAACGTTGCTTT TGCCTCTGCTTCACGTTTGCGTGCTGCGCTTTGAACTCTCGTTCGCTGTT GCCAAGCGGCTGTTTCCTCATTGCCTAGTTGTTTGTTTTTGGCTTCCGTT GCGTTATTCCTAATTTTTGCCAGATGTAGCAATAGAATTTAAGAGGTGTT TTAAGATTGACTAGTAACATTCGTCACTACATTTTTACACTCTATGAAAC TTAATAGTATTCTACCTCGTTTTATTACCAAAACCTTTTACTAATCAATC GTTTTTCCTCCTTTTCAATCATTCCAGATTGGACCAGCAGACTGCCACCG CCGTCGGCATACACTCTGGACCTGATGTCCAAGAAGGCCAAGACGACAAC CGGGGGCAGCAGCAATGGCAGCAATGCTACCGCCACATCCACAACCACAT CCACATCCAGCAGTATTAAGCACAAGCAGCCGGCGGGCAGCAGCAACAAC AATGTTGGCCAAAGTCAGAGCAAGAAGACAAAGCCCAGCGGCAGCTATAA TAGCAATAGCAACTACTACTACTACGCTGCTGACGAGGAGGAGGGCGGTA GCGCTGACTATGCACTGAGCAACTACGATAAGAAGGCTGTCGAGGAGCTG TCCCTGCGATTGCTCGACGAACTGAGGGCGGCCAAGTCGCGTCATTTGAC CTGTACGGAAGTGTCGCTACCCTGTGATCTCACGCCGAGCGTGGCCCGGG AAATAATCCGCGTGTCGGAGAAGGAGCCCCGCGGCATACGCGGCTGCACC ATCTACATTGAGTTCGAGGATGAGCCGAAGAATTCGCGTCGCATTGCCTC GATCAAGGTCGATTCGGATACGGTGTCCACATTCGAAGTGTATCTGACCC TCAGGCAGGATCATCGCGGCTGGACGTCGCTGTTGCCGCAGTTCATGAAG AGTTTGGCCCGCACGATCACCATCAGTCCGGAGTATACGATCACCAAGAA TAAGCTATATTCCGCTGATGGTTTGGGTGCACGCAGGAGCTATAGCTTCG GCAGCCACGCCCATAGACCCAGTGCGGCCATCGCCACGCCCACCAACTAA TGGTGATCAGCTTGATCTGTCAGATATGCATATGTTCGTATATGTGTCTG CGCGAAACAAAAAAAACACCACCCCTGTGATGATCGAGAGCAGTAGTTTG TTGCAGTTTGAAGTGCAACAACGAAGCAAGTATTCGAAGCCACCCCACCT ACACCACACACACACACACACAAACACCTTTAATACACACATACATACAC ACAAACACACACACACACACACACATACACATTAGGTTACGCCAACCACA CTCTCATACTAATACTATATATGGGACCGTAAGGCCCGATTTTTGTAATT GTGACTCTCACCACCATTTTACTTAGATGCGTAGTGCTATAACAAATAAC TAGAGTTTTAAGTTGTTTCTCCTTTTTCAAAAACGCAAAAGCAAGAAAAA CAAAACAAGGCGACAAGAGCGGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
scyl-RB | 3213 | scyl-RB | 18..2607 | 1..2590 | 12890 | 99.8 | Plus |
scyl-RA | 2615 | scyl-RA | 711..1925 | 1376..2590 | 6015 | 99.6 | Plus |
scyl.a | 3266 | scyl.a | 711..1925 | 1376..2590 | 6015 | 99.6 | Plus |
scyl-RA | 2615 | scyl-RA | 78..712 | 1..635 | 3175 | 100 | Plus |
scyl.a | 3266 | scyl.a | 78..712 | 1..635 | 3175 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11243186..11245755 | 1..2572 | 12650 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11252326..11254915 | 1..2590 | 12890 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11245426..11248015 | 1..2590 | 12890 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2472 | 1455..1625 | 207 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2388..2540 | 1457..1621 | 184 | 61.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2448 | 1467..1625 | 179 | 61.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6905 | 1456..1616 | 174 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6913 | 1456..1632 | 169 | 62 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6868 | 1472..1625 | 143 | 60.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6845 | 1537..1622 | 131 | 64 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6809 | 1537..1613 | 126 | 64.9 | Plus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 6489..6597 | 804..699 | 124 | 58.7 | Minus |
Damb\P-element_T | 3329 | Damb\P-element_T P_T 3329bp Derived from AF012414. | 2317..2408 | 125..213 | 119 | 62 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2409 | 1519..1616 | 116 | 59.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11243186..11245485 | 1..2300 | 97 | == | Plus |
chr3L | 11245565..11245755 | 2382..2572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
scyl-RA | 69..843 | 1376..2150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
scyl-RA | 69..843 | 1376..2150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
scyl-RA | 69..843 | 1376..2150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
scyl-RA | 69..843 | 1376..2150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
scyl-RA | 69..843 | 1376..2150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
scyl-RB | 18..2589 | 1..2572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
scyl-RA | 650..1846 | 1376..2572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
scyl-RA | 653..1849 | 1376..2572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
scyl-RB | 18..2589 | 1..2572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
scyl-RA | 653..1849 | 1376..2572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11252326..11254897 | 1..2572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11252326..11254897 | 1..2572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11252326..11254897 | 1..2572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11245426..11247997 | 1..2572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11245426..11247997 | 1..2572 | 100 | Plus |
Translation from 1424 to 2149
> LD22812.pep MSKKAKTTTGGSSNGSNATATSTTTSTSSSIKHKQPAGSSNNNVGQSQSK KTKPSGSYNSNSNYYYYAADEEEGGSADYALSNYDKKAVEELSLRLLDEL RAAKSRHLTCTEVSLPCDLTPSVAREIIRVSEKEPRGIRGCTIYIEFEDE PKNSRRIASIKVDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITI SPEYTITKNKLYSADGLGARRSYSFGSHAHRPSAAIATPTN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25255-PA | 274 | GF25255-PA | 38..274 | 1..241 | 865 | 73.6 | Plus |
Dana\GF25267-PA | 305 | GF25267-PA | 169..305 | 81..215 | 470 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15494-PA | 276 | GG15494-PA | 38..276 | 1..241 | 1044 | 94.6 | Plus |
Dere\GG15507-PA | 299 | GG15507-PA | 158..299 | 75..215 | 447 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16643-PA | 280 | GH16643-PA | 64..279 | 30..240 | 635 | 65.5 | Plus |
Dgri\GH16655-PA | 273 | GH16655-PA | 133..273 | 80..215 | 455 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
scyl-PC | 280 | CG7590-PC | 40..280 | 1..241 | 1230 | 100 | Plus |
scyl-PA | 280 | CG7590-PA | 40..280 | 1..241 | 1230 | 100 | Plus |
chrb-PE | 233 | CG7533-PE | 26..233 | 10..215 | 419 | 45.6 | Plus |
chrb-PC | 299 | CG7533-PC | 92..299 | 10..215 | 419 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11599-PA | 273 | GI11599-PA | 109..246 | 82..219 | 619 | 82.6 | Plus |
Dmoj\GI11614-PA | 304 | GI11614-PA | 159..297 | 80..213 | 441 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22775-PA | 260 | GL22775-PA | 47..259 | 8..240 | 728 | 66.1 | Plus |
Dper\GL22796-PA | 289 | GL22796-PA | 148..289 | 75..215 | 465 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20462-PA | 260 | GA20462-PA | 47..259 | 8..240 | 728 | 66.1 | Plus |
Dpse\GA20420-PA | 289 | GA20420-PA | 148..289 | 75..215 | 465 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25265-PA | 278 | GM25265-PA | 38..278 | 1..241 | 1241 | 98.3 | Plus |
Dsec\GM25275-PA | 299 | GM25275-PA | 158..299 | 75..215 | 445 | 60.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14299-PA | 481 | GD14299-PA | 38..211 | 1..174 | 888 | 98.3 | Plus |
Dsim\GD14310-PA | 299 | GD14310-PA | 158..299 | 75..215 | 445 | 60.1 | Plus |
Dsim\GD14372-PA | 51 | GD14372-PA | 1..51 | 191..241 | 257 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11278-PA | 284 | GJ11278-PA | 111..283 | 69..240 | 650 | 76.3 | Plus |
Dvir\GJ11294-PA | 295 | GJ11294-PA | 125..288 | 43..213 | 464 | 54.9 | Plus |
Translation from 1424 to 2149
> LD22812.hyp MSKKAKTTTGGSSNGSNATATSTTTSTSSSIKHKQPAGSSNNNVGQSQSK KTKPSGSYNSNSNYYYYAADEEEGGSADYALSNYDKKAVEELSLRLLDEL RAAKSRHLTCTEVSLPCDLTPSVAREIIRVSEKEPRGIRGCTIYIEFEDE PKNSRRIASIKVDSDTVSTFEVYLTLRQDHRGWTSLLPQFMKSLARTITI SPEYTITKNKLYSADGLGARRSYSFGSHAHRPSAAIATPTN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
scyl-PC | 280 | CG7590-PC | 40..280 | 1..241 | 1230 | 100 | Plus |
scyl-PA | 280 | CG7590-PA | 40..280 | 1..241 | 1230 | 100 | Plus |
chrb-PE | 233 | CG7533-PE | 26..233 | 10..215 | 419 | 45.6 | Plus |
chrb-PC | 299 | CG7533-PC | 92..299 | 10..215 | 419 | 45.6 | Plus |