BDGP Sequence Production Resources |
Search the DGRC for LD23009
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 230 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32512-RA |
Protein status: | LD23009.pep: gold |
Preliminary Size: | 3541 |
Sequenced Size: | 2225 |
Gene | Date | Evidence |
---|---|---|
CG1739 | 2001-01-01 | Release 2 assignment |
CG32512 | 2001-09-19 | Blastp of sequenced clone |
CG32512 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32512 | 2008-04-29 | Release 5.5 accounting |
CG32512 | 2008-08-15 | Release 5.9 accounting |
CG32512 | 2008-12-18 | 5.12 accounting |
2225 bp assembled on 2007-03-08
GenBank Submission: AY060370
> LD23009.complete CACACCTCAACGCGCCGCGTGTCGCACTTGGTCCCCCCGGAATCCAAAAA AAAAAAAAATAACCACCCCAAATATTAACCCAACCCCACGTTAGAATCGC AGTCAAAACCCACAAACCGATCCGAAAGCGCGGTGTAGAAAAATCCCAAA ATCCAATATTTAAAATATACAAACGGAAAGTTAAGTAACCCCCATTAAAT TTTTTTGCTGTGCGAAGCGAGACAAAGAAGAGTGCCAAAAAGAATACAGA GCATCTAAAAAGGATTATCAATTCAAAGAGGAGCCACAGAAACCAATGCA AAGATGTGCCACAATTCAGGGATCGTGGAGAAAAACAACGAGCAGCAGAT CGAGCGCTACATGGCCTGTGGGATGCCATCGAAGGCGGTGAAGAGTGTCA AGTACACGCTGAAGAAGCGCGAGAAGAAGGAGCAGCAGCGGAGAGATCTG GAAAAGGATCTGCACAGGGAACAGCAGTTCCTTGAGGAACTCGAGCTAAG CAGTAGCGCCAGCGACTCCTCCTCCTCCTCCTCGTCCTCCTCGGTCACCG GCAGCGATAGCGAGGATAGCGGCGTTACCGAAACCGTTTTGAAATCGTCG CCGTCGGCGGATATGACAACCAGTCCAAAGGTCATCTCACCGGCCCCCAC ACCCAGAAGCGACCTCTTACGATTCTGCCCGCGATTTCGCAAGCTGCAGC AGGAGCAGCAGCAGCAGATGCTCAAGGAGATGGAGTTGCAGGAGGAGGAG CCCTTGGCCACCAGCACGCCCGCCGCCGCCCTGAAGGCTCAACAGCAGCG CAAGCTGAGCTCCATGGAGCCGTCAATGGACGACGCCCTGGCCATCGGCA CCCAGATGACTAGGCAGGTGTCCGAGCGAATCACCTGCCTGGTGGCCAAG CTGCAGGCCAGTCGCCTGTACACAATTCTGACGCGTACGACACAGCCAGC ACACTTGATAGCTGTTTGCATCTTGGCCTTTGTGCTGATGACTGTGGGAC GCGACCTCATCGACCCAACGACAACGGTGGCAACAGCAGAAGCAGCAGCG TCTGCAACAGCAGCATCGACGAGAACAGCAACGGGCGGAGTTATGGCGGC CTTGGTCTTCCTGGGCGCCTTTGCCACCCACTTTGGGTCTCAGATCTGGA TGACATTTGTCTCGGGACTCTCGCTGTATTTCTCTCTGCCCCGCCACGTT TTCGGGCAGTGCCAGCAGATCCTCTTCCCGCGCTACTTCGCCCTGAACGC CATGCTCAGTCTGACGATGCTGGTGGTGTATGCCAAGTATTTCCTCAGCG GATGGACGACATCGGCGGGCATCCAGATGGGATCGCTGGCCCTGGCGGCG GGAATTGAGGTGGTGGTGCGCCTGTACCTGGTGCCACCGATGCTGCAGCT GATGCACGAGAAGTACAGGATCGAGGATGCGATCGGCAGTGGCCAGGAGG TGGGCAGCCTTGTCCAGGGCGACCTCGTCGACTGCCCGCACTATCAGCGC ATCCACAAGGGATTCCGGCGCATTCACATGACCATCGCCATTGGCAATAT GACGGTCATGCTGACCACCTGCCTGCAGCTGTATTTTCTGGCATCGAAAA TACGCCTTAGCTAAGGCAAGCCCGAAGTGAAGAATTTATAGATTTAGGTA TCCACCACATAACAACGCATACACACACACACACATTACTACTACTGTAC GTTCCACGTTCGATAAATGTCTCAAATTCAAATATGGCTTATTGAACACT TGAGTTTTTGAACTGGTCCTCCATCCGGCCCCAAATGCCCTTCCTCCGCC CCACACACGCCCACACCACCCATACGCCCATGCACGAAAATATTTAATTT CTCCCAAGGACGCCTTGTTTGCGACGACCTTTCCAATCTGATTTCCTGTG ATAAACTCAGCCCAAAACTCCCAAAACAAAACACCCACCCGCAAACCACA GCACATTTAGCCTAGAGTTGATAGCCAATAATTTACAAGAAGTTATTAAT TAATAGCCTATTGATAATTAATTATACTGTTTTTTTTTTTTTGTCTCATT CATTAATTTTCTTCTGTTATTTATTAATCCACCGAAAACTATGTTTTTCT CTGTTTTAAGTGCGGATATTAAGTGAATGTAATTTATATTAAAACAAACA AACAAAAACAACAACAAAAGAAACAAAATCAAAAACCAAAAAAGCACAAA AAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32512-RA | 2518 | CG32512-RA | 223..2447 | 1..2225 | 11065 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20927541..20928573 | 2197..1165 | 5165 | 100 | Minus |
chrX | 22417052 | chrX | 20931757..20932679 | 923..1 | 4615 | 100 | Minus |
chrX | 22417052 | chrX | 20928958..20929200 | 1166..924 | 1215 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 21062356..21063416 | 2225..1165 | 5245 | 99.6 | Minus |
X | 23542271 | X | 21066600..21067522 | 923..1 | 4615 | 100 | Minus |
X | 23542271 | X | 21063801..21064043 | 1166..924 | 1215 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 21047448..21048508 | 2225..1165 | 5245 | 99.6 | Minus |
X | 23527363 | X | 21051692..21052614 | 923..1 | 4615 | 100 | Minus |
X | 23527363 | X | 21048893..21049135 | 1166..924 | 1215 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2390 | 1016..1084 | 167 | 73.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1076..1144 | 1022..1090 | 156 | 69.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6857 | 1016..1082 | 155 | 70.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6815 | 1016..1100 | 154 | 65.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6698..6781 | 1000..1084 | 152 | 65.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1093..1162 | 1012..1084 | 151 | 69.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2582..2666 | 990..1075 | 148 | 65.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6828 | 1016..1077 | 148 | 71 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6818 | 1016..1082 | 145 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2752..2832 | 1004..1082 | 139 | 67.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1099..1151 | 1030..1082 | 139 | 73.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6827..6898 | 1016..1084 | 137 | 68.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2360 | 1029..1084 | 136 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2432 | 1016..1081 | 131 | 68.1 | Plus |
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 133..439 | 41..352 | 128 | 56.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2762..2817 | 1027..1082 | 127 | 69.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2369 | 1019..1084 | 125 | 68.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1061..1112 | 1031..1082 | 125 | 71.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1040..1121 | 1016..1100 | 121 | 64 | Plus |
rover | 7318 | rover ROVER 7318bp | 5572..5629 | 2106..2049 | 119 | 67.2 | Minus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 508..567 | 1009..1067 | 117 | 68.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1533..1589 | 1016..1069 | 116 | 70.2 | Plus |
Damb\P-element_T | 3329 | Damb\P-element_T P_T 3329bp Derived from AF012414. | 1839..1948 | 2058..1953 | 115 | 60.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20927598..20928572 | 1166..2140 | 100 | <- | Minus |
chrX | 20928959..20929039 | 1085..1165 | 100 | == | Minus |
chrX | 20929109..20929200 | 924..1015 | 100 | <- | Minus |
chrX | 20931757..20932679 | 1..923 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32512-RA | 1..1311 | 304..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32512-RA | 1..1311 | 304..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32512-RA | 1..1311 | 304..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32512-RA | 1..1311 | 304..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32512-RA | 1..1311 | 304..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32512-RA | 1..2197 | 1..2197 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32512-RA | 12..2208 | 1..2197 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32512-RA | 19..2215 | 1..2197 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32512-RA | 1..2197 | 1..2197 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32512-RA | 19..2215 | 1..2197 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21062384..21063415 | 1166..2197 | 100 | <- | Minus |
X | 21063802..21064043 | 924..1165 | 100 | <- | Minus |
X | 21066600..21067522 | 1..923 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21062384..21063415 | 1166..2197 | 100 | <- | Minus |
X | 21063802..21064043 | 924..1165 | 100 | <- | Minus |
X | 21066600..21067522 | 1..923 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21062384..21063415 | 1166..2197 | 100 | <- | Minus |
X | 21063802..21064043 | 924..1165 | 100 | <- | Minus |
X | 21066600..21067522 | 1..923 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20934829..20935070 | 924..1165 | 100 | <- | Minus |
arm_X | 20933411..20934442 | 1166..2197 | 100 | <- | Minus |
arm_X | 20937627..20938549 | 1..923 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21047476..21048507 | 1166..2197 | 100 | <- | Minus |
X | 21048894..21049135 | 924..1165 | 100 | <- | Minus |
X | 21051692..21052614 | 1..923 | 100 | Minus |
Translation from 303 to 1613
> LD23009.pep MCHNSGIVEKNNEQQIERYMACGMPSKAVKSVKYTLKKREKKEQQRRDLE KDLHREQQFLEELELSSSASDSSSSSSSSSVTGSDSEDSGVTETVLKSSP SADMTTSPKVISPAPTPRSDLLRFCPRFRKLQQEQQQQMLKEMELQEEEP LATSTPAAALKAQQQRKLSSMEPSMDDALAIGTQMTRQVSERITCLVAKL QASRLYTILTRTTQPAHLIAVCILAFVLMTVGRDLIDPTTTVATAEAAAS ATAASTRTATGGVMAALVFLGAFATHFGSQIWMTFVSGLSLYFSLPRHVF GQCQQILFPRYFALNAMLSLTMLVVYAKYFLSGWTTSAGIQMGSLALAAG IEVVVRLYLVPPMLQLMHEKYRIEDAIGSGQEVGSLVQGDLVDCPHYQRI HKGFRRIHMTIAIGNMTVMLTTCLQLYFLASKIRLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21856-PA | 477 | GF21856-PA | 1..477 | 1..436 | 1495 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17557-PA | 441 | GG17557-PA | 1..441 | 1..436 | 1885 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12899-PA | 465 | GH12899-PA | 141..465 | 123..436 | 1137 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32512-PD | 436 | CG32512-PD | 1..436 | 1..436 | 2183 | 100 | Plus |
CG32512-PA | 436 | CG32512-PA | 1..436 | 1..436 | 2183 | 100 | Plus |
CG32512-PC | 233 | CG32512-PC | 4..233 | 207..436 | 1163 | 100 | Plus |
CG32512-PB | 208 | CG32512-PB | 1..208 | 229..436 | 1055 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14453-PA | 466 | GI14453-PA | 1..466 | 1..436 | 1217 | 56.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16582-PA | 154 | GL16582-PA | 1..154 | 283..436 | 789 | 91.6 | Plus |
Dper\GL16581-PA | 226 | GL16581-PA | 1..222 | 1..234 | 378 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22297-PA | 427 | GA22297-PA | 1..427 | 1..436 | 1344 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22641-PA | 310 | GM22641-PA | 10..310 | 141..436 | 1101 | 75.3 | Plus |
Dsec\GM22641-PA | 310 | GM22641-PA | 1..65 | 1..69 | 335 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15508-PA | 202 | GD15508-PA | 1..202 | 1..207 | 847 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18788-PA | 469 | GJ18788-PA | 1..469 | 1..436 | 1203 | 55.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25329-PA | 504 | GK25329-PA | 216..504 | 160..436 | 1134 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15318-PA | 432 | GE15318-PA | 1..432 | 1..436 | 1769 | 89.1 | Plus |
Translation from 303 to 1613
> LD23009.hyp MCHNSGIVEKNNEQQIERYMACGMPSKAVKSVKYTLKKREKKEQQRRDLE KDLHREQQFLEELELSSSASDSSSSSSSSSVTGSDSEDSGVTETVLKSSP SADMTTSPKVISPAPTPRSDLLRFCPRFRKLQQEQQQQMLKEMELQEEEP LATSTPAAALKAQQQRKLSSMEPSMDDALAIGTQMTRQVSERITCLVAKL QASRLYTILTRTTQPAHLIAVCILAFVLMTVGRDLIDPTTTVATAEAAAS ATAASTRTATGGVMAALVFLGAFATHFGSQIWMTFVSGLSLYFSLPRHVF GQCQQILFPRYFALNAMLSLTMLVVYAKYFLSGWTTSAGIQMGSLALAAG IEVVVRLYLVPPMLQLMHEKYRIEDAIGSGQEVGSLVQGDLVDCPHYQRI HKGFRRIHMTIAIGNMTVMLTTCLQLYFLASKIRLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32512-PD | 436 | CG32512-PD | 1..436 | 1..436 | 2183 | 100 | Plus |
CG32512-PA | 436 | CG32512-PA | 1..436 | 1..436 | 2183 | 100 | Plus |
CG32512-PC | 233 | CG32512-PC | 4..233 | 207..436 | 1163 | 100 | Plus |
CG32512-PB | 208 | CG32512-PB | 1..208 | 229..436 | 1055 | 100 | Plus |