LD22825.complete Sequence
2165 bp (2165 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051677
> LD22825.complete
TCACTGGCTTGTTGTTATTGCTCAAATTTAAAAAGTGTAAATATCCTGAG
GAAAATTAAAAACACTTACATTAATTGCTTGAAAAATGAGTAGTATGGCT
AAATCGCCAGATATGCGAACTCCAGGGTGCTGCTCCCCCTTGCGTACAAA
GGAATTGCTGGAGAGACAAAGGTCCAGTAGGTGCACCCCCGCAAAAGGAT
ATCTAACCCCACGCAACTGCCAGAGCCCCAAACACCCAGAGATGCGGATA
CCTTCCATATTCGTTACCGATGCCGACTACGGCTTGGAGCGCCCGAAACA
ATTGCTACAGCGCCTGGAGCGATCACTATATCGATCTTCCTCTGCTTCCA
AAGTACCACCAAAACACTCATTGTTAGCTTCCCAGAACAGGCAGCGGACC
TGGGAAGGACCCAAAACACCAGAGTTCCGCCGTACCAACAAAACTATACC
CGCTTCGGAACCTCGTCCAAGACGTGCTAAGGAACTTCTGGAGGATCTTA
GGTCCAAGCATCAAGGAACTCCTGCCACGAAAATTCCGTCCCAGAGGAAT
CCAAAGGAAAACCAAGAACTTTCAAAGAGCCATACATGCATACCATCCTC
GGAGCCACAGCCTATCCGTCCAAAATTGATCCTCGAACGGGAGCGCCAGG
AGTCTATAACCAATCGCTTGGCATCAACTTCTATTGACCGCCTAAAAACA
AAGCCACCAAGGAGTAGCTTTACATCGAGCAGGCTTCTAGTGCCACAGAT
GGGATTTTCGTACCCCAAGGATCCGAAAAGGCTTCACGAATCCGACAAAG
GAATCAAGCTGACCACCTCAAAGCGAAAGTTGGACTTCAAAACTGAGCTG
GGGACTGACTGGCTGCGGCGGGAGCTGGAAAAGATTGGCAAGGAATGGCG
GAAAAAGACTGACTACCAGTTACGTCAGCTTATCTCGGGTTTTGTGAAAC
AACTAGTGCGCCTCCTACCCTTTAATGGGATAACATTTTCGCATCTTAGC
AGGGATTGCTATGTGCAGCAGATGGTGGAGGCACTGCAGCAGCTGCAGTA
CACCAAAAAGGTGAACAAAAGCTGGCTTCAAACGCCGAACAGCACACAAG
CCATCGCCCATGTGCTGGAATTACTCAATTTCTTGCTGGATGTCCTCGAA
CATCGAAAAGGAGAAGGCATGTGTGCGCTCCCCGTTGTTTCTGAAAAGCA
GAGAATTGAACAACTTGCATCGGCATCTGGTACATCCTATGATGTAATGA
GCCTGCAACAGAAGTTTGAAAACATAAAAATAGAGAAAGAAAGATTAAAC
AATTACCAAGAATCTCTGATGCCGGAATCCCCCGTATCCAAGGACATGGA
TAAAGTTACGGAGCGCGATGGGAATCAGGACTTCGTCAGACTCCTGGATT
TTCAAAAAGAGACCCTCCATGAACTCCAACTGCAACGCCTGCGTCTCCAG
GAGTTCTCCGAGCTCGTAAGCCTCGCCAAGATAAAATTAAAACGCTGTTG
TAAGGCTAACAAGCAATGCATCGAAGCCTTTAATGACCAAATACAAGACT
TGGCCGACTGTGTGGTTTTAAGAAACAGAAATATCGGCCTTCTAACCCAA
TTACATTTGAACGATAATCCAAAGGAGGAGGAGTTGCACGAACGTATGAA
GCAACTGCAGCGGCTGTATGAGGATAATTATTCAAATCTTCTACAGCTAA
ACATTAAGCCGCCCCAGGGAAGCCCTTAGGCGAACATAAGCCACATCCCT
CATTGAATGCCAGTTAATTTAAGCAAATATTTGCGTGTTGCATTTATTTA
ATTGAATTTATCAACTGAAAGTCTCGGCAACATCCTGGCCTGGATTTAAG
TTCGTGTAATTGACATTTAAATGAGTCATCGGCAGCCTGGCTACACTAAG
TCAATGGAAATAGCTGCAAAGTTAAGCAGCTTAGCTTTGATTTGCCAAAA
TATTTTAAATTGCACTACCATTTCATTGGTATATTTTGAGTTTTCCATTC
GTTATTTAAAGTTGCCATTATTGTCATACCAATGTATAGATTCCATATCA
AGCGGAATAAATAATACTTAAGGAGTCACTTTCATTTCGTAGCCAAATGG
ATTTTGTGAAATATTAACCATTAAAAAAAGTTGTATCAGTATAAAAAAAA
AAAAAAAAAAAAAAA
LD22825.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:33:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31672-RA | 2196 | CG31672-RA | 17..2160 | 1..2144 | 10720 | 100 | Plus |
CG31672.b | 2392 | CG31672.b | 251..2392 | 1..2142 | 10710 | 100 | Plus |
CG31672.a | 2314 | CG31672.a | 130..2276 | 1..2144 | 10665 | 99.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:24:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 2046126..2047339 | 578..1791 | 5995 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 2047404..2047748 | 1792..2136 | 1710 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 2045396..2045708 | 117..429 | 1520 | 99 | Plus |
chr2L | 23010047 | chr2L | 2045765..2045915 | 429..579 | 710 | 98 | Plus |
chr2L | 23010047 | chr2L | 2045222..2045338 | 1..117 | 510 | 95.7 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:12:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:24:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2046426..2047639 | 578..1791 | 6070 | 100 | Plus |
2L | 23513712 | 2L | 2047704..2048056 | 1792..2144 | 1765 | 100 | Plus |
2L | 23513712 | 2L | 2045699..2046011 | 117..429 | 1565 | 100 | Plus |
2L | 23513712 | 2L | 2046068..2046218 | 429..579 | 755 | 100 | Plus |
2L | 23513712 | 2L | 2045525..2045641 | 1..117 | 585 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:55:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2046426..2047639 | 578..1791 | 6070 | 100 | Plus |
2L | 23513712 | 2L | 2047704..2048056 | 1792..2144 | 1765 | 100 | Plus |
2L | 23513712 | 2L | 2045699..2046011 | 117..429 | 1565 | 100 | Plus |
2L | 23513712 | 2L | 2046068..2046218 | 429..579 | 755 | 100 | Plus |
2L | 23513712 | 2L | 2045525..2045641 | 1..117 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 18:24:54 has no hits.
LD22825.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:25:47 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 2045222..2045338 | 1..117 | 95 | -> | Plus |
chr2L | 2045397..2045708 | 118..429 | 99 | -> | Plus |
chr2L | 2045763..2045915 | 430..579 | 96 | -> | Plus |
chr2L | 2046128..2047339 | 580..1791 | 99 | -> | Plus |
chr2L | 2047404..2047751 | 1792..2142 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:22:29 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31672-RA | 1..1644 | 86..1729 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:02:39 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Kebab-RA | 1..1644 | 86..1729 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:55:09 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31672-RA | 1..1644 | 86..1729 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:53 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Kebab-RA | 1..1644 | 86..1729 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:19:48 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31672-RA | 1..2142 | 1..2142 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:22:29 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31672-RA | 1..2142 | 1..2142 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:02:39 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Kebab-RA | 32..2173 | 1..2142 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:55:09 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31672-RA | 1..2142 | 1..2142 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:53 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Kebab-RA | 32..2173 | 1..2142 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:25:47 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2045525..2045641 | 1..117 | 100 | -> | Plus |
2L | 2045700..2046011 | 118..429 | 100 | -> | Plus |
2L | 2046069..2046218 | 430..579 | 100 | -> | Plus |
2L | 2046428..2047639 | 580..1791 | 100 | -> | Plus |
2L | 2047704..2048054 | 1792..2142 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:25:47 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2045525..2045641 | 1..117 | 100 | -> | Plus |
2L | 2045700..2046011 | 118..429 | 100 | -> | Plus |
2L | 2046069..2046218 | 430..579 | 100 | -> | Plus |
2L | 2046428..2047639 | 580..1791 | 100 | -> | Plus |
2L | 2047704..2048054 | 1792..2142 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:25:47 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2045525..2045641 | 1..117 | 100 | -> | Plus |
2L | 2045700..2046011 | 118..429 | 100 | -> | Plus |
2L | 2046069..2046218 | 430..579 | 100 | -> | Plus |
2L | 2046428..2047639 | 580..1791 | 100 | -> | Plus |
2L | 2047704..2048054 | 1792..2142 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:02:39 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2046069..2046218 | 430..579 | 100 | -> | Plus |
arm_2L | 2047704..2048054 | 1792..2142 | 100 | | Plus |
arm_2L | 2045525..2045641 | 1..117 | 100 | -> | Plus |
arm_2L | 2045700..2046011 | 118..429 | 100 | -> | Plus |
arm_2L | 2046428..2047639 | 580..1791 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:32:52 Download gff for
LD22825.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2045525..2045641 | 1..117 | 100 | -> | Plus |
2L | 2046069..2046218 | 430..579 | 100 | -> | Plus |
2L | 2045700..2046011 | 118..429 | 100 | -> | Plus |
2L | 2046428..2047639 | 580..1791 | 100 | -> | Plus |
2L | 2047704..2048054 | 1792..2142 | 100 | | Plus |
LD22825.pep Sequence
Translation from 85 to 1728
> LD22825.pep
MSSMAKSPDMRTPGCCSPLRTKELLERQRSSRCTPAKGYLTPRNCQSPKH
PEMRIPSIFVTDADYGLERPKQLLQRLERSLYRSSSASKVPPKHSLLASQ
NRQRTWEGPKTPEFRRTNKTIPASEPRPRRAKELLEDLRSKHQGTPATKI
PSQRNPKENQELSKSHTCIPSSEPQPIRPKLILERERQESITNRLASTSI
DRLKTKPPRSSFTSSRLLVPQMGFSYPKDPKRLHESDKGIKLTTSKRKLD
FKTELGTDWLRRELEKIGKEWRKKTDYQLRQLISGFVKQLVRLLPFNGIT
FSHLSRDCYVQQMVEALQQLQYTKKVNKSWLQTPNSTQAIAHVLELLNFL
LDVLEHRKGEGMCALPVVSEKQRIEQLASASGTSYDVMSLQQKFENIKIE
KERLNNYQESLMPESPVSKDMDKVTERDGNQDFVRLLDFQKETLHELQLQ
RLRLQEFSELVSLAKIKLKRCCKANKQCIEAFNDQIQDLADCVVLRNRNI
GLLTQLHLNDNPKEEELHERMKQLQRLYEDNYSNLLQLNIKPPQGSP*
LD22825.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:48:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF14598-PA | 161 | GF14598-PA | 62..151 | 433..525 | 162 | 41.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:48:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG24826-PA | 538 | GG24826-PA | 1..538 | 4..547 | 2273 | 79.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Kebab-PA | 547 | CG31672-PA | 1..547 | 1..547 | 2831 | 100 | Plus |
Kebab-PB | 548 | CG31672-PB | 1..548 | 1..547 | 2819 | 99.8 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:48:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL15313-PA | 549 | GL15313-PA | 14..299 | 109..370 | 386 | 38.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:48:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA26055-PA | 549 | GA26055-PA | 14..299 | 109..370 | 372 | 38.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:48:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16850-PA | 547 | GM16850-PA | 1..547 | 1..547 | 2685 | 93.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:48:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD23129-PA | 547 | GD23129-PA | 1..547 | 1..547 | 2711 | 94 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:48:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE17911-PA | 543 | GE17911-PA | 1..543 | 4..547 | 2402 | 84.7 | Plus |
LD22825.hyp Sequence
Translation from 85 to 1728
> LD22825.hyp
MSSMAKSPDMRTPGCCSPLRTKELLERQRSSRCTPAKGYLTPRNCQSPKH
PEMRIPSIFVTDADYGLERPKQLLQRLERSLYRSSSASKVPPKHSLLASQ
NRQRTWEGPKTPEFRRTNKTIPASEPRPRRAKELLEDLRSKHQGTPATKI
PSQRNPKENQELSKSHTCIPSSEPQPIRPKLILERERQESITNRLASTSI
DRLKTKPPRSSFTSSRLLVPQMGFSYPKDPKRLHESDKGIKLTTSKRKLD
FKTELGTDWLRRELEKIGKEWRKKTDYQLRQLISGFVKQLVRLLPFNGIT
FSHLSRDCYVQQMVEALQQLQYTKKVNKSWLQTPNSTQAIAHVLELLNFL
LDVLEHRKGEGMCALPVVSEKQRIEQLASASGTSYDVMSLQQKFENIKIE
KERLNNYQESLMPESPVSKDMDKVTERDGNQDFVRLLDFQKETLHELQLQ
RLRLQEFSELVSLAKIKLKRCCKANKQCIEAFNDQIQDLADCVVLRNRNI
GLLTQLHLNDNPKEEELHERMKQLQRLYEDNYSNLLQLNIKPPQGSP*
LD22825.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:05:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Kebab-PA | 547 | CG31672-PA | 1..547 | 1..547 | 2831 | 100 | Plus |
Kebab-PB | 548 | CG31672-PB | 1..548 | 1..547 | 2819 | 99.8 | Plus |