Clone LD23187 Report

Search the DGRC for LD23187

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:231
Well:87
Vector:pOT2
Associated Gene/TranscriptCG6686-RA
Protein status:LD23187.pep: gold
Preliminary Size:3064
Sequenced Size:3170

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6686 2001-09-19 Blastp of sequenced clone
CG6686 2003-01-01 Sim4 clustering to Release 3
CG6686 2008-04-29 Release 5.5 accounting
CG6686 2008-08-15 Release 5.9 accounting
CG6686 2008-12-18 5.12 accounting

Clone Sequence Records

LD23187.complete Sequence

3170 bp (3170 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058525

> LD23187.complete
CGGCGTCTTTTTCTTGTGAAATTTTCTGTATTTTGTTGTGAAAATAATAA
TAAATATGGGTTCCTCGTCGTCGGGAAAGAAACACAAGAAGGACAAGAAG
AACCGTCATCGCTCGCGATCGTCGGAGCGACCGCGGCGCGTCACAGAGGA
CGAGGATGTCACACTGGATCTCACCGACGACTCCTCGTCGCGGCACAGAC
ACCACAAGCACAAGAAGCACAAGGAGCACCGCCACAAGCACCACAAGCAA
AAGGAGCGCGAGCGCGCGAACGAGGTCATCTCCCTAGAGGAATCGGACTC
GGATAGTTTCTCCTTTTTTTCAGGTTCCGACTGCGTGGAGGTGCCGGTAC
AGGCGCAGGTGCAGGCGCAGGCCAAGTTGAGGGACGCCAGAGAATCGTCC
AATCGTGACAAGGAGCGGGATTCTGGACGCGATCGTGAACTCCTAAGAGA
AAGGGAGCGAGAACGAGATCGTGAGCGGGAGAGGGATCGGGATCGGGAAA
AGGAGCGCGAACGGGAGCGTGAGAAGGAGCGTCTCAGGGAGCGGGAGGAG
CGCGAGAGAGAGCGTGAGAAGGAACGTATCAGAGAACGCGAGAAAGAACG
CCTTAGGGAGCGCGAGAGGGAGCGGGAACGCGAACGTGTACGGGAGCTCA
CAGCTCCTCCACCACCCCAAATCTCCAAGCATGCCGAATATGAGTCTAGG
CGAGAGCGTGAGATCGAACGGGAACGGGACGCCCGCAAGCGATCTGGCAG
AGAACGTGAAAGGGAACGTAATAGGGAACGGTCCCGATCCCAGTCGCCAG
CATCGTCGTCGCGTAAACCAGCCACTAAGGAACGCGAACCATCGTCTCGT
TCCTTCTCGCCAATACCAGAAAACGGAGCCGGCGATGTCCTGTCCATTAC
GGAGACGAACAAACTTCGCGCCAAGCTGGGTCTGAAGCCACTCGAAGTTG
ATAGTGGTCCCAGCAAGGCAGGCCCTCCGCCTGGAAGCAGTAGTCAAGGC
GAGATCAAAAAACCCCATGGCGAGGCCGATCTCTCCTCGTACAAGGATGA
GTGGGGCGAGTTCTTGCACAAGCCGGCCGACAATCTAAAGGAGAAAAGGG
AGGCAGAGAAGCTGCGCGAGAAACTCAAACAGCGCAAGGAGAAACGATTC
TTAGAGGAGCGCCTGGCTCGCATCAAAACACTGGGAGAGTCTGATGAGGA
AACTGACAATGTGTCCAAGTGGGTGGACAAGAACAAGCGGGTTGTCAACG
AACGCGAGGAGGCGATGCGTAAGGCCAAAGAGTTGGAGGAACTGGATGAG
GCCTTTGGTGTTTCGGAGATTCTCGAGCAAGAGAAAACCAAAGCTCGTCA
GCGAGCATATGGCGATAGCAATCTAAAGGGCCTGCGTGTGGATCATGATA
TGGATGATTTCGGCGAAGGACGCACTGTTATTCTAACTCTTAAGGATCAA
GATGTGCTTAACGAGGAGGAAGGCGACACTCTAGTCAATGTTAACATGGT
CGACGAAGAGCGCTATAAGAAGAATGTGGCCAACAAGAAGCAGAATCCGC
TCAGTTATGGTTATAACGTATACGAGGAGCAGTACGATGAATTGGGCAAT
CCCATCGAACGTTCAGTGCTGGAGAAGTACGATGATGAAATGGAAGGTCA
GCCGAAAAAGCGCAAGAACTTTGTGATTGGTGAGAATATGGATGAGGAGC
GGGAGCACAGACGCAAGCTCCTGGAGATTAAGACCAAATTAGCCGGCAAG
CGTTTGGAAACCTTGGAGGACACCAATCTGCAGCTAGCATCGGACACTTA
CAGTGCAGAAGAGTTGGCCAAATTTAAAAAGCCAAAGAAAAAGGTTAAGA
AACTTCGGCAGAAACTTAAAGCCGAGGATCTTGCGCCTTTGGCGATGGGC
GAAGCATCAGGTTCTTCAGACTTTGGTAGTCGAGGTGGACGTTATCGTGA
TCACGAAGATGCGGAAATGGAAGAGTTTAAACCCCAAATAAAAGTGGAAG
TAGAGGATGATGATTTGGAACGTGTACTTGCCAAGGCTCGCAAACTAAAA
CAAAAGGAGAATATCATCAAGAAGCCTTTGCCCGTCGACTTCGAAAGTAT
ACAGCGGGAGATAAAACCCGAACATGTGGAGGACACCGCATCAGGTGTGG
TCCTTACCGGCGTCGATGGCAACATTGTCTTGAACGCCACAGCTGAGTTT
TGCCGCACTCTGGGTGACATTCCCACGTACGGTATGGCGGGCAACCGTAA
TGAGGACTCCAATGACATGATGGACTTTGACAAGACCGAACAGCCGGAGG
AGCATATGGAAACACATACCGATGAGCCTGCCCTGAGTCACGGCACCTGG
AATTCGGTCAATCCCGATGAAGTCATGCAGCCCGCCGATTTGGATAATCT
GGGTGAAGACCTGGAAGATCGTGCCATTCTAGACGAGGAGCCCGATGTGG
GAGCTGGTGTAGCGAATGCTCTGCGATTGGCGCTGTCCAAGGGTTACCTT
GAAAAGGAGGAAAAGAACAGACCTAGCAACACAAAAATGGCCCATCTGCA
GGCCAAGAACTATTCCATTGAGGATAAAGCGGCTGGTGAGGACGAGAAGG
TTGGCCGTCGCGATCGCTTCCACTTTGGACCGATTACAGACTTTAAGGAC
AAGGAGACCTTCAAGCCCAATGTCAAGTTGGATTATATCGATGACAATGG
CCGCATATTGAACCTCAAAGAGGCTTTCCGCTACTTGTCACATAAGTTCC
ATGGCAAGGGGCCCGGCAAGAATAAGATTGAGAAGCGTCTCAAGAAAATG
GAGCAGGATGGGCTAATGAAAACCATGAGTTCGACAGACACACCCTTGGG
CACACTGACCATGTTGCAGCAGAAGCAAAAGGAGACGAAGACCGCTTACG
TGGTGCTCAGTGGCAACAACAAAAATGTACCAGGTGTCAGTGGCTCCGCA
ATAGCCAAATTTAAGTAGAGAAGGGCGCAGGAAAGACTAGCAATTTAATT
AACAAGATATACACAACCAAATGCAATAGACACTTCCTAATCCGCGTACT
AAATACTTAAGTTTAATACCACAACATATGCATCCGGCTCAAATATGTAA
TTTTCTTCATATTTATTCAAATACACTTTGGATTTATCTTAAAAAGCTAA
AAAAAAAAAAAAAAAAAAAA

LD23187.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:20:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG6686.a 3183 CG6686.a 36..3183 1..3148 15740 100 Plus
CG6686-RB 3342 CG6686-RB 516..3342 324..3150 14135 100 Plus
CG6686-RC 3363 CG6686-RC 539..3363 324..3148 14125 100 Plus
CG6686-RB 3342 CG6686-RB 211..518 1..308 1540 100 Plus
CG6686-RC 3363 CG6686-RC 211..517 1..307 1535 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:43:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 11985090..11986047 1274..317 4775 99.9 Minus
chr2L 23010047 chr2L 11983660..11984428 2586..1818 3785 99.5 Minus
chr2L 23010047 chr2L 11984486..11985035 1821..1272 2735 99.8 Minus
chr2L 23010047 chr2L 11982980..11983316 3148..2812 1685 100 Minus
chr2L 23010047 chr2L 11986347..11986653 307..1 1535 100 Minus
chr2L 23010047 chr2L 11983378..11983602 2812..2588 1125 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:12:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11986437..11987394 1274..317 4775 99.9 Minus
2L 23513712 2L 11985007..11985775 2586..1818 3830 99.9 Minus
2L 23513712 2L 11985833..11986382 1821..1272 2750 100 Minus
2L 23513712 2L 11984325..11984663 3150..2812 1695 100 Minus
2L 23513712 2L 11987694..11988000 307..1 1535 100 Minus
2L 23513712 2L 11984725..11984951 2812..2586 1135 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:43:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11986437..11987394 1274..317 4775 99.8 Minus
2L 23513712 2L 11985007..11985775 2586..1818 3830 99.8 Minus
2L 23513712 2L 11985833..11986382 1821..1272 2750 100 Minus
2L 23513712 2L 11984325..11984663 3150..2812 1695 100 Minus
2L 23513712 2L 11987694..11988000 307..1 1535 100 Minus
2L 23513712 2L 11984725..11984951 2812..2586 1135 100 Minus
Blast to na_te.dros performed 2019-03-16 00:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy10 6006 gypsy10 GYPSY10 6006bp 4300..4446 2929..3094 120 59 Plus

LD23187.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:44:22 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 11982980..11983315 2813..3148 100 <- Minus
chr2L 11983378..11983603 2587..2812 99 <- Minus
chr2L 11983660..11984424 1822..2586 99 <- Minus
chr2L 11984486..11985033 1274..1821 99 <- Minus
chr2L 11985091..11986040 324..1273 100 <- Minus
chr2L 11986148..11986165 306..323 100 <- Minus
chr2L 11986349..11986653 1..305 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:59:49 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
CG6686-RA 1..2913 56..2968 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:03:49 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
CG6686-RA 1..2913 56..2968 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:58:04 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
CG6686-RA 1..2913 56..2968 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:34:25 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
CG6686-RA 1..2913 56..2968 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:12:30 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
CG6686-RA 1..2913 56..2968 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:52:36 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
CG6686-RA 36..3183 1..3148 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:03:49 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
CG6686-RA 36..3183 1..3148 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:58:04 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
CG6686-RA 40..3187 1..3148 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:34:26 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
CG6686-RA 36..3183 1..3148 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:12:30 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
CG6686-RA 40..3187 1..3148 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:44:22 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11984327..11984662 2813..3148 100 <- Minus
2L 11984725..11984950 2587..2812 100 <- Minus
2L 11985007..11985771 1822..2586 100 <- Minus
2L 11985833..11986380 1274..1821 100 <- Minus
2L 11986438..11987387 324..1273 100 <- Minus
2L 11987495..11987512 306..323 100 <- Minus
2L 11987696..11988000 1..305 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:44:22 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11984327..11984662 2813..3148 100 <- Minus
2L 11984725..11984950 2587..2812 100 <- Minus
2L 11985007..11985771 1822..2586 100 <- Minus
2L 11985833..11986380 1274..1821 100 <- Minus
2L 11986438..11987387 324..1273 100 <- Minus
2L 11987495..11987512 306..323 100 <- Minus
2L 11987696..11988000 1..305 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:44:22 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11984327..11984662 2813..3148 100 <- Minus
2L 11984725..11984950 2587..2812 100 <- Minus
2L 11985007..11985771 1822..2586 100 <- Minus
2L 11985833..11986380 1274..1821 100 <- Minus
2L 11986438..11987387 324..1273 100 <- Minus
2L 11987495..11987512 306..323 100 <- Minus
2L 11987696..11988000 1..305 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:58:04 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11984327..11984662 2813..3148 100 <- Minus
arm_2L 11984725..11984950 2587..2812 100 <- Minus
arm_2L 11985007..11985771 1822..2586 100 <- Minus
arm_2L 11985833..11986380 1274..1821 100 <- Minus
arm_2L 11986438..11987387 324..1273 100 <- Minus
arm_2L 11987495..11987512 306..323 100 <- Minus
arm_2L 11987696..11988000 1..305 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:11:19 Download gff for LD23187.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11984327..11984662 2813..3148 100 <- Minus
2L 11984725..11984950 2587..2812 100 <- Minus
2L 11985007..11985771 1822..2586 100 <- Minus
2L 11985833..11986380 1274..1821 100 <- Minus
2L 11986438..11987387 324..1273 100 <- Minus
2L 11987495..11987512 306..323 100 <- Minus
2L 11987696..11988000 1..305 100   Minus

LD23187.pep Sequence

Translation from 55 to 2967

> LD23187.pep
MGSSSSGKKHKKDKKNRHRSRSSERPRRVTEDEDVTLDLTDDSSSRHRHH
KHKKHKEHRHKHHKQKERERANEVISLEESDSDSFSFFSGSDCVEVPVQA
QVQAQAKLRDARESSNRDKERDSGRDRELLRERERERDRERERDRDREKE
REREREKERLREREEREREREKERIREREKERLRERERERERERVRELTA
PPPPQISKHAEYESRREREIERERDARKRSGRERERERNRERSRSQSPAS
SSRKPATKEREPSSRSFSPIPENGAGDVLSITETNKLRAKLGLKPLEVDS
GPSKAGPPPGSSSQGEIKKPHGEADLSSYKDEWGEFLHKPADNLKEKREA
EKLREKLKQRKEKRFLEERLARIKTLGESDEETDNVSKWVDKNKRVVNER
EEAMRKAKELEELDEAFGVSEILEQEKTKARQRAYGDSNLKGLRVDHDMD
DFGEGRTVILTLKDQDVLNEEEGDTLVNVNMVDEERYKKNVANKKQNPLS
YGYNVYEEQYDELGNPIERSVLEKYDDEMEGQPKKRKNFVIGENMDEERE
HRRKLLEIKTKLAGKRLETLEDTNLQLASDTYSAEELAKFKKPKKKVKKL
RQKLKAEDLAPLAMGEASGSSDFGSRGGRYRDHEDAEMEEFKPQIKVEVE
DDDLERVLAKARKLKQKENIIKKPLPVDFESIQREIKPEHVEDTASGVVL
TGVDGNIVLNATAEFCRTLGDIPTYGMAGNRNEDSNDMMDFDKTEQPEEH
METHTDEPALSHGTWNSVNPDEVMQPADLDNLGEDLEDRAILDEEPDVGA
GVANALRLALSKGYLEKEEKNRPSNTKMAHLQAKNYSIEDKAAGEDEKVG
RRDRFHFGPITDFKDKETFKPNVKLDYIDDNGRILNLKEAFRYLSHKFHG
KGPGKNKIEKRLKKMEQDGLMKTMSSTDTPLGTLTMLQQKQKETKTAYVV
LSGNNKNVPGVSGSAIAKFK*

LD23187.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:46:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23360-PA 979 GF23360-PA 212..979 197..970 3346 89.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:46:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10289-PA 956 GG10289-PA 195..956 199..970 3581 95.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG6686-PA 970 CG6686-PA 1..970 1..970 4990 100 Plus
CG6686-PB 964 CG6686-PB 1..964 1..970 4941 99.4 Plus
CG6686-PC 109 CG6686-PC 1..84 1..84 445 100 Plus
CG2839-PA 826 CG2839-PA 313..816 8..521 322 24.1 Plus
CG2839-PA 826 CG2839-PA 289..794 4..605 301 22.7 Plus
CG7971-PG 1062 CG7971-PG 249..625 8..434 295 26 Plus
CG7971-PA 1062 CG7971-PA 249..625 8..434 295 26 Plus
CG7971-PC 1107 CG7971-PC 249..625 8..434 295 26 Plus
CG7971-PF 1655 CG7971-PF 474..850 8..434 295 26 Plus
CG2839-PA 826 CG2839-PA 264..755 111..673 294 21.5 Plus
CG2839-PA 826 CG2839-PA 266..749 105..603 292 24.4 Plus
CG7971-PG 1062 CG7971-PG 399..783 8..369 280 27.8 Plus
CG7971-PA 1062 CG7971-PA 399..783 8..369 280 27.8 Plus
CG7971-PC 1107 CG7971-PC 399..783 8..369 280 27.8 Plus
CG7971-PF 1655 CG7971-PF 624..1008 8..369 280 27.8 Plus
CG31797-PA 868 CG31797-PA 372..613 11..261 242 25.2 Plus
rudhira-PE 2075 CG43154-PE 1355..1656 110..427 238 28.3 Plus
rudhira-PC 2075 CG43154-PC 1355..1656 110..427 238 28.3 Plus
spen-PH 5458 CG18497-PH 1793..1988 4..238 232 28.1 Plus
spen-PC 5476 CG18497-PC 1811..2006 4..238 232 28.1 Plus
spen-PG 5487 CG18497-PG 1795..1990 4..238 232 28.1 Plus
spen-PE 5505 CG18497-PE 1813..2008 4..238 232 28.1 Plus
spen-PD 5505 CG18497-PD 1813..2008 4..238 232 28.1 Plus
spen-PF 5510 CG18497-PF 1818..2013 4..238 232 28.1 Plus
spen-PB 5533 CG18497-PB 1868..2063 4..238 232 28.1 Plus
spen-PA 5560 CG18497-PA 1868..2063 4..238 232 28.1 Plus
CG4119-PB 998 CG4119-PB 322..494 78..254 231 35.9 Plus
CG4119-PA 998 CG4119-PA 322..494 78..254 231 35.9 Plus
rgn-PD 800 CG6014-PD 324..784 126..610 229 22.6 Plus
rgn-PD 800 CG6014-PD 331..724 46..433 229 23.3 Plus
rgn-PA 800 CG6014-PA 324..784 126..610 229 22.6 Plus
rgn-PA 800 CG6014-PA 331..724 46..433 229 23.3 Plus
rgn-PC 808 CG6014-PC 332..792 126..610 229 22.6 Plus
rgn-PC 808 CG6014-PC 339..732 46..433 229 23.3 Plus
rgn-PB 808 CG6014-PB 332..792 126..610 229 22.6 Plus
rgn-PB 808 CG6014-PB 339..732 46..433 229 23.3 Plus
rudhira-PE 2075 CG43154-PE 1345..1658 14..366 228 22.3 Plus
rudhira-PC 2075 CG43154-PC 1345..1658 14..366 228 22.3 Plus
CG4119-PB 998 CG4119-PB 190..690 2..522 227 23.6 Plus
CG4119-PA 998 CG4119-PA 190..690 2..522 227 23.6 Plus
CG6227-PA 1224 CG6227-PA 2..503 3..537 226 24.7 Plus
rudhira-PE 2075 CG43154-PE 1364..1610 8..265 225 25.2 Plus
rudhira-PC 2075 CG43154-PC 1364..1610 8..265 225 25.2 Plus
CG7971-PG 1062 CG7971-PG 491..797 6..362 222 22.5 Plus
CG7971-PA 1062 CG7971-PA 491..797 6..362 222 22.5 Plus
CG7971-PC 1107 CG7971-PC 491..797 6..362 222 22.5 Plus
CG7971-PF 1655 CG7971-PF 716..1022 6..362 222 22.5 Plus
CG12075-PD 994 CG12075-PD 368..556 69..265 220 31.8 Plus
CG12075-PE 1006 CG12075-PE 380..568 69..265 220 31.8 Plus
CG12075-PC 1006 CG12075-PC 380..568 69..265 220 31.8 Plus
CG12075-PB 1006 CG12075-PB 380..568 69..265 220 31.8 Plus
CG12075-PA 1006 CG12075-PA 380..568 69..265 220 31.8 Plus
l(3)psg2-PA 1929 CG5146-PA 249..558 3..294 220 22.8 Plus
rudhira-PE 2075 CG43154-PE 1418..1651 8..243 218 24.3 Plus
rudhira-PC 2075 CG43154-PC 1418..1651 8..243 218 24.3 Plus
Flacc-PC 842 CG7358-PC 178..513 53..411 214 27.2 Plus
Flacc-PB 1139 CG7358-PB 178..513 53..411 214 27.2 Plus
Flacc-PA 1150 CG7358-PA 178..513 53..411 214 27.2 Plus
Flacc-PC 842 CG7358-PC 233..609 1..363 211 25.6 Plus
Flacc-PB 1139 CG7358-PB 233..609 1..363 211 25.6 Plus
Flacc-PA 1150 CG7358-PA 233..609 1..363 211 25.6 Plus
CG12877-PC 991 CG12877-PC 161..318 103..266 211 29.7 Plus
CG31551-PA 1393 CG31551-PA 374..989 15..626 210 20.2 Plus
rgn-PD 800 CG6014-PD 436..798 8..421 207 20.5 Plus
rgn-PA 800 CG6014-PA 436..798 8..421 207 20.5 Plus
rgn-PC 808 CG6014-PC 444..806 8..421 207 20.5 Plus
rgn-PB 808 CG6014-PB 444..806 8..421 207 20.5 Plus
CG8273-PB 874 CG8273-PB 128..365 8..266 207 25.5 Plus
CG8273-PA 874 CG8273-PA 128..365 8..266 207 25.5 Plus
CG31797-PA 868 CG31797-PA 426..671 9..267 206 25.1 Plus
spen-PH 5458 CG18497-PH 1747..1999 24..276 206 25.3 Plus
spen-PC 5476 CG18497-PC 1765..2017 24..276 206 25.3 Plus
spen-PG 5487 CG18497-PG 1749..2001 24..276 206 25.3 Plus
spen-PE 5505 CG18497-PE 1767..2019 24..276 206 25.3 Plus
spen-PD 5505 CG18497-PD 1767..2019 24..276 206 25.3 Plus
spen-PF 5510 CG18497-PF 1772..2024 24..276 206 25.3 Plus
spen-PB 5533 CG18497-PB 1822..2074 24..276 206 25.3 Plus
spen-PA 5560 CG18497-PA 1822..2074 24..276 206 25.3 Plus
rudhira-PE 2075 CG43154-PE 1384..1624 8..261 205 24.4 Plus
rudhira-PC 2075 CG43154-PC 1384..1624 8..261 205 24.4 Plus
CG8273-PB 874 CG8273-PB 153..377 113..367 204 25.8 Plus
CG8273-PA 874 CG8273-PA 153..377 113..367 204 25.8 Plus
ear-PC 931 CG4913-PC 393..803 5..455 203 21.2 Plus
ear-PA 931 CG4913-PA 393..803 5..455 203 21.2 Plus
ear-PB 945 CG4913-PB 393..803 5..455 203 21.2 Plus
CG7971-PG 1062 CG7971-PG 119..505 58..434 200 22.5 Plus
CG7971-PA 1062 CG7971-PA 119..505 58..434 200 22.5 Plus
CG7971-PC 1107 CG7971-PC 119..505 58..434 200 22.5 Plus
CG7971-PF 1655 CG7971-PF 344..730 58..434 200 22.5 Plus
ncm-PA 1330 CG12750-PA 976..1317 3..268 199 25.4 Plus
CG10600-PC 1376 CG10600-PC 179..298 117..235 197 34.7 Plus
CG10600-PB 1406 CG10600-PB 209..328 117..235 197 34.7 Plus
Mmp2-PC 606 CG1794-PC 195..337 116..265 196 31.8 Plus
CG13330-PA 611 CG13330-PA 264..471 101..269 196 33.2 Plus
Mmp2-PD 650 CG1794-PD 239..381 116..265 196 31.8 Plus
Mmp2-PB 758 CG1794-PB 347..489 116..265 196 31.8 Plus
CG10600-PC 1376 CG10600-PC 167..305 138..279 195 37.4 Plus
CG3918-PA 321 CG3918-PA 89..296 134..364 194 23.8 Plus
CG13330-PA 611 CG13330-PA 265..463 130..328 193 29.2 Plus
CG6066-PA 463 CG6066-PA 2..343 133..453 193 20.8 Plus
CG10600-PC 1376 CG10600-PC 175..306 133..269 191 30.7 Plus
CG10600-PB 1406 CG10600-PB 205..336 133..269 191 30.7 Plus
CG10600-PB 1406 CG10600-PB 201..335 142..279 189 37.8 Plus
CG31551-PA 1393 CG31551-PA 200..773 102..702 188 21 Plus
CG10600-PC 1376 CG10600-PC 167..288 132..266 184 35.3 Plus
CG10600-PB 1406 CG10600-PB 201..318 136..266 182 36.4 Plus
CG31797-PA 868 CG31797-PA 372..702 113..448 180 21.7 Plus
l(3)psg2-PA 1929 CG5146-PA 278..578 113..406 180 24.4 Plus
rudhira-PE 2075 CG43154-PE 1445..1753 12..327 177 21.8 Plus
rudhira-PC 2075 CG43154-PC 1445..1753 12..327 177 21.8 Plus
ncm-PA 1330 CG12750-PA 1136..1330 41..243 175 28 Plus
l(3)psg2-PA 1929 CG5146-PA 303..758 2..411 173 20 Plus
CG12075-PD 994 CG12075-PD 660..830 106..262 171 29.3 Plus
CG12075-PE 1006 CG12075-PE 672..842 106..262 171 29.3 Plus
CG12075-PC 1006 CG12075-PC 672..842 106..262 171 29.3 Plus
CG12075-PB 1006 CG12075-PB 672..842 106..262 171 29.3 Plus
CG12075-PA 1006 CG12075-PA 672..842 106..262 171 29.3 Plus
ncm-PA 1330 CG12750-PA 940..1096 97..261 164 20.6 Plus
ncm-PA 1330 CG12750-PA 954..1329 72..405 161 19.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:46:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17684-PA 935 GI17684-PA 1..935 39..970 3069 72.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:46:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19580-PA 945 GL19580-PA 1..945 1..970 3318 78.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:46:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19780-PA 935 GA19780-PA 1..935 1..970 3345 79.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:46:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26484-PA 971 GM26484-PA 1..971 1..970 4853 96.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22147-PA 626 GD22147-PA 190..607 198..614 1726 92.3 Plus
Dsim\GD22147-PA 626 GD22147-PA 582..626 926..970 240 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:46:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17470-PA 961 GJ17470-PA 18..961 19..970 3118 72.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14964-PA 912 GK14964-PA 92..912 169..970 2987 78 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:46:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12588-PA 970 GE12588-PA 198..970 198..970 3647 96.6 Plus

LD23187.hyp Sequence

Translation from 55 to 2967

> LD23187.hyp
MGSSSSGKKHKKDKKNRHRSRSSERPRRVTEDEDVTLDLTDDSSSRHRHH
KHKKHKEHRHKHHKQKERERANEVISLEESDSDSFSFFSGSDCVEVPVQA
QVQAQAKLRDARESSNRDKERDSGRDRELLRERERERDRERERDRDREKE
REREREKERLREREEREREREKERIREREKERLRERERERERERVRELTA
PPPPQISKHAEYESRREREIERERDARKRSGRERERERNRERSRSQSPAS
SSRKPATKEREPSSRSFSPIPENGAGDVLSITETNKLRAKLGLKPLEVDS
GPSKAGPPPGSSSQGEIKKPHGEADLSSYKDEWGEFLHKPADNLKEKREA
EKLREKLKQRKEKRFLEERLARIKTLGESDEETDNVSKWVDKNKRVVNER
EEAMRKAKELEELDEAFGVSEILEQEKTKARQRAYGDSNLKGLRVDHDMD
DFGEGRTVILTLKDQDVLNEEEGDTLVNVNMVDEERYKKNVANKKQNPLS
YGYNVYEEQYDELGNPIERSVLEKYDDEMEGQPKKRKNFVIGENMDEERE
HRRKLLEIKTKLAGKRLETLEDTNLQLASDTYSAEELAKFKKPKKKVKKL
RQKLKAEDLAPLAMGEASGSSDFGSRGGRYRDHEDAEMEEFKPQIKVEVE
DDDLERVLAKARKLKQKENIIKKPLPVDFESIQREIKPEHVEDTASGVVL
TGVDGNIVLNATAEFCRTLGDIPTYGMAGNRNEDSNDMMDFDKTEQPEEH
METHTDEPALSHGTWNSVNPDEVMQPADLDNLGEDLEDRAILDEEPDVGA
GVANALRLALSKGYLEKEEKNRPSNTKMAHLQAKNYSIEDKAAGEDEKVG
RRDRFHFGPITDFKDKETFKPNVKLDYIDDNGRILNLKEAFRYLSHKFHG
KGPGKNKIEKRLKKMEQDGLMKTMSSTDTPLGTLTMLQQKQKETKTAYVV
LSGNNKNVPGVSGSAIAKFK*

LD23187.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:30:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG6686-PA 970 CG6686-PA 1..970 1..970 4990 100 Plus
CG6686-PB 964 CG6686-PB 1..964 1..970 4941 99.4 Plus
CG6686-PC 109 CG6686-PC 1..84 1..84 445 100 Plus
CG2839-PA 826 CG2839-PA 313..816 8..521 322 24.1 Plus
CG2839-PA 826 CG2839-PA 289..794 4..605 301 22.7 Plus
CG7971-PG 1062 CG7971-PG 249..625 8..434 295 26 Plus
CG2839-PA 826 CG2839-PA 264..755 111..673 294 21.5 Plus
CG2839-PA 826 CG2839-PA 266..749 105..603 292 24.4 Plus