BDGP Sequence Production Resources |
Search the DGRC for LD23191
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 231 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | Got1-RA |
Protein status: | LD23191.pep: gold |
Preliminary Size: | 1797 |
Sequenced Size: | 1674 |
Gene | Date | Evidence |
---|---|---|
CG8430 | 2001-01-01 | Release 2 assignment |
CG8430 | 2001-10-10 | Blastp of sequenced clone |
CG8430 | 2003-01-01 | Sim4 clustering to Release 3 |
Got1 | 2008-04-29 | Release 5.5 accounting |
Got1 | 2008-08-15 | Release 5.9 accounting |
Got1 | 2008-12-18 | 5.12 accounting |
1674 bp (1674 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061313
> LD23191.complete CCGACACTATTCCAAATTAATTTATTTGTTATTGTCGCTCCGTTTGGACT TGTTTCCCAAGCTATCCACGATGTCCATCTACGCCGACGTTCCAAAAGGA CCCGCCATCGAGGTCTTCGCCCTGACGCAGGCCTTCAAGGACGACAGCAA TCCCAACAAGGTCAATTTGTCGGTGGGCGCTTACAGGACAGATGCTGGAG TTCCTTGGGTTTTGCCTGTGGTGCGCAAGACGGAAATCAGCATTGCCAGC GATGAGCAGGTTAACCACGAGTATTTGCCAGTGACTGGACTCGAAACATT CACCAATGCGGCCACTGAATTGGTTCTGGGTGCCGATTCCCCAGCCATCA AGGAGAATCGCGCCTTTGGAGTGCAGACCATTTCGGGCACGGGTGCCCTG CGCGTTGCCGCCGATTTCCTGCACACACAACTGAATCGCAATGTGGTTTA CTACTCGAACCCCACCTGGGAGAATCACCACAAGATCTTTTGCGATGCCG GCTTTACGACCGTTAAATCGTACCGCTACTGGGACCAAAATAAACGCGAG TTGGACTTCAAGAACATGCTGGCCGATCTGAACGATGCTCCGCCCGGTGC TGTGATCATTCTGCACGCCTGTGCCCACAATCCCACCGGCATTGATCCCA CCCAGGAGCAGTGGACTGAGCTGGCCGATCTGATGGAGAAGAAGAAGTTG TTCCCGCTGTTCGACTCGGCTTACCAGGGCTTTGCCAGTGGTGATCCCGA TCGCGATGCCTGGGCCGCTAGGTACTTCGTGCAGCGTGGCTTCGAGCTCT TCATCTGCCAGTCGTTCGCCAAGAACTTTGGCCTCTACTGCGAACGTACC GGCAATCTGGCTGTGGTGCAAAAGAATGGTGCTACCAAGGCAGCGGTTCA CTCTCAGCTGACGCTGCTCATTCGTGGACAGTACTCGAATCCGCCCGCGT ATGGAGCTCGCATCGTTTCCAAAGTCCTAAACACACCGGAGTTGCGCAAG GAGTGGATGGCCTCCATCCAGGCAATGTCGAGCCGCATCCGCGAGATGCG TACAGCTTTGCGGGACAAGCTGGTTGCCTTGGGCACCCCCGGCACCTGGG ATCACATTGTCAACCAGATCGGCATGTTCTCCTACACCGGTCTGAACGAG AGCCATGTTCGTGTGCTGATCGACCAGTACCACATTTACCTGCTGAAGAC GGGACGCATCAGCATGAGTGGCCTGAATAAGGGCAACGTTGAATATGTGG CCAAGGCGATCCATGCCGCTGTCACCGGATCAGGAGAAAGTGCATCATGT CCTTGCGAAAACAAATTGTAATCGTACCATTGGATCGCACCATTGGATAG ATACGTACAACGACTAGCTATGTACATATATTGGGCATGCGATTTAGAAA TCCCAAAGCTGGATCACAGATGTCTGCACCATTGGCATTTAAATCAAACC AACAACAATTGCAATTACTAAACGTTTATACGCGGCTTTTAGATGGATAT ACACATATTATACACCGGAAACGAATGTTCCACATTAAAGTAAAAACTTT ACAAAAATTACGCACTATTGAAAGCCGTCGAAGATTGGTTAAATAATTTA AGCTTACAACGTTTATTGACCTGTGTGTAGTAACTAAATAAATCGACAAT ATCATTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Got1-RA | 1726 | Got1-RA | 59..1715 | 1..1657 | 8285 | 100 | Plus |
Got1-RB | 1726 | Got1-RB | 123..1720 | 60..1657 | 7990 | 100 | Plus |
Got2-RB | 1560 | Got2-RB | 1183..1233 | 1096..1146 | 165 | 88.2 | Plus |
Got2-RB | 1560 | Got2-RB | 696..751 | 609..664 | 160 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12027952..12029246 | 362..1656 | 6325 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 12026037..12026215 | 1..179 | 895 | 100 | Plus |
chr2R | 21145070 | chr2R | 12027647..12027756 | 179..288 | 550 | 100 | Plus |
chr2R | 21145070 | chr2R | 12027817..12027892 | 287..362 | 380 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16140634..16141929 | 362..1657 | 6480 | 100 | Plus |
2R | 25286936 | 2R | 16138706..16138884 | 1..179 | 895 | 100 | Plus |
2R | 25286936 | 2R | 16140329..16140438 | 179..288 | 550 | 100 | Plus |
2R | 25286936 | 2R | 16140499..16140574 | 287..362 | 380 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16141833..16143128 | 362..1657 | 6480 | 100 | Plus |
2R | 25260384 | 2R | 16139905..16140083 | 1..179 | 895 | 100 | Plus |
2R | 25260384 | 2R | 16141528..16141637 | 179..288 | 550 | 100 | Plus |
2R | 25260384 | 2R | 16141698..16141773 | 287..362 | 380 | 100 | Plus |
2L | 23513712 | 2L | 1984839..1984889 | 1146..1096 | 165 | 88.2 | Minus |
2L | 23513712 | 2L | 1985321..1985376 | 664..609 | 160 | 85.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12026037..12026215 | 1..179 | 100 | -> | Plus |
chr2R | 12027648..12027755 | 180..287 | 100 | -> | Plus |
chr2R | 12027818..12027891 | 288..361 | 100 | -> | Plus |
chr2R | 12027952..12029246 | 362..1656 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Got1-RB | 49..1314 | 54..1321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Got1-RB | 49..1314 | 54..1321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Got1-RB | 49..1314 | 54..1321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Got1-RB | 49..1314 | 54..1321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Got1-RB | 49..1314 | 54..1321 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Got1-RA | 31..1686 | 1..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Got1-RA | 31..1686 | 1..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Got1-RA | 28..1683 | 1..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Got1-RA | 31..1686 | 1..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Got1-RA | 28..1683 | 1..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16138706..16138884 | 1..179 | 100 | -> | Plus |
2R | 16140330..16140437 | 180..287 | 100 | -> | Plus |
2R | 16140500..16140573 | 288..361 | 100 | -> | Plus |
2R | 16140634..16141928 | 362..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16138706..16138884 | 1..179 | 100 | -> | Plus |
2R | 16140330..16140437 | 180..287 | 100 | -> | Plus |
2R | 16140500..16140573 | 288..361 | 100 | -> | Plus |
2R | 16140634..16141928 | 362..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16138706..16138884 | 1..179 | 100 | -> | Plus |
2R | 16140330..16140437 | 180..287 | 100 | -> | Plus |
2R | 16140500..16140573 | 288..361 | 100 | -> | Plus |
2R | 16140634..16141928 | 362..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12026211..12026389 | 1..179 | 100 | -> | Plus |
arm_2R | 12027835..12027942 | 180..287 | 100 | -> | Plus |
arm_2R | 12028005..12028078 | 288..361 | 100 | -> | Plus |
arm_2R | 12028139..12029433 | 362..1656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16141833..16143127 | 362..1656 | 100 | Plus | |
2R | 16139905..16140083 | 1..179 | 100 | -> | Plus |
2R | 16141529..16141636 | 180..287 | 100 | -> | Plus |
2R | 16141699..16141772 | 288..361 | 100 | -> | Plus |
Translation from 0 to 1320
> LD23191.hyp RHYSKLIYLLLSLRLDLFPKLSTMSIYADVPKGPAIEVFALTQAFKDDSN PNKVNLSVGAYRTDAGVPWVLPVVRKTEISIASDEQVNHEYLPVTGLETF TNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLHTQLNRNVVY YSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGA VIILHACAHNPTGIDPTQEQWTELADLMEKKKLFPLFDSAYQGFASGDPD RDAWAARYFVQRGFELFICQSFAKNFGLYCERTGNLAVVQKNGATKAAVH SQLTLLIRGQYSNPPAYGARIVSKVLNTPELRKEWMASIQAMSSRIREMR TALRDKLVALGTPGTWDHIVNQIGMFSYTGLNESHVRVLIDQYHIYLLKT GRISMSGLNKGNVEYVAKAIHAAVTGSGESASCPCENKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Got1-PB | 437 | CG8430-PB | 18..437 | 20..439 | 2199 | 99.8 | Plus |
Got1-PA | 416 | CG8430-PA | 1..416 | 24..439 | 2185 | 100 | Plus |
Got2-PA | 424 | CG4233-PA | 9..420 | 9..421 | 941 | 46 | Plus |
Got2-PB | 431 | CG4233-PB | 34..427 | 27..421 | 938 | 46.9 | Plus |
Translation from 70 to 1320
> LD23191.pep MSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPV VRKTEISIASDEQVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFG VQTISGTGALRVAADFLHTQLNRNVVYYSNPTWENHHKIFCDAGFTTVKS YRYWDQNKRELDFKNMLADLNDAPPGAVIILHACAHNPTGIDPTQEQWTE LADLMEKKKLFPLFDSAYQGFASGDPDRDAWAARYFVQRGFELFICQSFA KNFGLYCERTGNLAVVQKNGATKAAVHSQLTLLIRGQYSNPPAYGARIVS KVLNTPELRKEWMASIQAMSSRIREMRTALRDKLVALGTPGTWDHIVNQI GMFSYTGLNESHVRVLIDQYHIYLLKTGRISMSGLNKGNVEYVAKAIHAA VTGSGESASCPCENKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11770-PA | 416 | GF11770-PA | 1..416 | 1..416 | 1959 | 84.6 | Plus |
Dana\GF15312-PA | 424 | GF15312-PA | 25..420 | 2..398 | 969 | 47 | Plus |
Dana\GF10678-PA | 674 | GF10678-PA | 249..643 | 1..398 | 694 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20572-PA | 436 | GG20572-PA | 21..436 | 1..416 | 2141 | 93.3 | Plus |
Dere\GG24563-PA | 424 | GG24563-PA | 27..420 | 4..398 | 980 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21676-PA | 413 | GH21676-PA | 4..406 | 2..404 | 1778 | 79.7 | Plus |
Dgri\GH25015-PA | 428 | GH25015-PA | 31..424 | 4..398 | 947 | 45.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Got1-PA | 416 | CG8430-PA | 1..416 | 1..416 | 2185 | 100 | Plus |
Got1-PB | 437 | CG8430-PB | 22..437 | 1..416 | 2185 | 100 | Plus |
Got2-PA | 424 | CG4233-PA | 27..420 | 4..398 | 938 | 46.9 | Plus |
Got2-PB | 431 | CG4233-PB | 34..427 | 4..398 | 938 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18831-PA | 410 | GI18831-PA | 4..404 | 2..402 | 1796 | 81.3 | Plus |
Dmoj\GI13534-PA | 441 | GI13534-PA | 27..429 | 2..404 | 1095 | 48.4 | Plus |
Dmoj\GI13682-PA | 427 | GI13682-PA | 30..423 | 4..398 | 924 | 45.3 | Plus |
Dmoj\GI11671-PA | 467 | GI11671-PA | 47..426 | 18..398 | 808 | 43.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10236-PA | 415 | GL10236-PA | 1..415 | 1..416 | 1919 | 84.4 | Plus |
Dper\GL18459-PA | 427 | GL18459-PA | 28..423 | 2..398 | 991 | 47.7 | Plus |
Dper\GL19583-PA | 462 | GL19583-PA | 37..433 | 1..398 | 687 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24132-PA | 415 | GA24132-PA | 1..415 | 1..416 | 1919 | 84.4 | Plus |
Dpse\GA18050-PA | 427 | GA18050-PA | 28..423 | 2..398 | 996 | 48 | Plus |
Dpse\GA26018-PA | 462 | GA26018-PA | 37..433 | 1..398 | 685 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21664-PA | 437 | GM21664-PA | 22..437 | 1..416 | 2201 | 96.6 | Plus |
Dsec\GM19419-PA | 148 | GM19419-PA | 1..148 | 269..416 | 767 | 95.9 | Plus |
Dsec\GM16578-PA | 1044 | GM16578-PA | 27..192 | 4..170 | 319 | 41.4 | Plus |
Dsec\GM13274-PA | 70 | GM13274-PA | 1..65 | 1..58 | 189 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11164-PA | 437 | GD11164-PA | 22..437 | 1..416 | 2201 | 96.6 | Plus |
Dsim\GD22881-PA | 424 | GD22881-PA | 27..420 | 4..398 | 964 | 46.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21858-PA | 411 | GJ21858-PA | 4..409 | 2..407 | 1787 | 78.8 | Plus |
Dvir\GJ13488-PA | 826 | GJ13488-PA | 2..406 | 2..410 | 1175 | 51.6 | Plus |
Dvir\GJ13489-PA | 421 | GJ13489-PA | 3..389 | 15..401 | 1121 | 53 | Plus |
Dvir\GJ17439-PA | 427 | GJ17439-PA | 30..423 | 4..398 | 947 | 46.1 | Plus |
Dvir\GJ11347-PA | 463 | GJ11347-PA | 47..426 | 18..398 | 792 | 42.4 | Plus |