Clone LD22829 Report

Search the DGRC for LD22829

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:228
Well:29
Vector:pOT2
Associated Gene/Transcriptcsw-RA
Protein status:LD22829.pep: gold
Sequenced Size:4516

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3954 2002-07-13 Blastp of sequenced clone
CG3954 2003-01-01 Sim4 clustering to Release 3
csw 2008-04-29 Release 5.5 accounting
csw 2008-08-15 Release 5.9 accounting
csw 2008-12-18 5.12 accounting

Clone Sequence Records

LD22829.complete Sequence

4516 bp (4516 high quality bases) assembled on 2002-07-13

GenBank Submission: BT001484

> LD22829.complete
ACCAACTGTAAAAATAAGTTTAAACAAAGCATCTACTCATAAGTTTCATT
TTTTTCCGTTAAGTGTCAACATTATTTATTTTTTAAGTGTGCATTCAATA
AGAAAATGTCATCGCGAAGATGGTTCCACCCAACGATATCTGGCATCGAA
GCTGAGAAACTGCTGCAGGAGCAGGGATTCGACGGCTCCTTCCTCGCCCG
CCTCTCCTCCTCGAATCCGGGCGCCTTCACGCTCTCCGTGCGCCGCGGCA
ACGAGGTGACCCACATCAAAATCCAAAACAATGGCGACTTCTTTGATCTC
TACGGTGGTGAAAAGTTCGCCACACTGCCGGAACTGGTACAATACTACAT
GGAGAATGGCGAGCTAAAGGAGAAGAACGGCCAGGCCATCGAACTCAAGC
AGCCGCTGATCTGCGCCGAGCCCACCACGGAAAGATGGTTTCATGGCAAT
CTTTCCGGAAAGGAAGCGGAAAAATTGATCCTGGAGCGGGGCAAGAATGG
TTCGTTTCTCGTCCGTGAATCTCAGAGCAAGCCTGGCGACTTCGTCCTTT
CCGTGCGCACGGACGACAAAGTAACGCATGTCATGATTCGATGGCAGGAC
AAGAAGTACGACGTCGGCGGCGGGGAATCCTTTGGCACCTTGTCGGAACT
GATCGATCACTACAAGCGTAATCCCATGGTGGAGACGTGCGGAACCGTGG
TGCATCTGCGACAGCCATTCAACGCCACACGAATCACGGCGGCCGGCATC
AATGCCCGGGTGGAACAGCTGGTCAAGGGAGGTTTCTGGGAGGAATTCGA
ATCGCTGCAACAGGACAGTCGGGACACATTCTCGCGCAACGAGGGCTACA
AACAGGAGAACCGCCTCAAGAATCGCTACCGCAACATATTGCCATACGAC
CACACGCGCGTCAAGCTGCTGGACGTGGAGCATAGCGTGGCCGGAGCCGA
GTACATCAATGCCAACTACATACGGCTGCCCACCGACGGCGACCTGTACA
ACATGAGCAGCTCGTCGGAGAGCCTGAACAGCTCGGTGCCCTCGTGCCCC
GCCTGCACGGCTGCCCAGACACAGCGGAACTGCTCCAACTGCCAGCTGCA
AAACAAGACGTGCGTGCAGTGCGCCGTGAAGAGCGCCATTCTGCCGTATA
GCAACTGTGCCACCTGCAGCCGCAAGTCAGACTCCCTGAGCAAGCACAAG
CGGAGCGAATCCTCGGCCTCTTCATCGCCCTCCTCCGGCTCTGGGTCCGG
ACCAGGATCGTCGGGCACCAGCGGAGTGAGCAGCGTCAATGGACCCGGCA
CACCCACCAATCTCACGAGCGGCACAGCCGGATGTCTGGTCGGCCTGCTG
AAGAGACACTCGAACGACTCGTCCGGAGCTGTTTCTATATCGATGGCCGA
ACGGGAACGCGAGAGGGAGCGCGAGATGTTTAAGACCTACATCGCCACCC
AGGGCTGTCTGCTCACCCAGCAAGTGAACACGGTGACGGACTTCTGGAAC
ATGGTCTGGCAGGAGAACACGCGGGTGATCGTCATGACCACCAAGGAGTA
CGAGCGCGGCAAAGAAAAGTGCGCCCGCTACTGGCCGGACGAGGGTAGAT
CGGAGCAGTTCGGCCACGCGCGGATACAGTGCGTCTCGGAGAACTCGACC
AGTGACTATACGCTGCGCGAGTTCCTCGTCTCGTGGCGGGATCAGCCGGC
GCGCCGGATCTTTCACTACCATTTCCAGGTGTGGCCGGATCACGGAGTGC
CCGCCGATCCGGGCTGTGTGCTCAACTTCCTGCAAGATGTCAACACGCGT
CAGAGTCACCTGGCTCAAGCGGGCGAGAAGCCGGGTCCGATCTGCGTGCA
CTGCTCTGCGGGCATCGGTCGCACTGGCACCTTTATTGTGATCGATATGA
TTCTCGATCAGATTGTGCGCAATGGATTGGATACTGAAATCGACATCCAG
CGCACCATTCAGATGGTCCGATCGCAGCGTTCCGGTCTTGTGCAAACCGA
GGCGCAATACAAGTTCGTCTACTATGCGGTGCAGCACTATATACAGACCC
TGATCGCCCGGAAACGAGCTGAGGAGCAGAGCCTGCAGGTTGGCCGCGAG
TACACCAATATAAAGTACACGGGCGAAATTGGAAACGATTCACAAAGATC
TCCATTACCACCAGCAATTTCTAGCATAAGTTTAGTTCCGAGTAAGACGC
CACTGACGCCGACATCGGCGGATTTGGGCACTGGGATGGGCCTAAGCATG
GGCGTGGGCATGGGCGTCGGCAACAAGCACGCATCGAAGCAGCAGCCGCC
GTTGCCGGTGGTCAACTGCAACAATAATAACAACGGCATTGGCAATAGCG
GCTGCAGCAACGGCGGCGGGAGCAGCACCACCAGCAGCAGCAACGGCAGC
AGCAACGGTAACATCAACGCCCTACTGGGCGGCATCGGCTTGGGGCTGGG
CGGCAATATGCGCAAGTCGAACTTTTACAGCGACTCGCTGAAGCAGCAAC
AGCAGCGCGAGGAGCAGGCTCCGGCGGGAGCAGCAAAATTCAAAAACATT
CCCAAAGACATGATCGGCTTGCGACCGCCAAGCCATGCGCCTGCGTTGCC
GCCGCCACCGACACCGCCGCGCAAAACATGACAAATGAATTTCTAAGTCG
CGACGCCCCCTTGACACGCCCCCTTGACACGCCCCCCTGACACCCACCTC
CCTCCACACGCACACAGACCACATATGGTTTTCATTTTAAATGTCACCCA
GCCGCCGCCCCAAACCCAAAACCCAATCCCTCGACTATGTTTTACTGTTG
TACCACGTTCTACGTTTTTTTTTTTTTTTATAATTGTAATCTATATACTT
TTTTGTAATTGTGTGTAATGTAATGTTTAGTTTTATGTTATTGTCTCGCT
TTATGTTGTAAGTGTTCCCTGCACACGAAAAGCAGTAACCCCACCACCAC
CCCAAAACCCAAAACCCAGCATATTTATGTAGTAGTATTGTAAGAATCCC
CGAACCGGTAGTTGAGGATACAATCTGGGCGGAACTGCAGCAGATCCGCC
AAAAAACAAAAACACATTTTTAAGCAGAATCGCAGCAACAAAATATAACA
CCCGTTCCCTGTTCCAAACCGCTTGAATTTGGTGGAATCGGCCTTGATAG
TATTTCACTTTCTTGAAAATATTCGCTTTAGATAAGAAAATTGACTTGTG
ACAAATATTTACATGTATTGCGCTGGTTACAAACCACAAAAGTTGCTTAA
CTTTAAATTTTACGAATCGACATTTATGATATTTCGCATGCTTGAAAATA
GTTGTAGTTTCCTATTTGGGAATCATTGAAAAATCCATTTATAAAGCGAA
ATCCAGTTCTGGCACGTTCAATTTGAATCGGTTAATTTCTAATCTAGTTG
GCGAAAAAGTGAAGAAAAGTGAAGTCCACCTCCTCCAAATTCAACTTGAA
ACGGAAACGGGTTACCGGTTGGAGTGCAAATAAAGTTTTTAGTGTAGTAA
GTGTTGACAAAATCGATAGAGAAGAAATTAGAGGAGTAACTGAGGCAGTA
AGCACGTAACGATAATGATACAAAAAGCGTTGATTGTGATTCGAGTGACA
GCGAGAACAGAAACTGAAACAGTAACAGTAACAGTAACAGATGAGAACAG
ATGCGAATGGGATCAGTACAGAACAGAACAGAACAGCGGAGACGCCAACC
GAACAGAACAGAAATGAACAGAAGAGAAGAGAACAGATTAGAGGTAAAAG
AAAAAGCTAAGAAGCGCTTAAGCGTGTCGTCCCTAGAATAAGAAAACTAA
TATTACAGCTCCACAGATCCAGATTCAGATCCAGATCTATATCTCTAGCA
GCCAATTTCTGATTTCCCCTTCCCTCTTAGTTTTCCCATTAATTTAGTGA
TTGTGTGTATATTTTTAATTGTATATTGAAGATTATTTATAGCGATTGTC
CATTGTGTTACATTTCAAATGTTCGAAAGAATTGTATTTAGAAAGTTTGT
ACTTTAGAAATTATGCATTAATTGTGTGTCTGTGTCTCTCTACCCAGTCT
CCCTATCTCTGTCTCTCTCTCTCTCTCTCCCTCACTGTCTATGCACGAGT
GTTTTCTTAACTAAGTTTATTATTTCAACGCTGAAGCGTAATCAAACTAT
ATATGCAATATTTAAGCACAGTACCTTGGGCGCTGCAAAGAAATTAAAAA
ATTTTAAAATAAAAACAAACTGCTAAATCATAAATACAAAATATATACAG
GAAGGAATAATAGCAGCGAAATGTAAATCAATTAGATTATTGTGCAAATT
TGAGTAATATATTTAAAACATACCCTTATTTTATCTTATTTAACTTTATG
CTTTTGTAAGTGCTTTAAATTGTTATTCATCTTGATCTTGCAAAAAAATG
AAAAAACCACAAAACTGAAAAACGAATACAAAACTAAAAAACAACACAAA
TTATATTTGTATTTATACAGAAAAATAAAACATTTTATATGCGATAAAAA
AAAAAAAAAAAAAAAA

LD22829.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:43:42
Subject Length Description Subject Range Query Range Score Percent Strand
csw.m 6432 csw.m 65..4561 1..4496 22445 99.9 Plus
csw.i 6490 csw.i 65..4561 1..4496 22445 99.9 Plus
csw-RA 4655 csw-RA 65..4561 1..4496 22445 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:53:23
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 2005627..2007592 2531..4495 9780 99.9 Plus
chrX 22417052 chrX 2003651..2004593 892..1834 4700 99.9 Plus
chrX 22417052 chrX 2005131..2005549 2115..2533 2095 100 Plus
chrX 22417052 chrX 2004875..2005067 1924..2116 965 100 Plus
chrX 22417052 chrX 1988946..1989137 118..309 960 100 Plus
chrX 22417052 chrX 2003153..2003341 590..778 930 99.5 Plus
chrX 22417052 chrX 2002304..2002469 433..598 830 100 Plus
chrX 22417052 chrX 1989207..1989334 307..434 640 100 Plus
chrX 22417052 chrX 2003407..2003526 776..895 600 100 Plus
chrX 22417052 chrX 1988238..1988356 1..119 595 100 Plus
chrX 22417052 chrX 2004670..2004762 1833..1925 465 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:12:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:53:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2111701..2113667 2531..4496 9785 99.9 Plus
X 23542271 X 2109725..2110667 892..1834 4700 99.9 Plus
X 23542271 X 2111205..2111623 2115..2533 2095 100 Plus
X 23542271 X 2110949..2111141 1924..2116 965 100 Plus
X 23542271 X 2095008..2095199 118..309 960 100 Plus
X 23542271 X 2109227..2109415 590..778 930 99.5 Plus
X 23542271 X 2108378..2108543 433..598 830 100 Plus
X 23542271 X 2095269..2095396 307..434 640 100 Plus
X 23542271 X 2109481..2109600 776..895 600 100 Plus
X 23542271 X 2094300..2094418 1..119 595 100 Plus
X 23542271 X 2110744..2110836 1833..1925 465 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 2119799..2121765 2531..4496 9795 99.9 Plus
X 23527363 X 2117823..2118765 892..1834 4700 99.8 Plus
X 23527363 X 2119303..2119721 2115..2533 2095 100 Plus
X 23527363 X 2119047..2119239 1924..2116 965 100 Plus
X 23527363 X 2103106..2103297 118..309 960 100 Plus
X 23527363 X 2117325..2117513 590..778 930 99.4 Plus
X 23527363 X 2116476..2116641 433..598 830 100 Plus
X 23527363 X 2103367..2103494 307..434 640 100 Plus
X 23527363 X 2117579..2117698 776..895 600 100 Plus
X 23527363 X 2102398..2102516 1..119 595 100 Plus
X 23527363 X 2118842..2118934 1833..1925 465 100 Plus
Blast to na_te.dros performed 2019-03-15 15:53:22
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy7 5486 gypsy7 GYPSY7 5486bp 4944..5119 4188..4359 160 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6884 2380..2568 153 59.8 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3252..3382 2287..2417 123 56.8 Plus
Dwil\Vege 884 Dwil\Vege VEGE 884bp Derived from AF518730. 316..387 4083..4155 119 64.4 Plus

LD22829.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:54:46 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 2003161..2003340 598..777 100 -> Plus
chrX 2003409..2003526 778..895 100 -> Plus
chrX 1988238..1988356 1..119 100 -> Plus
chrX 1988948..1989135 120..307 100 -> Plus
chrX 1989208..1989334 308..434 100 -> Plus
chrX 2002306..2002468 435..597 100 -> Plus
chrX 2003655..2004592 896..1833 100 -> Plus
chrX 2004671..2004761 1834..1924 100 -> Plus
chrX 2004876..2005065 1925..2114 100 -> Plus
chrX 2005131..2005333 2115..2317 100 == Plus
chrX 2005435..2005549 2419..2533 100 -> Plus
chrX 2005630..2006760 2534..3663 98 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:38:03 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RA 1..2526 106..2631 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:17:15 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RA 1..2526 106..2631 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:45:30 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RA 1..2526 106..2631 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:08:25 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RA 1..2526 106..2631 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:20:26 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RA 1..2526 106..2631 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:38:03 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RA 65..4558 1..4493 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:17:15 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RA 65..4558 1..4493 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:30 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RA 67..4561 1..4494 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:08:25 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RA 65..4558 1..4493 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:20:26 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
csw-RA 67..4560 1..4493 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:46 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
X 2095010..2095197 120..307 100 -> Plus
X 2095270..2095396 308..434 100 -> Plus
X 2094300..2094418 1..119 100 -> Plus
X 2108380..2108542 435..597 100 -> Plus
X 2109235..2109414 598..777 100 -> Plus
X 2109483..2109600 778..895 100 -> Plus
X 2109729..2110666 896..1833 100 -> Plus
X 2110745..2110835 1834..1924 100 -> Plus
X 2110950..2111139 1925..2114 100 -> Plus
X 2111205..2111623 2115..2533 100 -> Plus
X 2111704..2113666 2534..4495 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:46 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
X 2095010..2095197 120..307 100 -> Plus
X 2095270..2095396 308..434 100 -> Plus
X 2094300..2094418 1..119 100 -> Plus
X 2108380..2108542 435..597 100 -> Plus
X 2109235..2109414 598..777 100 -> Plus
X 2109483..2109600 778..895 100 -> Plus
X 2109729..2110666 896..1833 100 -> Plus
X 2110745..2110835 1834..1924 100 -> Plus
X 2110950..2111139 1925..2114 100 -> Plus
X 2111205..2111623 2115..2533 100 -> Plus
X 2111704..2113666 2534..4495 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:46 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
X 2095010..2095197 120..307 100 -> Plus
X 2095270..2095396 308..434 100 -> Plus
X 2094300..2094418 1..119 100 -> Plus
X 2108380..2108542 435..597 100 -> Plus
X 2109235..2109414 598..777 100 -> Plus
X 2109483..2109600 778..895 100 -> Plus
X 2109729..2110666 896..1833 100 -> Plus
X 2110745..2110835 1834..1924 100 -> Plus
X 2110950..2111139 1925..2114 100 -> Plus
X 2111205..2111623 2115..2533 100 -> Plus
X 2111704..2113666 2534..4495 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:30 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1988333..1988451 1..119 100 -> Plus
arm_X 1989043..1989230 120..307 100 -> Plus
arm_X 1989303..1989429 308..434 100 -> Plus
arm_X 2002413..2002575 435..597 100 -> Plus
arm_X 2003268..2003447 598..777 100 -> Plus
arm_X 2003516..2003633 778..895 100 -> Plus
arm_X 2003762..2004699 896..1833 100 -> Plus
arm_X 2004778..2004868 1834..1924 100 -> Plus
arm_X 2004983..2005172 1925..2114 100 -> Plus
arm_X 2005238..2005656 2115..2533 100 -> Plus
arm_X 2005737..2007699 2534..4495 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:40:23 Download gff for LD22829.complete
Subject Subject Range Query Range Percent Splice Strand
X 2117827..2118764 896..1833 100 -> Plus
X 2118843..2118933 1834..1924 100 -> Plus
X 2119048..2119237 1925..2114 100 -> Plus
X 2119303..2119721 2115..2533 100 -> Plus
X 2119802..2121764 2534..4495 99   Plus
X 2102398..2102516 1..119 100 -> Plus
X 2103108..2103295 120..307 100 -> Plus
X 2103368..2103494 308..434 100 -> Plus
X 2116478..2116640 435..597 100 -> Plus
X 2117333..2117512 598..777 100 -> Plus
X 2117581..2117698 778..895 100 -> Plus

LD22829.pep Sequence

Translation from 105 to 2630

> LD22829.pep
MSSRRWFHPTISGIEAEKLLQEQGFDGSFLARLSSSNPGAFTLSVRRGNE
VTHIKIQNNGDFFDLYGGEKFATLPELVQYYMENGELKEKNGQAIELKQP
LICAEPTTERWFHGNLSGKEAEKLILERGKNGSFLVRESQSKPGDFVLSV
RTDDKVTHVMIRWQDKKYDVGGGESFGTLSELIDHYKRNPMVETCGTVVH
LRQPFNATRITAAGINARVEQLVKGGFWEEFESLQQDSRDTFSRNEGYKQ
ENRLKNRYRNILPYDHTRVKLLDVEHSVAGAEYINANYIRLPTDGDLYNM
SSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSN
CATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTP
TNLTSGTAGCLVGLLKRHSNDSSGAVSISMAEREREREREMFKTYIATQG
CLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERGKEKCARYWPDEGRSE
QFGHARIQCVSENSTSDYTLREFLVSWRDQPARRIFHYHFQVWPDHGVPA
DPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMIL
DQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLI
ARKRAEEQSLQVGREYTNIKYTGEIGNDSQRSPLPPAISSISLVPSKTPL
TPTSADLGTGMGLSMGVGMGVGNKHASKQQPPLPVVNCNNNNNGIGNSGC
SNGGGSSTTSSSNGSSNGNINALLGGIGLGLGGNMRKSNFYSDSLKQQQQ
REEQAPAGAAKFKNIPKDMIGLRPPSHAPALPPPPTPPRKT*

LD22829.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21460-PA 985 GF21460-PA 210..856 110..735 2736 85.5 Plus
Dana\GF21458-PA 110 GF21458-PA 1..110 1..110 583 98.2 Plus
Dana\GF14429-PA 2028 GF14429-PA 1802..2020 412..646 399 36.9 Plus
Dana\GF22421-PA 874 GF22421-PA 649..851 445..645 397 41 Plus
Dana\GF19443-PA 1997 GF19443-PA 1373..1587 443..677 387 36.4 Plus
Dana\GF14429-PA 2028 GF14429-PA 1541..1729 445..646 349 38.4 Plus
Dana\GF21460-PA 985 GF21460-PA 210..305 5..101 235 47.4 Plus
Dana\GF21458-PA 110 GF21458-PA 2..101 107..205 229 46 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:36:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12908-PA 965 GG12908-PA 218..965 111..841 3819 95.9 Plus
Dere\GG12906-PA 220 GG12906-PA 52..155 6..109 564 100 Plus
Dere\GG18966-PA 833 GG18966-PA 608..810 445..645 395 41 Plus
Dere\GG21203-PA 2028 GG21203-PA 1802..2020 412..646 390 36 Plus
Dere\GG18436-PA 1978 GG18436-PA 1339..1550 443..674 384 36.5 Plus
Dere\GG21203-PA 2028 GG21203-PA 1541..1729 445..646 349 38.4 Plus
Dere\GG12908-PA 965 GG12908-PA 218..312 6..101 230 47.9 Plus
Dere\GG12906-PA 220 GG12906-PA 52..147 111..205 225 47.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:36:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24579-PA 1030 GH24579-PA 259..879 111..728 2488 75.6 Plus
Dgri\GH24578-PA 113 GH24578-PA 1..109 1..109 566 96.3 Plus
Dgri\GH13826-PA 2039 GH13826-PA 1813..2031 412..646 396 36.4 Plus
Dgri\GH12435-PA 837 GH12435-PA 612..814 445..645 394 40.5 Plus
Dgri\GH12596-PA 1990 GH12596-PA 1355..1533 443..635 378 39.4 Plus
Dgri\GH13826-PA 2039 GH13826-PA 1552..1736 445..642 350 38.7 Plus
Dgri\GH24579-PA 1030 GH24579-PA 259..353 6..101 232 47.9 Plus
Dgri\GH24578-PA 113 GH24578-PA 2..99 107..203 226 45.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:42
Subject Length Description Subject Range Query Range Score Percent Strand
csw-PA 841 CG3954-PA 1..841 1..841 4433 100 Plus
csw-PD 894 CG3954-PD 59..894 6..841 4410 100 Plus
csw-PB 945 CG3954-PB 211..922 111..839 3687 96.7 Plus
csw-PC 682 CG3954-PC 1..682 160..841 3604 100 Plus
Ptpmeg2-PH 498 CG32697-PH 273..475 445..645 381 41 Plus
Ptpmeg2-PI 498 CG32697-PI 273..475 445..645 381 41 Plus
Ptpmeg2-PE 498 CG32697-PE 273..475 445..645 381 41 Plus
Ptpmeg2-PD 498 CG32697-PD 273..475 445..645 381 41 Plus
Ptpmeg2-PF 597 CG32697-PF 372..574 445..645 381 41 Plus
Ptpmeg2-PG 790 CG32697-PG 565..767 445..645 381 41 Plus
Ptpmeg2-PC 797 CG32697-PC 572..774 445..645 381 41 Plus
Ptpmeg2-PB 802 CG32697-PB 577..779 445..645 381 41 Plus
Ptpmeg2-PA 827 CG32697-PA 602..804 445..645 381 41 Plus
Ptp10D-PG 1990 CG1817-PG 1339..1684 443..806 381 30.1 Plus
Ptp10D-PF 1990 CG1817-PF 1339..1684 443..806 381 30.1 Plus
Lar-PD 1912 CG10443-PD 1692..1904 418..646 372 36.1 Plus
Lar-PH 1927 CG10443-PH 1707..1919 418..646 372 36.1 Plus
Lar-PG 1935 CG10443-PG 1715..1927 418..646 372 36.1 Plus
Lar-PI 1941 CG10443-PI 1721..1933 418..646 372 36.1 Plus
Lar-PB 2011 CG10443-PB 1791..2003 418..646 372 36.1 Plus
Lar-PA 2029 CG10443-PA 1809..2021 418..646 372 36.1 Plus
Lar-PF 2032 CG10443-PF 1812..2024 418..646 372 36.1 Plus
Ptp10D-PB 1631 CG1817-PB 1339..1550 443..674 364 35.6 Plus
Ptp10D-PH 1653 CG1817-PH 1361..1572 443..674 364 35.6 Plus
Ptp10D-PI 1558 CG1817-PI 1339..1540 443..665 360 35.9 Plus
Ptp10D-PE 1558 CG1817-PE 1339..1540 443..665 360 35.9 Plus
Ptp99A-PG 922 CG11516-PG 173..424 445..702 356 32.7 Plus
Ptp99A-PA 1226 CG11516-PA 548..799 445..702 356 32.7 Plus
Ptp99A-PC 1241 CG11516-PC 563..814 445..702 356 32.7 Plus
Ptp99A-PB 1297 CG11516-PB 548..799 445..702 356 32.7 Plus
Ptp99A-PF 1397 CG11516-PF 719..970 445..702 356 32.7 Plus
Ptp61F-PC 530 CG9181-PC 73..361 414..729 343 31.1 Plus
Ptp61F-PB 535 CG9181-PB 78..366 414..729 343 31.1 Plus
Ptp61F-PA 548 CG9181-PA 78..366 414..729 343 31.1 Plus
Ptp4E-PB 1607 CG6899-PB 1396..1578 443..639 343 37.1 Plus
Ptp4E-PG 1615 CG6899-PG 1396..1578 443..639 343 37.1 Plus
Ptp4E-PH 1761 CG6899-PH 1396..1578 443..639 343 37.1 Plus
Ptp4E-PF 1767 CG6899-PF 1396..1578 443..639 343 37.1 Plus
Ptp4E-PD 1767 CG6899-PD 1396..1578 443..639 343 37.1 Plus
Ptp4E-PC 1767 CG6899-PC 1396..1578 443..639 343 37.1 Plus
Ptp4E-PA 1767 CG6899-PA 1396..1578 443..639 343 37.1 Plus
IA-2-PD 1306 CG31795-PD 1018..1213 445..650 338 37 Plus
IA-2-PE 1318 CG31795-PE 1030..1225 445..650 338 37 Plus
IA-2-PC 1319 CG31795-PC 1031..1226 445..650 338 37 Plus
Lar-PD 1912 CG10443-PD 1425..1609 445..642 329 38.7 Plus
Lar-PH 1927 CG10443-PH 1440..1624 445..642 329 38.7 Plus
Lar-PG 1935 CG10443-PG 1448..1632 445..642 329 38.7 Plus
Lar-PI 1941 CG10443-PI 1454..1638 445..642 329 38.7 Plus
Lar-PB 2011 CG10443-PB 1524..1708 445..642 329 38.7 Plus
Lar-PA 2029 CG10443-PA 1542..1726 445..642 329 38.7 Plus
Lar-PF 2032 CG10443-PF 1545..1729 445..642 329 38.7 Plus
Ptp69D-PB 1461 CG10975-PB 959..1152 443..642 329 34.8 Plus
Ptp69D-PA 1462 CG10975-PA 960..1153 443..642 329 34.8 Plus
Ptp52F-PB 1433 CG18243-PB 1164..1356 443..652 308 36 Plus
Ptp61F-PE 431 CG9181-PE 1..249 466..729 295 30 Plus
Ptp61F-PD 431 CG9181-PD 1..249 466..729 295 30 Plus
Ptpmeg-PK 974 CG1228-PK 711..951 445..638 292 32.5 Plus
Ptpmeg-PJ 974 CG1228-PJ 711..951 445..638 292 32.5 Plus
Ptp69D-PB 1461 CG10975-PB 1266..1449 458..645 230 29.3 Plus
Ptp69D-PA 1462 CG10975-PA 1267..1450 458..645 230 29.3 Plus
csw-PD 894 CG3954-PD 160..257 2..100 229 47.5 Plus
csw-PB 945 CG3954-PB 211..304 6..100 222 48.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:36:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15283-PA 952 GI15283-PA 203..925 110..822 2643 72.2 Plus
Dmoj\GI15283-PA 952 GI15283-PA 1..110 1..110 566 94.5 Plus
Dmoj\GI14758-PA 799 GI14758-PA 574..776 445..645 402 41.4 Plus
Dmoj\GI20182-PA 2025 GI20182-PA 1799..2017 412..646 398 36.9 Plus
Dmoj\GI16226-PA 1656 GI16226-PA 1358..1536 443..635 378 39.4 Plus
Dmoj\GI10407-PA 1342 GI10407-PA 573..781 445..657 368 36.8 Plus
Dmoj\GI20182-PA 2025 GI20182-PA 1538..1726 445..646 349 38.4 Plus
Dmoj\GI15283-PA 952 GI15283-PA 2..114 107..218 224 41.6 Plus
Dmoj\GI15283-PA 952 GI15283-PA 203..298 5..101 219 44.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:36:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18228-PA 995 GL18228-PA 232..964 111..828 3023 82.4 Plus
Dper\GL18226-PA 431 GL18226-PA 325..431 4..110 574 98.1 Plus
Dper\GL26255-PA 2029 GL26255-PA 1802..2020 412..646 400 36.9 Plus
Dper\GL13110-PA 906 GL13110-PA 260..471 443..674 382 36.5 Plus
Dper\GL13888-PA 1213 GL13888-PA 540..748 445..657 374 37.2 Plus
Dper\GL26255-PA 2029 GL26255-PA 1541..1725 445..642 350 38.7 Plus
Dper\GL18226-PA 431 GL18226-PA 309..422 93..205 240 43 Plus
Dper\GL18228-PA 995 GL18228-PA 232..326 6..101 235 49 Plus
Dper\GL13888-PA 1213 GL13888-PA 794..962 409..596 165 25.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:36:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27851-PA 981 GA27851-PA 234..950 111..828 2918 80.4 Plus
Dpse\GA27833-PA 155 GA27833-PA 1..110 1..110 587 99.1 Plus
Dpse\GA28096-PA 2029 GA28096-PA 1802..2020 412..646 400 36.9 Plus
Dpse\GA22312-PA 850 GA22312-PA 625..827 445..645 395 41 Plus
Dpse\GA14821-PA 1955 GA14821-PA 1312..1523 443..674 383 36.5 Plus
Dpse\GA28096-PA 2029 GA28096-PA 1541..1725 445..642 350 38.7 Plus
Dpse\GA27851-PA 981 GA27851-PA 234..328 6..101 235 49 Plus
Dpse\GA27833-PA 155 GA27833-PA 2..101 107..205 234 47 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:36:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19198-PA 939 GM19198-PA 209..939 111..841 3942 99.3 Plus
Dsec\GM19196-PA 122 GM19196-PA 1..112 1..112 594 98.2 Plus
Dsec\GM11354-PA 802 GM11354-PA 577..779 445..645 395 41 Plus
Dsec\GM17375-PA 598 GM17375-PA 372..590 412..646 391 36 Plus
Dsec\GM13099-PA 1977 GM13099-PA 1340..1551 443..674 384 36.5 Plus
Dsec\GM19196-PA 122 GM19196-PA 2..101 107..205 236 47 Plus
Dsec\GM19198-PA 939 GM19198-PA 209..303 6..101 230 47.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:36:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24731-PA 366 GD24731-PA 209..362 111..264 851 100 Plus
Dsim\csw-PA 248 GD16586-PA 1..216 598..813 849 97.7 Plus
Dsim\GD24230-PA 2043 GD24230-PA 1817..2035 412..646 390 36 Plus
Dsim\GD21436-PA 878 GD21436-PA 548..738 445..642 370 38 Plus
Dsim\GD16715-PA 1759 GD16715-PA 1401..1579 443..635 366 37.8 Plus
Dsim\GD24230-PA 2043 GD24230-PA 1556..1744 445..646 348 38.4 Plus
Dsim\GD24731-PA 366 GD24731-PA 209..303 6..101 227 47.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:36:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\csw-PA 994 GJ16938-PA 226..971 111..823 2570 71.3 Plus
Dvir\GJ16937-PA 129 GJ16937-PA 21..129 2..110 555 94.5 Plus
Dvir\GJ13567-PA 2025 GJ13567-PA 1799..2017 412..646 398 36.9 Plus
Dvir\GJ19159-PA 858 GJ19159-PA 633..835 445..645 395 40.5 Plus
Dvir\GJ15918-PA 1825 GJ15918-PA 1351..1529 443..635 378 39.4 Plus
Dvir\GJ13567-PA 2025 GJ13567-PA 1538..1726 445..646 348 38.4 Plus
Dvir\csw-PA 994 GJ16938-PA 226..320 6..101 232 47.9 Plus
Dvir\GJ16937-PA 129 GJ16937-PA 18..120 101..205 228 45.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:36:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25739-PA 983 GK25739-PA 220..864 110..734 2641 82.8 Plus
Dwil\GK25736-PA 116 GK25736-PA 1..110 1..110 587 99.1 Plus
Dwil\GK14922-PA 2033 GK14922-PA 1807..2025 412..646 395 36.4 Plus
Dwil\GK25577-PA 828 GK25577-PA 603..805 445..645 392 41 Plus
Dwil\GK25195-PA 1635 GK25195-PA 1338..1539 443..665 381 36.8 Plus
Dwil\GK14922-PA 2033 GK14922-PA 1546..1734 445..646 348 38.4 Plus
Dwil\GK25739-PA 983 GK25739-PA 216..392 1..174 244 35.4 Plus
Dwil\GK25736-PA 116 GK25736-PA 2..101 107..205 233 47 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:36:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16236-PA 966 GE16236-PA 217..966 111..841 3807 95.5 Plus
Dyak\GE16234-PA 110 GE16234-PA 1..110 1..110 590 100 Plus
Dyak\GE15440-PA 830 GE15440-PA 605..807 445..645 394 41 Plus
Dyak\GE13277-PA 2028 GE13277-PA 1802..2020 412..646 391 36 Plus
Dyak\GE15658-PA 1970 GE15658-PA 1339..1550 443..674 384 36.5 Plus
Dyak\GE13277-PA 2028 GE13277-PA 1541..1729 445..646 349 38.4 Plus
Dyak\GE16234-PA 110 GE16234-PA 2..101 107..205 234 47 Plus
Dyak\GE16236-PA 966 GE16236-PA 217..311 6..101 230 47.9 Plus

LD22829.hyp Sequence

Translation from 105 to 2630

> LD22829.hyp
MSSRRWFHPTISGIEAEKLLQEQGFDGSFLARLSSSNPGAFTLSVRRGNE
VTHIKIQNNGDFFDLYGGEKFATLPELVQYYMENGELKEKNGQAIELKQP
LICAEPTTERWFHGNLSGKEAEKLILERGKNGSFLVRESQSKPGDFVLSV
RTDDKVTHVMIRWQDKKYDVGGGESFGTLSELIDHYKRNPMVETCGTVVH
LRQPFNATRITAAGINARVEQLVKGGFWEEFESLQQDSRDTFSRNEGYKQ
ENRLKNRYRNILPYDHTRVKLLDVEHSVAGAEYINANYIRLPTDGDLYNM
SSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSN
CATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTP
TNLTSGTAGCLVGLLKRHSNDSSGAVSISMAEREREREREMFKTYIATQG
CLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERGKEKCARYWPDEGRSE
QFGHARIQCVSENSTSDYTLREFLVSWRDQPARRIFHYHFQVWPDHGVPA
DPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMIL
DQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLI
ARKRAEEQSLQVGREYTNIKYTGEIGNDSQRSPLPPAISSISLVPSKTPL
TPTSADLGTGMGLSMGVGMGVGNKHASKQQPPLPVVNCNNNNNGIGNSGC
SNGGGSSTTSSSNGSSNGNINALLGGIGLGLGGNMRKSNFYSDSLKQQQQ
REEQAPAGAAKFKNIPKDMIGLRPPSHAPALPPPPTPPRKT*

LD22829.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:37:11
Subject Length Description Subject Range Query Range Score Percent Strand
csw-PA 841 CG3954-PA 1..841 1..841 4433 100 Plus
csw-PD 894 CG3954-PD 59..894 6..841 4410 100 Plus
csw-PB 945 CG3954-PB 211..922 111..839 3687 96.7 Plus
csw-PC 682 CG3954-PC 1..682 160..841 3604 100 Plus
l(1)G0232-PH 498 CG32697-PH 273..475 445..645 381 41 Plus
csw-PD 894 CG3954-PD 160..257 2..100 229 47.5 Plus
csw-PB 945 CG3954-PB 211..304 6..100 222 48.4 Plus