BDGP Sequence Production Resources |
Search the DGRC for LD22866
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 228 |
Well: | 66 |
Vector: | pOT2 |
Associated Gene/Transcript | ric8a-RA |
Protein status: | LD22866.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2440 |
Gene | Date | Evidence |
---|---|---|
CG15797 | 2001-01-01 | Release 2 assignment |
CG15797 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15797 | 2003-02-22 | Blastp of sequenced clone |
ric8a | 2008-04-29 | Release 5.5 accounting |
ric8a | 2008-08-15 | Release 5.9 accounting |
ric8a | 2008-12-18 | 5.12 accounting |
2440 bp (2440 high quality bases) assembled on 2003-02-22
GenBank Submission: BT004873
> LD22866.complete GCAAAGGTGCGGTCACACTGGCGGAAATTATAAAAATTAATTAAATTAAC TTAAACGACCTAAAAAGCGAACTCAACGACAGCTTTGAACGGCCACCGTT GGCGACATGGAAACGGAGCACCTGAAACGACTAGAGGCCAAGGAGGCGGA CCACATTCCCGCCATCCTGGACGAATTCAACACAAAGAATGCGGATCTGC TGGTCTTCGACAGTTTCCGCACAGACAACCTGTGGCACGAACTGTGGCTG GCCATCTTCGGCATATTGGACGACCAGCGGCTTAGTCATCTGCATACGCA GTGCCTGAACACGGTGAGGATTCTAACGCGTGACGAGTTCAGCCTGCAGA CGAACTACATCGAACAGGAGGTTAACACCCTGCTGAAGCTGGCTAGGATT GAGGCCGGCTCACTAAAGCTGCCAGCCACGCCGGACGAGCTTAAACAGGA GGAACGCGAGGAGCCCCAGCTGGAGCCCAGCCAGGCCCAATCGGAGGTGA TTGCCGAAGCACTTAAGTGTCTGTGCAACTTGGTCTACCAGAGCTCCGAC TGCAGGCGCCAGTGCCTGCGGCAACACTGCCTGGATGCAATCCTGAAGAG GGTGGCGTCCTCGATGCGACATCCCTGTGCGTTGGAGTACTACGACATGA AGCTCCTCTTCTTGCTCACTGCATTAGAGCCAGCGGCGCGCTCTCGCCTC CAAATCGATCTGAATGGCCTCACCTACATGACTAAGTGGCTGGACGACAA GCTGGGCGAAGACTCAGTTGGCGAGGAGCAGCTGAACATCATCTGCGAAC TGCTCAAGGTGATGTTCAACGTGACCAGTGCTCCGGACAAGAGCCCCAAC GAATACGAAATCCAGAGCTTGCATTTGACGGGAGTGCTGAGGGAGCTACT CCTGCGTTTCGGCGACTTGGCCACAGAAAAGGATCGCGCCGTCGTCACAC ACGCCATCAATCTGCTGACAAACATCTCCGGCAGCTGCCTGACAGAACTC ACCCTGCGTTGCTCCAATGCCGAGTTGGAGTCGCACAAGGAAAGAGAGCA GGACAACGAGAAGGAAAAAGATACAGAAGCTGGAGCGGGAGCCAAACCCC GTGAGTGCTGCTCGCAGTGCTTCGAAAAGCGCAATGTTCGGAGTCTGGAC GTGCTACTCCGCTACCTAAGGCAATCTCTGGCCCAACAGGAGGCCGAGGC TAGCTCGCATGAGTTGCTTTCCCCAGTGCTGACCGTGCTGGTGAAATGTG CGCGCAGCGATCGAGTTATGCGTCACTATCTACGCCAGGAGATTCTGCCG CCGCTGCGGGACGTTAGTCAACGACCTGAGGTTGGTCAGGAGCTGCGCAA TCATCTGTGTCGGTTCCTTACACTGCCCGCGATGATCCTACGAGATCTGT CCGCCGAACTGCTGTTCGTACTGTGCAAAGAAAATGTCGGCAGGATGATC AAATATACGGGCTATGGCAACGCAGCCGGGCTCTTTGCCAAGCGGGGTAT ACTCGACTGCCGGCGAGTGGAGGGCACCGACTACTCCTCCGACAGCGAGG ACAGCGACACCGAGGAGTACAAGCAGCAGCAGCAGGGCATCAATCCAGTC CTTGGCTGCGTAGAGCCGCGCAGCAAGTCGCATCTGGACGACATAAGCGA AGAGCAGAAGGAATACGAGGCTATGCAGCTGGTCAATCTCATCGAACAGC TGCGTCAGGGCGGGATCGTAAAGCCGGCGATGATAGACAAGGACGGGCGC CCGCAGCCGCTGGAACACATCCTTCAGCTGCAGGAGGAGCTGCCGCAGCA GCAGCTCGACCAGAAGCGGAAAACCTAAGCCACAAATGTATTGCGGGATC TGCTATGGCACAACTTCCAAATAGCTACCAAAAAATCACCTTAAACTCTG CATTTATTCCATAAGTTTACTGTCGAATGTAGCTTCGAATGTGTTCAAAA AGCAGATTTTTTTTTTTACATAGTTTATATATTTTATACCACATATTCGA GAACATCTCATTATAACCTACAATTTGTTAACCAAAAATTATCCAATCTG GCTTTGATTTCAGTGATCAGCTTTTGTCTAAATGCCATTATTATTAGTGT TAGCTAAAATAATTATAATCTATCCAATTAGCTTCAATTCGTAGATAAGT TCGGTCTCCCAACTTTTACAGAATTTCTTTAACCATTAACCATGTAGAAC GTTGTACTTATTAAGTTATTACGCACTTCGTTGTTATTTTGTTGTCCCGT GAATTGTTCGCACTTTTAAAGTTGATACCATGGCATCCCATAACGTACGG CTTGAAAAAAATAACTAAATGCAAAACAATCGTTGGGGTCTTCCAATTTC AGGAAGTAGGGAGCAGATGAACATCAAATCTGAATTCATTTAAATACACG CCCACACTATAGGACAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9148264..9150492 | 186..2415 | 11100 | 100 | Plus |
chrX | 22417052 | chrX | 9152576..9153057 | 893..1374 | 2335 | 99 | Plus |
chrX | 22417052 | chrX | 9148014..9148200 | 1..187 | 935 | 100 | Plus |
chrX | 22417052 | chrX | 9152474..9152584 | 695..805 | 465 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 9256441..9258672 | 186..2417 | 11160 | 100 | Plus |
X | 23542271 | X | 9260754..9261235 | 893..1374 | 2335 | 99 | Plus |
X | 23542271 | X | 9256191..9256377 | 1..187 | 935 | 100 | Plus |
X | 23542271 | X | 9260652..9260762 | 695..805 | 465 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 9264539..9266770 | 186..2417 | 11160 | 100 | Plus |
X | 23527363 | X | 9268852..9269333 | 893..1374 | 2335 | 98.9 | Plus |
X | 23527363 | X | 9264289..9264475 | 1..187 | 935 | 100 | Plus |
X | 23527363 | X | 9268750..9268860 | 695..805 | 465 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2301..2396 | 1742..1835 | 123 | 61.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9148266..9150492 | 188..2415 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8a-RA | 1..1722 | 107..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8a-RA | 1..1722 | 107..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8a-RA | 1..1722 | 107..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8a-RA | 1..1722 | 107..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8a-RA | 1..1722 | 107..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8b-RA | 72..557 | 887..1374 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8a-RA | 1..2415 | 1..2415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8a-RA | 15..2429 | 1..2415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8a-RA | 24..2438 | 1..2415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8a-RA | 1..2415 | 1..2415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ric8a-RA | 24..2438 | 1..2415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9256191..9256377 | 1..187 | 100 | -> | Plus |
X | 9256443..9258670 | 188..2415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9256191..9256377 | 1..187 | 100 | -> | Plus |
X | 9256443..9258670 | 188..2415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9256191..9256377 | 1..187 | 100 | -> | Plus |
X | 9256443..9258670 | 188..2415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9150224..9150410 | 1..187 | 100 | -> | Plus |
arm_X | 9150476..9152703 | 188..2415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9264541..9266768 | 188..2415 | 100 | Plus | |
X | 9264289..9264475 | 1..187 | 100 | -> | Plus |
Translation from 106 to 1827
> LD22866.hyp METEHLKRLEAKEADHIPAILDEFNTKNADLLVFDSFRTDNLWHELWLAI FGILDDQRLSHLHTQCLNTVRILTRDEFSLQTNYIEQEVNTLLKLARIEA GSLKLPATPDELKQEEREEPQLEPSQAQSEVIAEALKCLCNLVYQSSDCR RQCLRQHCLDAILKRVASSMRHPCALEYYDMKLLFLLTALEPAARSRLQI DLNGLTYMTKWLDDKLGEDSVGEEQLNIICELLKVMFNVTSAPDKSPNEY EIQSLHLTGVLRELLLRFGDLATEKDRAVVTHAINLLTNISGSCLTELTL RCSNAELESHKEREQDNEKEKDTEAGAGAKPRECCSQCFEKRNVRSLDVL LRYLRQSLAQQEAEASSHELLSPVLTVLVKCARSDRVMRHYLRQEILPPL RDVSQRPEVGQELRNHLCRFLTLPAMILRDLSAELLFVLCKENVGRMIKY TGYGNAAGLFAKRGILDCRRVEGTDYSSDSEDSDTEEYKQQQQGINPVLG CVEPRSKSHLDDISEEQKEYEAMQLVNLIEQLRQGGIVKPAMIDKDGRPQ PLEHILQLQEELPQQQLDQKRKT*
Translation from 106 to 1827
> LD22866.pep METEHLKRLEAKEADHIPAILDEFNTKNADLLVFDSFRTDNLWHELWLAI FGILDDQRLSHLHTQCLNTVRILTRDEFSLQTNYIEQEVNTLLKLARIEA GSLKLPATPDELKQEEREEPQLEPSQAQSEVIAEALKCLCNLVYQSSDCR RQCLRQHCLDAILKRVASSMRHPCALEYYDMKLLFLLTALEPAARSRLQI DLNGLTYMTKWLDDKLGEDSVGEEQLNIICELLKVMFNVTSAPDKSPNEY EIQSLHLTGVLRELLLRFGDLATEKDRAVVTHAINLLTNISGSCLTELTL RCSNAELESHKEREQDNEKEKDTEAGAGAKPRECCSQCFEKRNVRSLDVL LRYLRQSLAQQEAEASSHELLSPVLTVLVKCARSDRVMRHYLRQEILPPL RDVSQRPEVGQELRNHLCRFLTLPAMILRDLSAELLFVLCKENVGRMIKY TGYGNAAGLFAKRGILDCRRVEGTDYSSDSEDSDTEEYKQQQQGINPVLG CVEPRSKSHLDDISEEQKEYEAMQLVNLIEQLRQGGIVKPAMIDKDGRPQ PLEHILQLQEELPQQQLDQKRKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19073-PA | 576 | GF19073-PA | 1..576 | 1..573 | 2544 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18307-PA | 573 | GG18307-PA | 1..573 | 1..573 | 2993 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12796-PA | 557 | GH12796-PA | 1..557 | 1..573 | 2147 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ric8a-PB | 573 | CG15797-PB | 1..573 | 1..573 | 2948 | 100 | Plus |
ric8a-PA | 573 | CG15797-PA | 1..573 | 1..573 | 2948 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15241-PA | 559 | GI15241-PA | 1..559 | 1..573 | 2119 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16497-PA | 294 | GL16497-PA | 1..294 | 271..573 | 1148 | 81.6 | Plus |
Dper\GL16496-PA | 240 | GL16496-PA | 1..235 | 1..232 | 814 | 69.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13961-PA | 566 | GA13961-PA | 1..566 | 1..573 | 2372 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22447-PA | 331 | GM22447-PA | 1..331 | 243..573 | 1736 | 99.7 | Plus |
Dsec\GM22436-PA | 202 | GM22436-PA | 1..186 | 1..186 | 964 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16949-PA | 573 | GD16949-PA | 1..573 | 1..573 | 2995 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18843-PA | 560 | GJ18843-PA | 1..560 | 1..573 | 2103 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25114-PA | 566 | GK25114-PA | 1..566 | 1..573 | 2338 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17786-PA | 573 | GE17786-PA | 1..573 | 1..573 | 2966 | 97.9 | Plus |