BDGP Sequence Production Resources |
Search the DGRC for LD22957
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 229 |
Well: | 57 |
Vector: | pOT2 |
Associated Gene/Transcript | CycD-RD |
Protein status: | LD22957.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2137 |
Gene | Date | Evidence |
---|---|---|
CG9096 | 2001-11-29 | Blastp of sequenced clone |
CG9096 | 2003-01-01 | Sim4 clustering to Release 3 |
CycD | 2008-04-29 | Release 5.5 accounting |
CycD | 2008-08-15 | Release 5.9 accounting |
CycD | 2008-12-18 | 5.12 accounting |
2137 bp (2137 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069509
> LD22957.complete AAGTGGCAAACGTGTGCAACTTCGAGTATACTTTTTTAATAGTTAATTTA CATTACTCCATGAAGTGCTGTGCCGTTTGTATATAACCAGAATTCCGAGA ATAGGCTGTTCCCATATCGGAGTTACCCAAAGTTCCTGATAAATCGGCAC ACATAAATGGCTTGAGAGTGCGGCGATCCATAGAATCCATAGCTTTAAAC GGAACGTATGGCCGATATAATGGATCTTTTATGCTCGGAAATCATAGTCT ACGAATCAGATCCATCATTGTATCGTTTGAACAAACGACAGCAGCAAATG TCCTCACCGGCGATCATTCGGGATCAATCATCGATATGTTCATCCTTGGG GGACGCGGAATCCGATTCCCATCCGGATGCCCAGAACAATGCCGTAGTGT GCAATATGAAGGAGCTGGTGTATATATACGCGTCCGTGGACTCGGCTGCG AAAAATCCAGAACAATTGGAGCCGCCTCCGCCACCTCCACCACCGCCGCC ACCACCACCGACAGCGACCCAATCAATCCAAAGTTATCCGCGTTACATCA GCCAGGAGCCACCGACGTCACATTGCCAACGACTCGACGAACGCCTGACC ACAACAGCCGATCCACCCGCAACCGACAACGTGAACACTGCCATCGGGGA TCCCACATTGTATTCGGATCGGTGTCTGGAGAATTTCCTCAAGGTCGAGG AGAAGCACCACAAAATTCCCGACACGTACTTTAGCATCCAGAAGGATATT ACGCCACCGATGCGCAAAATTGTCGCCGAATGGATGATGGAAGTGTGTGC CGAGGAAAATTGCCAGGAAGAGGTCGTATTACTGGCATTAAATTACATGG ATCGATTTCTTTCGAGCAAATCAGTACGCAAGACCCAGCTACAAATTTTG GCCGCAGCTTGCCTCTTACTGGCTTCAAAGCTCCGTGAACCCAGCTGTCG TGCTCTTTCGGTGGATCTACTCGTTGTTTACACGGACAACAGCATCTACA AGGATGATTTGATTAAATGGGAGCTGTATGTGCTAAGTCGCTTGGGCTGG GACCTCTCATCTGTGACTCCCTTGGACTTCCTTGAGCTTCTGATGATGCG CCTGCCGATAGGCAGCAAAAACTTTCCGGACATAAACATTGGCAAAGTGC GGGGACATGCTCAGGCATTTATATCGTTGGCAGCAAAAGAACATAAGTTT GCCAAGTTCTCGGCCAGCACCATAGCTGCATCGAGCATAGCTGCGTCAAT GAATGGCCTAAAGTGGCATCTGCGATCGGGACACAATCTACACTTCCTTT TGAGTCTGATGACCGATCTAACCAGCGTGGAGCAAGCTCAGGTGCGAGAT TGTATGCTGCACATGGAGGACATCTTTAAGGAGCACAGTCGGAATCTAGA GCCATTTCTAGTGAATATTGACCCAAAAGAAATGTCAACATTATACTACA AGAGGCGCTTCCAAATACATCAATCGCAGCATCTCTCGCAAATCTCAATT AGACCCTTGCCGCTACCGAAAGCTCCTGCCGAGTGCGTGGAGCAACACCA GCAGCAGCACAACTTTGGGTCCGCAGCGCCACATCGGACGCACACGTGCA AGATGCAGGCGCAGGCTCAGGCTCAAAACGAGATACAAGACGTTACATTT TGAGGTGTCAAATGATAGTTATGCATACATGATAGTTATGTCAGGCTTAA GTTGAAATTATATATAGGATCCAAATAGTCCGATCACTATAGGATTGGCC AATATCACACTATTTACATTTGAATCGATGTATTTTATATGTACGCAACT ATTTTTTACCAAACTATGGGTTATTATTTTTAGCTATCCTAAATATTTTG TATAAAATAGTTTTAAATAATCATCATGAAACTTTGAAATGGATGAAACA TAAAAACGAGACTGATTGTAAGCAGCAAAGCAACATTTTTTTTTTGTATA TAAGCTTTTCGAAATCCTACACAGATAACCAAAAAAGAACGAACTATTAA ATGCAATTTTTTTAAAAACCATCCAACATAAAGAGAAAAACAATATGTTA AAGTTAACTTTGGATAACAATTATATAAGTTGGCAAATAAATGATAGAAA AAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CycD-RD | 2166 | CycD-RD | 54..2160 | 1..2107 | 10535 | 100 | Plus |
CycD-RE | 2229 | CycD-RE | 231..2229 | 107..2105 | 9995 | 100 | Plus |
CycD-RF | 2466 | CycD-RF | 468..2466 | 107..2105 | 9995 | 100 | Plus |
CycD-RE | 2229 | CycD-RE | 14..119 | 1..106 | 530 | 100 | Plus |
CycD-RF | 2466 | CycD-RF | 54..159 | 1..106 | 530 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15796663..15797432 | 2105..1336 | 3850 | 100 | Minus |
chrX | 22417052 | chrX | 15798375..15799063 | 795..107 | 3445 | 100 | Minus |
chrX | 22417052 | chrX | 15797938..15798159 | 1014..793 | 1110 | 100 | Minus |
chrX | 22417052 | chrX | 15797700..15797874 | 1189..1015 | 875 | 100 | Minus |
chrX | 22417052 | chrX | 15797494..15797643 | 1336..1187 | 750 | 100 | Minus |
chrX | 22417052 | chrX | 15799372..15799477 | 106..1 | 530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15906820..15907591 | 2107..1336 | 3860 | 100 | Minus |
X | 23542271 | X | 15908534..15909222 | 795..107 | 3445 | 100 | Minus |
X | 23542271 | X | 15908097..15908318 | 1014..793 | 1110 | 100 | Minus |
X | 23542271 | X | 15907859..15908033 | 1189..1015 | 875 | 100 | Minus |
X | 23542271 | X | 15907653..15907802 | 1336..1187 | 750 | 100 | Minus |
X | 23542271 | X | 15909531..15909636 | 106..1 | 530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15914918..15915689 | 2107..1336 | 3860 | 100 | Minus |
X | 23527363 | X | 15916632..15917320 | 795..107 | 3445 | 100 | Minus |
X | 23527363 | X | 15916195..15916416 | 1014..793 | 1110 | 100 | Minus |
X | 23527363 | X | 15915957..15916131 | 1189..1015 | 875 | 100 | Minus |
X | 23527363 | X | 15915751..15915900 | 1336..1187 | 750 | 100 | Minus |
X | 23527363 | X | 15917629..15917734 | 106..1 | 530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1905..2048 | 1947..2086 | 134 | 59.9 | Plus |
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 871..994 | 460..582 | 122 | 56.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15796663..15797432 | 1336..2105 | 100 | <- | Minus |
chrX | 15797495..15797640 | 1190..1335 | 100 | <- | Minus |
chrX | 15797700..15797874 | 1015..1189 | 100 | <- | Minus |
chrX | 15797938..15798159 | 793..1014 | 100 | <- | Minus |
chrX | 15798378..15799063 | 107..792 | 95 | <- | Minus |
chrX | 15799372..15799477 | 1..106 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycD-RF | 1..1434 | 220..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycD-RF | 1..1434 | 220..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycD-RD | 1..1434 | 220..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycD-RA | 1..1446 | 208..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycD-RD | 1..1434 | 220..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycD-RD | 35..2139 | 1..2105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycD-RD | 35..2139 | 1..2105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycD-RD | 41..2145 | 1..2105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycD-RA | 1..2105 | 1..2105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CycD-RD | 41..2145 | 1..2105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15907654..15907799 | 1190..1335 | 100 | <- | Minus |
X | 15907859..15908033 | 1015..1189 | 100 | <- | Minus |
X | 15906822..15907591 | 1336..2105 | 100 | <- | Minus |
X | 15908097..15908318 | 793..1014 | 100 | <- | Minus |
X | 15908537..15909222 | 107..792 | 100 | <- | Minus |
X | 15909531..15909636 | 1..106 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15907654..15907799 | 1190..1335 | 100 | <- | Minus |
X | 15907859..15908033 | 1015..1189 | 100 | <- | Minus |
X | 15906822..15907591 | 1336..2105 | 100 | <- | Minus |
X | 15908097..15908318 | 793..1014 | 100 | <- | Minus |
X | 15908537..15909222 | 107..792 | 100 | <- | Minus |
X | 15909531..15909636 | 1..106 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15907654..15907799 | 1190..1335 | 100 | <- | Minus |
X | 15907859..15908033 | 1015..1189 | 100 | <- | Minus |
X | 15906822..15907591 | 1336..2105 | 100 | <- | Minus |
X | 15908097..15908318 | 793..1014 | 100 | <- | Minus |
X | 15908537..15909222 | 107..792 | 100 | <- | Minus |
X | 15909531..15909636 | 1..106 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15800855..15801624 | 1336..2105 | 100 | <- | Minus |
arm_X | 15801687..15801832 | 1190..1335 | 100 | <- | Minus |
arm_X | 15801892..15802066 | 1015..1189 | 100 | <- | Minus |
arm_X | 15802130..15802351 | 793..1014 | 100 | <- | Minus |
arm_X | 15802570..15803255 | 107..792 | 100 | <- | Minus |
arm_X | 15803564..15803669 | 1..106 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15914920..15915689 | 1336..2105 | 100 | <- | Minus |
X | 15915752..15915897 | 1190..1335 | 100 | <- | Minus |
X | 15915957..15916131 | 1015..1189 | 100 | <- | Minus |
X | 15916195..15916416 | 793..1014 | 100 | <- | Minus |
X | 15916635..15917320 | 107..792 | 100 | <- | Minus |
X | 15917629..15917734 | 1..106 | 100 | Minus |
Translation from 207 to 1652
> LD22957.pep MADIMDLLCSEIIVYESDPSLYRLNKRQQQMSSPAIIRDQSSICSSLGDA ESDSHPDAQNNAVVCNMKELVYIYASVDSAAKNPEQLEPPPPPPPPPPPP PTATQSIQSYPRYISQEPPTSHCQRLDERLTTTADPPATDNVNTAIGDPT LYSDRCLENFLKVEEKHHKIPDTYFSIQKDITPPMRKIVAEWMMEVCAEE NCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPSCRAL SVDLLVVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLP IGSKNFPDINIGKVRGHAQAFISLAAKEHKFAKFSASTIAASSIAASMNG LKWHLRSGHNLHFLLSLMTDLTSVEQAQVRDCMLHMEDIFKEHSRNLEPF LVNIDPKEMSTLYYKRRFQIHQSQHLSQISIRPLPLPKAPAECVEQHQQQ HNFGSAAPHRTHTCKMQAQAQAQNEIQDVTF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24509-PA | 466 | GF24509-PA | 199..336 | 152..292 | 197 | 34.8 | Plus |
Dana\GF14977-PA | 713 | GF14977-PA | 356..470 | 181..296 | 171 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19360-PA | 475 | GG19360-PA | 1..475 | 5..481 | 2256 | 93.5 | Plus |
Dere\GG13881-PA | 491 | GG13881-PA | 204..341 | 152..292 | 184 | 33.3 | Plus |
Dere\GG24197-PA | 708 | GG24197-PA | 357..556 | 181..355 | 176 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12170-PA | 272 | GH12170-PA | 2..272 | 145..418 | 933 | 75.6 | Plus |
Dgri\GH16723-PA | 484 | GH16723-PA | 206..343 | 152..292 | 210 | 35.5 | Plus |
Dgri\GH13253-PA | 641 | GH13253-PA | 231..384 | 164..321 | 175 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CycD-PF | 477 | CG9096-PF | 1..477 | 5..481 | 2496 | 100 | Plus |
CycD-PE | 477 | CG9096-PE | 1..477 | 5..481 | 2496 | 100 | Plus |
CycD-PD | 477 | CG9096-PD | 1..477 | 5..481 | 2496 | 100 | Plus |
CycA-PC | 490 | CG5940-PC | 202..339 | 152..292 | 187 | 34 | Plus |
CycA-PA | 491 | CG5940-PA | 203..340 | 152..292 | 187 | 34 | Plus |
CycE-PB | 602 | CG3938-PB | 250..449 | 181..355 | 169 | 27.1 | Plus |
CycE-PD | 709 | CG3938-PD | 357..556 | 181..355 | 169 | 27.1 | Plus |
CycE-PE | 709 | CG3938-PE | 357..556 | 181..355 | 169 | 27.1 | Plus |
CycE-PA | 709 | CG3938-PA | 357..556 | 181..355 | 169 | 27.1 | Plus |
CycE-PC | 709 | CG3938-PC | 357..556 | 181..355 | 169 | 27.1 | Plus |
CycE-PF | 712 | CG3938-PF | 360..559 | 181..355 | 169 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14224-PA | 201 | GI14224-PA | 1..198 | 196..394 | 608 | 68.8 | Plus |
Dmoj\GI13452-PA | 525 | GI13452-PA | 233..370 | 152..292 | 207 | 35.5 | Plus |
Dmoj\GI17292-PA | 647 | GI17292-PA | 272..386 | 181..296 | 171 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20678-PA | 467 | GL20678-PA | 1..467 | 5..481 | 1292 | 59.3 | Plus |
Dper\GL15439-PA | 721 | GL15439-PA | 362..476 | 181..296 | 166 | 31.6 | Plus |
Dper\GL20815-PA | 306 | GL20815-PA | 4..116 | 178..292 | 164 | 34.7 | Plus |
Dper\GL18583-PA | 439 | GL18583-PA | 160..304 | 148..293 | 158 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25615-PA | 192 | GA25615-PA | 4..184 | 5..196 | 379 | 46.3 | Plus |
Dpse\GA27869-PA | 159 | GA27869-PA | 1..159 | 324..481 | 359 | 52.2 | Plus |
Dpse\GA25616-PA | 67 | GA25616-PA | 1..56 | 214..269 | 216 | 94.6 | Plus |
Dpse\GA25959-PA | 349 | GA25959-PA | 93..274 | 170..361 | 188 | 29.2 | Plus |
Dpse\GA19247-PA | 508 | GA19247-PA | 223..360 | 152..292 | 187 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22512-PA | 481 | GM22512-PA | 1..481 | 1..481 | 2540 | 97.9 | Plus |
Dsec\GM24703-PA | 490 | GM24703-PA | 202..339 | 152..292 | 189 | 34 | Plus |
Dsec\GM14232-PA | 706 | GM14232-PA | 355..554 | 181..355 | 179 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15773-PA | 481 | GD15773-PA | 1..481 | 1..481 | 2543 | 98.1 | Plus |
Dsim\GD12771-PA | 490 | GD12771-PA | 202..339 | 152..292 | 189 | 34 | Plus |
Dsim\GD21944-PA | 701 | GD21944-PA | 350..549 | 181..355 | 178 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14657-PA | 392 | GJ14657-PA | 1..381 | 5..377 | 949 | 51.4 | Plus |
Dvir\GJ11813-PA | 511 | GJ11813-PA | 223..360 | 152..292 | 198 | 34 | Plus |
Dvir\GJ17903-PA | 624 | GJ17903-PA | 247..459 | 164..353 | 195 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15308-PA | 504 | GK15308-PA | 164..498 | 130..477 | 971 | 63.4 | Plus |
Dwil\GK24275-PA | 590 | GK24275-PA | 243..472 | 181..401 | 197 | 25 | Plus |
Dwil\GK13671-PA | 520 | GK13671-PA | 198..355 | 130..292 | 185 | 31.9 | Plus |
Dwil\GK13804-PA | 418 | GK13804-PA | 147..276 | 161..292 | 181 | 34.8 | Plus |
Dwil\GK22753-PA | 583 | GK22753-PA | 322..503 | 159..350 | 156 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16008-PA | 477 | GE16008-PA | 1..477 | 5..481 | 2202 | 93.3 | Plus |
Dyak\GE20173-PA | 484 | GE20173-PA | 197..334 | 152..292 | 190 | 34 | Plus |
Dyak\GE19392-PA | 713 | GE19392-PA | 362..561 | 181..355 | 182 | 26.6 | Plus |
Translation from 207 to 1652
> LD22957.hyp MADIMDLLCSEIIVYESDPSLYRLNKRQQQMSSPAIIRDQSSICSSLGDA ESDSHPDAQNNAVVCNMKELVYIYASVDSAAKNPEQLEPPPPPPPPPPPP PTATQSIQSYPRYISQEPPTSHCQRLDERLTTTADPPATDNVNTAIGDPT LYSDRCLENFLKVEEKHHKIPDTYFSIQKDITPPMRKIVAEWMMEVCAEE NCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPSCRAL SVDLLVVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLP IGSKNFPDINIGKVRGHAQAFISLAAKEHKFAKFSASTIAASSIAASMNG LKWHLRSGHNLHFLLSLMTDLTSVEQAQVRDCMLHMEDIFKEHSRNLEPF LVNIDPKEMSTLYYKRRFQIHQSQHLSQISIRPLPLPKAPAECVEQHQQQ HNFGSAAPHRTHTCKMQAQAQAQNEIQDVTF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CycD-PF | 477 | CG9096-PF | 1..477 | 5..481 | 2496 | 100 | Plus |
CycD-PE | 477 | CG9096-PE | 1..477 | 5..481 | 2496 | 100 | Plus |
CycD-PD | 477 | CG9096-PD | 1..477 | 5..481 | 2496 | 100 | Plus |
CycA-PC | 490 | CG5940-PC | 202..339 | 152..292 | 187 | 34 | Plus |
CycA-PA | 491 | CG5940-PA | 203..340 | 152..292 | 187 | 34 | Plus |