BDGP Sequence Production Resources |
Search the DGRC for LD22971
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 229 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6276-RA |
Protein status: | LD22971.pep: gold |
Preliminary Size: | 1901 |
Sequenced Size: | 1839 |
Gene | Date | Evidence |
---|---|---|
CG6276 | 2001-01-01 | Release 2 assignment |
CG6276 | 2001-11-09 | Blastp of sequenced clone |
CG6276 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6276 | 2008-04-29 | Release 5.5 accounting |
CG6276 | 2008-08-15 | Release 5.9 accounting |
CG6276 | 2008-12-18 | 5.12 accounting |
1839 bp (1839 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069510
> LD22971.complete TTTGGTTCACAGCACTTAAAAGAACACTTGGGAAAAACAATAAAAATATT TCGCAAAAGTTATGGCGAACGCTGGATAAGTCAGCCAAAAATTGAATCCA TCGGAGCGACTGCCTTGGAGCCACAGCCCACCCATGATGACGACCGACTT CGCGGGCAGCCAGTTCGTGTCCAGCAATCCCAACACCAGCTGTAGTGCAT CCCGCTGGCTAACGGAGGAGGTCTTTAAACTAATCGAAATTGTGCAGCGC GACGAGGCCATCTACAATCCGAGGCACAAATACTACTTTTGCCGCCCGTA CGTGGAGAACTTTTGGCGCGAGGTGGATTTGAAGCTGGAAAAGAATCCGG GCGCCAGTCTGGCCAAGTGGACCAATTTGCGCATCTCGTTCCGACGAGAG TACACCAACTATCTGGAGGAAAAGGTGCCACCCTGCTGGTCCTACTTCGA CCGCATGTTCTTTCTGCATCCGTATCTACGCAAGAAGCACCAGCAGCCCA AATCGCTGGACACACAGGTGCAGGACGCCCTGGCACACCTCTCGAACCTT TCTAGTCGTATGCAGCGTGAGCGTTCAGTGACCATTCCGGGCAGCAGCAG TATTGGTGGCCAGCCCACGCCCTCCGCCCACCAGTCACCACCTGCACAGC AGCTGGACAACTATCTGGACTACTTTGACGAGGCGGAACACAACAACTCC GAGCTGGATGACATCATGGAGGAGGAGCAGCAGCGCAACAGTCGTTACCA CGGCCAGTTGGACGGCAACGACATTAAGTCGGAGTGCGAGGAGCCGGTGG ATGACTACGAACAAGAGGCGCACGAGCCCGAGGAGGATGAACAGGATGAC CAGGACCTACACAAGATGGCGCCTACTTCTAGCTCTTCATCGGCGGAGGC CCAGCGTCGTTATGCCAACCAGCATTCACACGCCAGCCGAATGCTTCCGG GTCGCCTCCAAATGCGCACCTACCATGACGAGATGCGTGGCGCTATTCGT CCGCGTTCCCAGGAACTCCAAGCTCCAACTGCAGCAGTGGCCGGGGTCAA CTACTCCGCACAGCCGACTGCCCATCCAAACATTTCGTTTGTGCGACCTA CTTTCAGCAAGCCCGTGGATTTGGTTAGCACTACAACGCACGCCGGAGGC GGAGGAGGAGGAGGTGTTCCAGGAACTGCTGGCTTATCCGAAGCGGAACT GCCCACACCATCCACTGCGGCCGTGGCCACCCCGATGGCGCCCAGTAGTA GTGTTAGTGCCAGCAGTAGCAGTAGCTACTTGAGTCAACGGCATGGGCAC AACCATATGCATGGAGGACATCCACAGGTGCCGCCGTCAGCGCTTCCTCT GCGTTTGGAAGCCAACAACGCGTCCGGCGGATCCGTGTCCAACGGCGGTG CGGAGCTGTGCGACTGCAAGACCGATCCGGATGCCATGTTTCTGATGAGC CTGCTGCCCGACATCCAAAAGCTGAACGGCCGTGATCGCGGCAAGATAAA GATAGCCTTCCAGAACATCCTGCAGGACTACCTGTATCCGGATTAGCGTT GATCTCTGTGTATACCTTCCGCTTAACGCAAACGGAACCCAGTTCCAGTA TCGATTTTGTTTAATATTCTCTTTTGTATTTTCGTTGGAGAAAAAAAAAG AATCCTTTAAGCTTCGCTGTGCAAGAACAAAGTATCCTTAAAAACGTTTT GAAAACTATCCGGTATGTTTATTAATTGTATAAATATTTATAAATATTTA ATGTGTAACACAAGAATAAATTCATTTGAAATTAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6276-RA | 1926 | CG6276-RA | 143..1926 | 1..1784 | 8920 | 100 | Plus |
CG14866-RA | 1791 | CG14866-RA | 1703..1791 | 1784..1696 | 445 | 100 | Minus |
CG14866.a | 1823 | CG14866.a | 1735..1823 | 1784..1696 | 445 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11142830..11144392 | 221..1783 | 97 | <- | Minus |
chr3R | 11144454..11144673 | 1..220 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6276-RA | 1..1413 | 134..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6276-RA | 1..1413 | 134..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6276-RA | 1..1413 | 134..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6276-RA | 1..1413 | 134..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6276-RA | 1..1413 | 134..1546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6276-RA | 1..1783 | 1..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6276-RA | 1..1783 | 1..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6276-RA | 24..1806 | 1..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6276-RA | 1..1783 | 1..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6276-RA | 24..1806 | 1..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15318203..15319765 | 221..1783 | 100 | <- | Minus |
3R | 15319827..15320046 | 1..220 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15318203..15319765 | 221..1783 | 100 | <- | Minus |
3R | 15319827..15320046 | 1..220 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15318203..15319765 | 221..1783 | 100 | <- | Minus |
3R | 15319827..15320046 | 1..220 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11143925..11145487 | 221..1783 | 100 | <- | Minus |
arm_3R | 11145549..11145768 | 1..220 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15059034..15060596 | 221..1783 | 100 | <- | Minus |
3R | 15060658..15060877 | 1..220 | 100 | Minus |
Translation from 133 to 1545
> LD22971.pep MMTTDFAGSQFVSSNPNTSCSASRWLTEEVFKLIEIVQRDEAIYNPRHKY YFCRPYVENFWREVDLKLEKNPGASLAKWTNLRISFRREYTNYLEEKVPP CWSYFDRMFFLHPYLRKKHQQPKSLDTQVQDALAHLSNLSSRMQRERSVT IPGSSSIGGQPTPSAHQSPPAQQLDNYLDYFDEAEHNNSELDDIMEEEQQ RNSRYHGQLDGNDIKSECEEPVDDYEQEAHEPEEDEQDDQDLHKMAPTSS SSSAEAQRRYANQHSHASRMLPGRLQMRTYHDEMRGAIRPRSQELQAPTA AVAGVNYSAQPTAHPNISFVRPTFSKPVDLVSTTTHAGGGGGGGVPGTAG LSEAELPTPSTAAVATPMAPSSSVSASSSSSYLSQRHGHNHMHGGHPQVP PSALPLRLEANNASGGSVSNGGAELCDCKTDPDAMFLMSLLPDIQKLNGR DRGKIKIAFQNILQDYLYPD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11714-PA | 471 | GF11714-PA | 1..471 | 2..470 | 1755 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20693-PA | 467 | GG20693-PA | 1..467 | 1..470 | 2140 | 94.7 | Plus |
Dere\GG20704-PA | 103 | GG20704-PA | 1..103 | 368..470 | 387 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18744-PA | 489 | GH18744-PA | 1..489 | 2..470 | 1451 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6276-PA | 470 | CG6276-PA | 1..470 | 1..470 | 2497 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24660-PA | 496 | GI24660-PA | 1..496 | 2..470 | 1348 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12066-PA | 463 | GL12066-PA | 1..463 | 2..470 | 1619 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26181-PA | 463 | GA26181-PA | 1..463 | 2..470 | 1613 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25786-PA | 470 | GM25786-PA | 1..470 | 1..470 | 2497 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20363-PA | 470 | GD20363-PA | 1..470 | 1..470 | 2494 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24034-PA | 491 | GJ24034-PA | 1..491 | 2..470 | 1358 | 59.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13487-PA | 473 | GK13487-PA | 1..473 | 2..470 | 1451 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26391-PA | 467 | GE26391-PA | 1..467 | 1..470 | 2111 | 94.3 | Plus |
Translation from 133 to 1545
> LD22971.hyp MMTTDFAGSQFVSSNPNTSCSASRWLTEEVFKLIEIVQRDEAIYNPRHKY YFCRPYVENFWREVDLKLEKNPGASLAKWTNLRISFRREYTNYLEEKVPP CWSYFDRMFFLHPYLRKKHQQPKSLDTQVQDALAHLSNLSSRMQRERSVT IPGSSSIGGQPTPSAHQSPPAQQLDNYLDYFDEAEHNNSELDDIMEEEQQ RNSRYHGQLDGNDIKSECEEPVDDYEQEAHEPEEDEQDDQDLHKMAPTSS SSSAEAQRRYANQHSHASRMLPGRLQMRTYHDEMRGAIRPRSQELQAPTA AVAGVNYSAQPTAHPNISFVRPTFSKPVDLVSTTTHAGGGGGGGVPGTAG LSEAELPTPSTAAVATPMAPSSSVSASSSSSYLSQRHGHNHMHGGHPQVP PSALPLRLEANNASGGSVSNGGAELCDCKTDPDAMFLMSLLPDIQKLNGR DRGKIKIAFQNILQDYLYPD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6276-PA | 470 | CG6276-PA | 1..470 | 1..470 | 2497 | 100 | Plus |