BDGP Sequence Production Resources |
Search the DGRC for LD23056
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 230 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | l(2)gd1-RA |
Protein status: | LD23056.pep: gold |
Preliminary Size: | 2875 |
Sequenced Size: | 2982 |
Gene | Date | Evidence |
---|---|---|
CG4713 | 2001-01-01 | Release 2 assignment |
CG4713 | 2001-09-19 | Blastp of sequenced clone |
CG4713 | 2003-01-01 | Sim4 clustering to Release 3 |
l(2)gd1 | 2008-04-29 | Release 5.5 accounting |
l(2)gd1 | 2008-08-15 | Release 5.9 accounting |
l(2)gd1 | 2008-12-18 | 5.12 accounting |
2982 bp (2982 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058523
> LD23056.complete TTGTCTGCGGCTGAACTGTTGCGACGCAAAAATTTAAAGGATTTGAAAGT CTTTATAGACTTATTTTAGTTAATAAACAGCCTCTGTGCAATCAAGGATG TTCTCCAGAAAGAAGCCAGAGCCAGCGAAAAGAAGGCAACACGATTTATC GCAGTTCGGTCTTACGGAAATCCCAGATGATTTTGATCCCAGCGCTGGAT ATGGTGAGGACGATGGGGGTGACAGTGATTTGGAGGCAGAGCTTGCGGCC ATAACCGGCGGAGAAGGAGCCAAGCCAAAGCCCAAGCCCAAAGCAAAGCT GTTACCCGCCAGTGATTTGGACAAAATGATAGCCGACAGCTTGCGTGATG TCAGCGACGATGATGATGATGACAATTTGGAAAGCGATCCGGATCTTCTT GGCGAGCTGAGCGGAATCGGTGGTCTAGAGGAGGCAGAGGAAGAGGAGCC TGTCGCACAACCGCCAGCTGCCTCTGAGGAACCCGTCCAGACCTTTCTGC CCACGACGACTGTGGACACATTAAGCATTATCAAACAGCGCCTGGAAATG TACAAGCAGGCCGAGGCCAATGCCAAGACTGCCGGCGATTCTGGCAAAGC AAGGCGATTTGGAAGAGGCCTTAAGACTCTGAAAGATCTGCACAGGCAGG CAGCGGCTGGCAAGTCCATTAACGTGGATGACATTCCACCTGAAGTCAGT GTAAAGCCAATTGGCGGGCAGGCTCCTCCAGTGCCTGCAGAGGAGTCACC AGCTCCTTCCACACCTGCTTCCCCTCCGCCTGTGCCTAGTCGTGCAGCTC CAGATCCACCAACCCCCGGCACCCCCGTGGAGCCCACTACATCTGTGGCT CCCACATCTCCCCCTAATCCTCTTGTGACGCAAATGCGCAGCCGCCAGAC GGACTACAAAGCTGCTGCACTGCAATCTAAGCGCAGTGGTGACATATCTA CTGCCCTTCAGTTTCTCAAAGTGGTCAAGCAATTTGACGTAGTTATAAAA ATGTGTGAAGACGGACAGGAAGTTGATTTGAGTGACATGCCCCCTCCACC AGCTGAGTTTCTTGAATTCCTTAAAAAAATGCAAGAAGAAGCAGCCGCAG AAGCTGTCGCAGAACCTACTGCTGCCCCAGAACCCACACCTGTTGCTCCT GCTCCTGTTCTAGCAGCTGCAACAAATATGTTGGAGGCTCTGCAGCAACG TTTAGAGAAATATCAATCTGTAGAAGCGGCAGCCAAGGCAGAAAACAATA GCGGAAAAGCAAGACGCTTTGGAAGGATTGTGAAGCAATACGAAGATGCC ATAAAGTTGTACAAGGCAGGCAAACCAGTGCCTTACGATGAGCTGCCTGT GCCACCAGGTTTTGGACCGCTGCCTACGGCTGATGCTGCTCCTGTCGCGC CGACACCGTCGCTGCCCACTTCGCCTACATCTCCACCGCCAACAGCAAGT ACTTCCGCAGGAGGAACACCCTCCAGTTCCAGTGCGACGACACCTACAGC TCCTCGAAAAGCACCTTCACCTCCTAAGCCCAAAGAGTTAACAACACGCA CGTCTGGCAATCAGCAGAAGAATAATATTGCCGAGCAACAAATGAAACTG CTCCTCGAGCGCCAAAAGGAGTTTAAGCTAGCTGCTATAGAGGCCAAAAA AGCGGGAGAAATAGATCAGGCGAAGGAGTACCTCAAGATCTTCAAGGGAT TCGATTCCCTTCTTAATGCAGCGAGTAGTGGATTGCCAGTGGACCTCAGC ACTCTTCCCGTCCCGCCTTCACAAAGGGATAATCTAGAAGCCTCCTTTGC CATTGTATCTGCTGAGGAATGCGATCCGACAGATGATATCTGTGAAATTG GTGTTCGCATGGAGGAGCAGCTGGCAAAACAACTGATGATGTGCAAAAAT ACGCGAGATCATCACAAAGCTATGGGAGATGTAGCAGGCATGAATCGGTT TGAAAATTTAGCCTTAACTGTGCAAAAGGATTTGGATTTGGTGCGATACT CGAAACGAAAGAATGAACCACTGCCAAAGTTTCACTATGAAAAGCGTAGC TTCAACATTGTGCATTGCAACACAGATCTCACAGACAGTGAGCTTGAAAT TGTTGTGGTCCGGGGAATCAGCTACAATGTGGCCAATCCCAAGGACGTGG ATACTTATGTGCGCGTAGAGTTTCCCCTGCTCAATGATGAATCTTTCAAG ACTAAAACCAATGTTATCAGAGACACCAGCAGTCCTGACTACGATGAACG CTTCAAGGTTGACATCCAGCGGACCAATCGTCAGTTCCAGAGAATCTTTA AGCGGCATGGCGTCAAGTTTGAAATATACTCTAGAGGAGGTTTTCTGCGA TCGGATACGTTGATCGGAACCGTAAATGTCAAGCTGCAGCCATTGGAGAC CAAGTGCGAGATACACGACACATATGATCTAATGGATGGTCGCAAGCAAG TAGGTGGAAAATTGGAAGTCAAGATACGCGTTCGCAATCCTATTCTCACC AAGCAAATGGAGCACATCACCGAAAAGTGGTTGGTCTTGGATGCCTAGGG CTAAACAAGAAAATTTAAATAAAATAGGAACGCGTCCCCTTGCGATTGTT CTCGATTAAGTCACTAAGTTATTTGTTTGTAAATATCCCTCACAGAAAAT TCAATTTATCTAAGTATGTACGCTTTTGCCGATTCCTTCGCAGGAAGAAG GCATTTATATATTACGAACACAACACATATAATGTACTATAAATATCTTT ATATATAAATAATATATGTATATATGATATTGCCGGCGTTAAGGCGAAGG CGCAAGTCCAGAAGATTGTGCCGGTGAAGTCAGTCCATTCCAAGAGAGAC AGATTGAGAGTAGGATCGGTCCACTAGCGCCTAGCCGAAACCTGATTATG TTAGCTTTCACATTGCATAAATATTTTCTTTTGATTTATAAACTGTTTGT TGAACTACAACTCCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(2)gd1-RA | 3161 | l(2)gd1-RA | 166..3130 | 1..2965 | 14825 | 100 | Plus |
l(2)gd1.a | 3107 | l(2)gd1.a | 58..2394 | 1..2337 | 11685 | 100 | Plus |
l(2)gd1.a | 3107 | l(2)gd1.a | 2448..3076 | 2337..2965 | 3145 | 100 | Plus |
CG6201.a | 2264 | CG6201.a | 1969..2264 | 2965..2670 | 1480 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 11105961..11107561 | 153..1753 | 8005 | 100 | Plus |
chr2L | 23010047 | chr2L | 11109070..11109605 | 2429..2964 | 2680 | 100 | Plus |
chr2L | 23010047 | chr2L | 11107620..11108052 | 1754..2186 | 2165 | 100 | Plus |
chr2L | 23010047 | chr2L | 11105722..11105875 | 1..154 | 770 | 100 | Plus |
chr2L | 23010047 | chr2L | 11108110..11108261 | 2186..2337 | 760 | 100 | Plus |
chr2L | 23010047 | chr2L | 11108912..11109007 | 2337..2432 | 465 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11107207..11108807 | 153..1753 | 8005 | 100 | Plus |
2L | 23513712 | 2L | 11110316..11110852 | 2429..2965 | 2685 | 100 | Plus |
2L | 23513712 | 2L | 11108866..11109298 | 1754..2186 | 2165 | 100 | Plus |
2L | 23513712 | 2L | 11106968..11107121 | 1..154 | 770 | 100 | Plus |
2L | 23513712 | 2L | 11109356..11109507 | 2186..2337 | 760 | 100 | Plus |
2L | 23513712 | 2L | 11110158..11110253 | 2337..2432 | 465 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11107207..11108807 | 153..1753 | 8005 | 100 | Plus |
2L | 23513712 | 2L | 11110316..11110852 | 2429..2965 | 2685 | 100 | Plus |
2L | 23513712 | 2L | 11108866..11109298 | 1754..2186 | 2165 | 100 | Plus |
2L | 23513712 | 2L | 11106968..11107121 | 1..154 | 770 | 100 | Plus |
2L | 23513712 | 2L | 11109356..11109507 | 2186..2337 | 760 | 100 | Plus |
2L | 23513712 | 2L | 11110158..11110253 | 2337..2432 | 465 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 6335..6381 | 1216..1170 | 118 | 72.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11108913..11109003 | 2338..2428 | 100 | -> | Plus |
chr2L | 11109070..11109363 | 2429..2722 | 100 | == | Plus |
chr2L | 11109422..11109605 | 2781..2964 | 100 | Plus | |
chr2L | 11105722..11105875 | 1..154 | 100 | -> | Plus |
chr2L | 11105963..11107561 | 155..1753 | 100 | -> | Plus |
chr2L | 11107620..11108051 | 1754..2185 | 100 | -> | Plus |
chr2L | 11108110..11108261 | 2186..2337 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)gd1-RA | 1..2451 | 98..2548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)gd1-RA | 1..2451 | 98..2548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)gd1-RA | 1..2451 | 98..2548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)gd1-RA | 1..2451 | 98..2548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)gd1-RA | 1..2451 | 98..2548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)gd1-RA | 17..2980 | 1..2964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)gd1-RA | 17..2980 | 1..2964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)gd1-RA | 26..2989 | 1..2964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)gd1-RA | 17..2980 | 1..2964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)gd1-RA | 26..2989 | 1..2964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11106968..11107121 | 1..154 | 100 | -> | Plus |
2L | 11107209..11108807 | 155..1753 | 100 | -> | Plus |
2L | 11108866..11109297 | 1754..2185 | 100 | -> | Plus |
2L | 11109356..11109507 | 2186..2337 | 100 | -> | Plus |
2L | 11110159..11110249 | 2338..2428 | 100 | -> | Plus |
2L | 11110316..11110851 | 2429..2964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11106968..11107121 | 1..154 | 100 | -> | Plus |
2L | 11107209..11108807 | 155..1753 | 100 | -> | Plus |
2L | 11108866..11109297 | 1754..2185 | 100 | -> | Plus |
2L | 11109356..11109507 | 2186..2337 | 100 | -> | Plus |
2L | 11110159..11110249 | 2338..2428 | 100 | -> | Plus |
2L | 11110316..11110851 | 2429..2964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11106968..11107121 | 1..154 | 100 | -> | Plus |
2L | 11107209..11108807 | 155..1753 | 100 | -> | Plus |
2L | 11108866..11109297 | 1754..2185 | 100 | -> | Plus |
2L | 11109356..11109507 | 2186..2337 | 100 | -> | Plus |
2L | 11110159..11110249 | 2338..2428 | 100 | -> | Plus |
2L | 11110316..11110851 | 2429..2964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11106968..11107121 | 1..154 | 100 | -> | Plus |
arm_2L | 11107209..11108807 | 155..1753 | 100 | -> | Plus |
arm_2L | 11108866..11109297 | 1754..2185 | 100 | -> | Plus |
arm_2L | 11109356..11109507 | 2186..2337 | 100 | -> | Plus |
arm_2L | 11110159..11110249 | 2338..2428 | 100 | -> | Plus |
arm_2L | 11110316..11110851 | 2429..2964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11106968..11107121 | 1..154 | 100 | -> | Plus |
2L | 11107209..11108807 | 155..1753 | 100 | -> | Plus |
2L | 11108866..11109297 | 1754..2185 | 100 | -> | Plus |
2L | 11109356..11109507 | 2186..2337 | 100 | -> | Plus |
2L | 11110159..11110249 | 2338..2428 | 100 | -> | Plus |
2L | 11110316..11110851 | 2429..2964 | 100 | Plus |
Translation from 97 to 2547
> LD23056.pep MFSRKKPEPAKRRQHDLSQFGLTEIPDDFDPSAGYGEDDGGDSDLEAELA AITGGEGAKPKPKPKAKLLPASDLDKMIADSLRDVSDDDDDDNLESDPDL LGELSGIGGLEEAEEEEPVAQPPAASEEPVQTFLPTTTVDTLSIIKQRLE MYKQAEANAKTAGDSGKARRFGRGLKTLKDLHRQAAAGKSINVDDIPPEV SVKPIGGQAPPVPAEESPAPSTPASPPPVPSRAAPDPPTPGTPVEPTTSV APTSPPNPLVTQMRSRQTDYKAAALQSKRSGDISTALQFLKVVKQFDVVI KMCEDGQEVDLSDMPPPPAEFLEFLKKMQEEAAAEAVAEPTAAPEPTPVA PAPVLAAATNMLEALQQRLEKYQSVEAAAKAENNSGKARRFGRIVKQYED AIKLYKAGKPVPYDELPVPPGFGPLPTADAAPVAPTPSLPTSPTSPPPTA STSAGGTPSSSSATTPTAPRKAPSPPKPKELTTRTSGNQQKNNIAEQQMK LLLERQKEFKLAAIEAKKAGEIDQAKEYLKIFKGFDSLLNAASSGLPVDL STLPVPPSQRDNLEASFAIVSAEECDPTDDICEIGVRMEEQLAKQLMMCK NTRDHHKAMGDVAGMNRFENLALTVQKDLDLVRYSKRKNEPLPKFHYEKR SFNIVHCNTDLTDSELEIVVVRGISYNVANPKDVDTYVRVEFPLLNDESF KTKTNVIRDTSSPDYDERFKVDIQRTNRQFQRIFKRHGVKFEIYSRGGFL RSDTLIGTVNVKLQPLETKCEIHDTYDLMDGRKQVGGKLEVKIRVRNPIL TKQMEHITEKWLVLDA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15641-PA | 816 | GF15641-PA | 1..814 | 1..816 | 3076 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23706-PA | 816 | GG23706-PA | 1..816 | 1..816 | 3557 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10307-PA | 828 | GH10307-PA | 1..828 | 1..816 | 2988 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(2)gd1-PA | 816 | CG4713-PA | 1..816 | 1..816 | 4203 | 100 | Plus |
l(2)gd1-PB | 834 | CG4713-PB | 1..834 | 1..816 | 4174 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17069-PA | 838 | GI17069-PA | 1..836 | 1..816 | 2951 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19542-PA | 793 | GL19542-PA | 1..791 | 1..816 | 3064 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18377-PA | 814 | GA18377-PA | 1..812 | 1..816 | 3199 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18896-PA | 816 | GM18896-PA | 1..816 | 1..816 | 4172 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23762-PA | 836 | GD23762-PA | 1..836 | 1..816 | 4152 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10553-PA | 821 | GJ10553-PA | 1..819 | 1..816 | 3110 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18364-PA | 817 | GK18364-PA | 1..815 | 1..816 | 3105 | 77.9 | Plus |
Dwil\GK20266-PA | 387 | GK20266-PA | 1..385 | 1..383 | 1202 | 69.3 | Plus |
Dwil\GK20266-PA | 387 | GK20266-PA | 125..318 | 332..559 | 250 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18513-PA | 816 | GE18513-PA | 1..816 | 1..816 | 3430 | 95.1 | Plus |
Translation from 97 to 2547
> LD23056.hyp MFSRKKPEPAKRRQHDLSQFGLTEIPDDFDPSAGYGEDDGGDSDLEAELA AITGGEGAKPKPKPKAKLLPASDLDKMIADSLRDVSDDDDDDNLESDPDL LGELSGIGGLEEAEEEEPVAQPPAASEEPVQTFLPTTTVDTLSIIKQRLE MYKQAEANAKTAGDSGKARRFGRGLKTLKDLHRQAAAGKSINVDDIPPEV SVKPIGGQAPPVPAEESPAPSTPASPPPVPSRAAPDPPTPGTPVEPTTSV APTSPPNPLVTQMRSRQTDYKAAALQSKRSGDISTALQFLKVVKQFDVVI KMCEDGQEVDLSDMPPPPAEFLEFLKKMQEEAAAEAVAEPTAAPEPTPVA PAPVLAAATNMLEALQQRLEKYQSVEAAAKAENNSGKARRFGRIVKQYED AIKLYKAGKPVPYDELPVPPGFGPLPTADAAPVAPTPSLPTSPTSPPPTA STSAGGTPSSSSATTPTAPRKAPSPPKPKELTTRTSGNQQKNNIAEQQMK LLLERQKEFKLAAIEAKKAGEIDQAKEYLKIFKGFDSLLNAASSGLPVDL STLPVPPSQRDNLEASFAIVSAEECDPTDDICEIGVRMEEQLAKQLMMCK NTRDHHKAMGDVAGMNRFENLALTVQKDLDLVRYSKRKNEPLPKFHYEKR SFNIVHCNTDLTDSELEIVVVRGISYNVANPKDVDTYVRVEFPLLNDESF KTKTNVIRDTSSPDYDERFKVDIQRTNRQFQRIFKRHGVKFEIYSRGGFL RSDTLIGTVNVKLQPLETKCEIHDTYDLMDGRKQVGGKLEVKIRVRNPIL TKQMEHITEKWLVLDA*