BDGP Sequence Production Resources |
Search the DGRC for LD22919
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 229 |
Well: | 19 |
Vector: | pOT2 |
Associated Gene/Transcript | csul-RB |
Protein status: | LD22919.pep: gold |
Sequenced Size: | 1927 |
Gene | Date | Evidence |
---|---|---|
csul-RB | 2010-11-11 | Gleaning Pick By Joe Carlson |
1927 bp assembled on 2011-01-03
GenBank Submission: BT125861.1
> LD22919.complete AAAGATGAATTACTACGTCTGTCTGCACCAGGAGGGTGTTAATAGCATAC CCAAGTTAATCGAGAAGGCCTTCGCGAACAACTATAATGTGGTTTCCACC TCTATCAACGCCAATATGTTGCCCTTCGAACCACACGAATCGGATCCCAC ATATCCGGCCACAATTTTGAGCGGCAGCGACTGGAATTCCAAGGTGATAT TTACCATGTCCGACGTGAATGTGGACTCGCCGAATGACAAGCTGCGCGAA CACGCAAAGGAGGTATTCATGAGGGACGTGGCCTGGGCGGAGCACCTGCA AAATGTGGGCAACCTGATGGTACGGCTGCGCGGTCCGGAAAACGAGAATC TGGCCTCCATTGTGCTGGCCAAAACAAAGGGGAACTGGTTCATCCAAGTG CCCATCACCAATCCAGAACTGGCCACATTCGAGCACCGAAAGGATGCCAC CGCCGAGGAGGTGGCTGAAGCGGAATCGAATGACCCGTGGAACTGGTGGA ATAACCTGCGCATGGTCACCAAACACAGCACCAAAGTGAAGGTTGTGATA GAGCTAAACGATGCTGATCGACCCAGCAAGGAAACAGTGCGTCGCTGGTT GGGCGAACCAATCGAGGCAATCATCATTCCGTCTTCCCTGTTCGTCAGAA ACCGCTCCAACTACTGTGTGCTGAAGAAGGAGTGGCAGCTCATCGTCGGG CACTTCATCTCGGTACGGGCCAACATCATCATCTCCACAAATCCCAACGA TAAGGCTTTGTGCCAGTACGCGGATTACGTAAATAAGCTAATTAATGATA ACTGCGATAAGCACATGCTAAACAGCTATGAAAACATGCTGGAAATTCCA CTGCAGCCTCTTTGCGATAATCTGGACACCTATACCTATGAGGTATTCGA AACTGATCCTGTCAAATACAAACTCTATCAGGATGCCGTACAAGCGGCCC TGTTGGATCGAGTAAGCGCTGCGGAGGCTAAAACGAAACTGACAGTTGTA ATGCTACTGGGTGGAGGACGAGGTCCTTTAGCGAGAGCTGTTTTCAATGC TGCCGAGTTAACGAAGCGCAAAGTTCGCCTCTACATCATAGAAAAGAATC CCAATGCCATCCGCACCCTCTCCAACATGGTTAAAACGCTTTGGGCCGAT AAGGATGTTCACATTTTTTCAAAGGACATGCGGGACTTTTCCCCTCCAGA GCTGGCTGACATCATGGTTTCGGAGTTACTTGGTTCCTTTGGCGATAATG AACTTTCGCCCGAGTGCCTTGATGGAGCACTGAAGCTGCTCAAACCGGAT GGAATCAGTATACCCTACAAATCCACCTCCTACATTAATCCACTGATGTC AGCAGTGCTGCACCAAAATGTCTGCCAATTGTTACCAACCTATCCTGCCT TCGACTACGGCTATGTGTCGCTGCTAAAGAATATTTACCATATTGACGAG CCGCAGGCTCTGTTTGAATTCGTACATCCTAATCGAGCGGAAAATATTGA CAATACTCGCTGCAAGACGGTTTCATTTAAAGTCAATAAAGATTGCGTGC TGCACGGAATCGGCGGATACTTTGATACCCATTTGTACAAGGACATCTGC CTAAGCATCAATCCTCTGACCCATACGCCTGGCATGTTCTCCTGGTTCCC CATGTTCTTCGCAACGCGTCCAAGAACTCTGAGGGAGGGACAGACTATAT CCATCCAGTTTTGGCGATGCGTGGATGCAACCAAAGTGTGGTACGAATGG CAGGTGGTCAATTCTCCAGACGATTGGGAGCACCATAACACACGCGGGAC AGGTTACAACATGCGATTGTAACAGCAGACGATGTAATAACAACCAATAG CCAAATAATCGGCATAATTTTTTTGAACTGCAATAAGAATCAAACTAAAG AGACCTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12153494..12154006 | 1154..1666 | 2565 | 100 | Plus |
chr2R | 21145070 | chr2R | 12152534..12152979 | 380..825 | 2230 | 100 | Plus |
chr2R | 21145070 | chr2R | 12152096..12152476 | 1..381 | 1905 | 100 | Plus |
chr2R | 21145070 | chr2R | 12154071..12154312 | 1666..1907 | 1210 | 100 | Plus |
chr2R | 21145070 | chr2R | 12153039..12153206 | 824..991 | 840 | 100 | Plus |
chr2R | 21145070 | chr2R | 12153266..12153429 | 991..1154 | 820 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16266141..16266653 | 1154..1666 | 2565 | 100 | Plus |
2R | 25286936 | 2R | 16265181..16265626 | 380..825 | 2230 | 100 | Plus |
2R | 25286936 | 2R | 16264743..16265123 | 1..381 | 1905 | 100 | Plus |
2R | 25286936 | 2R | 16266718..16266961 | 1666..1909 | 1220 | 100 | Plus |
2R | 25286936 | 2R | 16265686..16265853 | 824..991 | 840 | 100 | Plus |
2R | 25286936 | 2R | 16265913..16266076 | 991..1154 | 820 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16267340..16267852 | 1154..1666 | 2565 | 100 | Plus |
2R | 25260384 | 2R | 16266380..16266825 | 380..825 | 2230 | 100 | Plus |
2R | 25260384 | 2R | 16265942..16266322 | 1..381 | 1905 | 100 | Plus |
2R | 25260384 | 2R | 16267917..16268160 | 1666..1909 | 1220 | 100 | Plus |
2R | 25260384 | 2R | 16266885..16267052 | 824..991 | 840 | 100 | Plus |
2R | 25260384 | 2R | 16267112..16267275 | 991..1154 | 820 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12152096..12152475 | 1..380 | 100 | -> | Plus |
chr2R | 12152535..12152979 | 381..825 | 100 | -> | Plus |
chr2R | 12153041..12153206 | 826..991 | 100 | -> | Plus |
chr2R | 12153267..12153429 | 992..1154 | 100 | -> | Plus |
chr2R | 12153495..12154006 | 1155..1666 | 100 | -> | Plus |
chr2R | 12154072..12154312 | 1667..1907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RB | 1..1818 | 5..1822 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RB | 1..1818 | 5..1822 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RB | 1..1818 | 5..1822 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RB | 69..1975 | 1..1907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RB | 92..1998 | 1..1907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
csul-RB | 92..1998 | 1..1907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16266719..16266959 | 1667..1907 | 100 | Plus | |
2R | 16264743..16265122 | 1..380 | 100 | -> | Plus |
2R | 16265182..16265626 | 381..825 | 100 | -> | Plus |
2R | 16265688..16265853 | 826..991 | 100 | -> | Plus |
2R | 16265914..16266076 | 992..1154 | 100 | -> | Plus |
2R | 16266142..16266653 | 1155..1666 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16266719..16266959 | 1667..1907 | 100 | Plus | |
2R | 16264743..16265122 | 1..380 | 100 | -> | Plus |
2R | 16265182..16265626 | 381..825 | 100 | -> | Plus |
2R | 16265688..16265853 | 826..991 | 100 | -> | Plus |
2R | 16265914..16266076 | 992..1154 | 100 | -> | Plus |
2R | 16266142..16266653 | 1155..1666 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16266719..16266959 | 1667..1907 | 100 | Plus | |
2R | 16264743..16265122 | 1..380 | 100 | -> | Plus |
2R | 16265182..16265626 | 381..825 | 100 | -> | Plus |
2R | 16265688..16265853 | 826..991 | 100 | -> | Plus |
2R | 16265914..16266076 | 992..1154 | 100 | -> | Plus |
2R | 16266142..16266653 | 1155..1666 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12153419..12153581 | 992..1154 | 100 | -> | Plus |
arm_2R | 12152248..12152627 | 1..380 | 100 | -> | Plus |
arm_2R | 12152687..12153131 | 381..825 | 100 | -> | Plus |
arm_2R | 12153193..12153358 | 826..991 | 100 | -> | Plus |
arm_2R | 12153647..12154158 | 1155..1666 | 100 | -> | Plus |
arm_2R | 12154224..12154464 | 1667..1907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16267113..16267275 | 992..1154 | 100 | -> | Plus |
2R | 16265942..16266321 | 1..380 | 100 | -> | Plus |
2R | 16266381..16266825 | 381..825 | 100 | -> | Plus |
2R | 16266887..16267052 | 826..991 | 100 | -> | Plus |
2R | 16267341..16267852 | 1155..1666 | 100 | -> | Plus |
2R | 16267918..16268158 | 1667..1907 | 100 | Plus |
Translation from 0 to 1821
> LD22919.hyp KMNYYVCLHQEGVNSIPKLIEKAFANNYNVVSTSINANMLPFEPHESDPT YPATILSGSDWNSKVIFTMSDVNVDSPNDKLREHAKEVFMRDVAWAEHLQ NVGNLMVRLRGPENENLASIVLAKTKGNWFIQVPITNPELATFEHRKDAT AEEVAEAESNDPWNWWNNLRMVTKHSTKVKVVIELNDADRPSKETVRRWL GEPIEAIIIPSSLFVRNRSNYCVLKKEWQLIVGHFISVRANIIISTNPND KALCQYADYVNKLINDNCDKHMLNSYENMLEIPLQPLCDNLDTYTYEVFE TDPVKYKLYQDAVQAALLDRVSAAEAKTKLTVVMLLGGGRGPLARAVFNA AELTKRKVRLYIIEKNPNAIRTLSNMVKTLWADKDVHIFSKDMRDFSPPE LADIMVSELLGSFGDNELSPECLDGALKLLKPDGISIPYKSTSYINPLMS AVLHQNVCQLLPTYPAFDYGYVSLLKNIYHIDEPQALFEFVHPNRAENID NTRCKTVSFKVNKDCVLHGIGGYFDTHLYKDICLSINPLTHTPGMFSWFP MFFATRPRTLREGQTISIQFWRCVDATKVWYEWQVVNSPDDWEHHNTRGT GYNMRL*
Translation from 1 to 1821
> LD22919.pep KMNYYVCLHQEGVNSIPKLIEKAFANNYNVVSTSINANMLPFEPHESDPT YPATILSGSDWNSKVIFTMSDVNVDSPNDKLREHAKEVFMRDVAWAEHLQ NVGNLMVRLRGPENENLASIVLAKTKGNWFIQVPITNPELATFEHRKDAT AEEVAEAESNDPWNWWNNLRMVTKHSTKVKVVIELNDADRPSKETVRRWL GEPIEAIIIPSSLFVRNRSNYCVLKKEWQLIVGHFISVRANIIISTNPND KALCQYADYVNKLINDNCDKHMLNSYENMLEIPLQPLCDNLDTYTYEVFE TDPVKYKLYQDAVQAALLDRVSAAEAKTKLTVVMLLGGGRGPLARAVFNA AELTKRKVRLYIIEKNPNAIRTLSNMVKTLWADKDVHIFSKDMRDFSPPE LADIMVSELLGSFGDNELSPECLDGALKLLKPDGISIPYKSTSYINPLMS AVLHQNVCQLLPTYPAFDYGYVSLLKNIYHIDEPQALFEFVHPNRAENID NTRCKTVSFKVNKDCVLHGIGGYFDTHLYKDICLSINPLTHTPGMFSWFP MFFATRPRTLREGQTISIQFWRCVDATKVWYEWQVVNSPDDWEHHNTRGT GYNMRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13582-PA | 605 | GF13582-PA | 1..605 | 2..606 | 2789 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20586-PA | 605 | GG20586-PA | 1..605 | 2..606 | 3051 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22107-PA | 604 | GH22107-PA | 1..604 | 2..606 | 2577 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
csul-PB | 605 | CG3730-PB | 1..605 | 2..606 | 3235 | 100 | Plus |
csul-PA | 610 | CG3730-PA | 1..610 | 2..606 | 3219 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19242-PA | 604 | GI19242-PA | 1..604 | 2..606 | 2535 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10719-PA | 604 | GL10719-PA | 1..604 | 2..606 | 2586 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17646-PA | 604 | GA17646-PA | 1..604 | 2..606 | 2603 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21676-PA | 605 | GM21676-PA | 1..605 | 2..606 | 3078 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11176-PA | 605 | GD11176-PA | 1..605 | 2..606 | 3030 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20318-PA | 604 | GJ20318-PA | 1..604 | 2..606 | 2598 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20749-PA | 606 | GK20749-PA | 4..606 | 1..606 | 2589 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11771-PA | 605 | GE11771-PA | 1..605 | 2..606 | 3025 | 93.4 | Plus |