BDGP Sequence Production Resources |
Search the DGRC for LD23193
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 231 |
Well: | 93 |
Vector: | pOT2 |
Associated Gene/Transcript | Nnp-1-RA |
Protein status: | LD23193.pep: gold |
Preliminary Size: | 3700 |
Sequenced Size: | 2836 |
Gene | Date | Evidence |
---|---|---|
CG12396 | 2001-01-01 | Release 2 assignment |
CG12396 | 2004-07-15 | Blastp of sequenced clone |
Nnp-1 | 2008-04-29 | Release 5.5 accounting |
Nnp-1 | 2008-08-15 | Release 5.9 accounting |
Nnp-1 | 2008-12-18 | 5.12 accounting |
2836 bp (2836 high quality bases) assembled on 2004-07-15
GenBank Submission: BT015271
> LD23193.complete CAACTAAAAGTTGAATTAGCCGGATAATGGTGACGCGCAAGAAGCCAGTT AAGCGCAACGCCGAGGCGGCCGAAATCCAGGTCGAGCAGGAGGAGGACGC TTCACAGCCGAAGGTGGCCAAGGAGCTGATGGTGGTCGCCCAGGAGGTGA AAATTATACGTGCTCTTGCCTGCAACGATGTGGTGGAGCGTAATCGCCAG ATCCGCATTTTGCGCAAGTGGTTCAAGGCGCGTGCCGGTAGCTCCTTTCC CTTCAACGAGGACGACTTCATGCGCATCTGGAAGGGATTGTACTACACCA TGTGGATGTCGGATAAGCCGCTGGTGCAGGAGGAGCTGGCCGAGAAGTTG GCTCAAATGGTGGACAGCTTCGGCGGTAATACGGCCTGCAGTCTGGCCTA CTTTAGTGCGTTTATGCGCACAATGTGCCAGGAGTACTTTGGCATAGATC AGTGGCGCATGGACAAATTCCTGATGCTCACCCGCCGCATGGTGCGTTAT CTACTGAGATTCCTCAAACAGAACAACTGGAATGCGGACCTGATAGCCGC ATTCAACAGCAGCATGCAGCTTTCTGTGATGTCGGAGCAGCCTAAGTCTC GCGGCATGACCATGCACTACCTAGATGTTTTCTTTGAGGAGCTGGCCAAG GCGGCCAATGGTGAGATCACTGCTGCTCAGGTTAATATGTTCTTGCGTCC GTTTGTCACCTACATTGCTACACAACGCGATGCTAAGCTAGTGGCACAGT GCCGCACAAGGGTACTCTATCATCTGATGTACCAGAGCGACTTAGGACGA CAGTACAGCGAAAAGTACAATGCCTGGAAGCAGATGGGTTTCCCCACCGC CTCCATTGATGACATTGAGAAACTAGATTCTGGATTTGACGAGGAGGATG ACGAGGTCAACGCCGAGGAGGAGCAGCCGCGGGCCACATCCTTGGATCCC CGAGCGGGCAACGTGGACGTTCACATGCCGGAGCTGCCGCTCAACGCTGA TTGCGTACTAGATGAGCTGCAGACGCAGCTACGCACCAACGATTTTAACA GCAAGAGACGCAAGGGATTGCGCAAACTTATCCAGATCTTTGAGACTTAC CAGAGAGGAGAGTTTCCACTTGGCGTGAGGACAATGCCAAAGGTGGAGGG ACAAACTCTGTCCGAAATGGTGGAGCAAAAAGTGGCTGCCTTAGATAAGA TGGAGGACGAGGTCTTTGCAACCGGAAGAAAACTGAAGAAGCTCAACAAA TCCAAACGCAAACGCCTACTGCAGTCCATTAACTTTGAGGAGGTGGACGA GCACAACTACGATGAGGTTATTAGCAAGGCTCTGCCTCCTGAGCTGCAGA AGAAGGTGAATTACAATGCAAAGGTGCGTTCTAGCATAAACAACGCATGG GTAGTAGAGGAGGTCAAGGAGGCCGAGCCCAAGTCGAAGAAAGCAAAAAA GGAAGAACCGCCACAGCAGAACAAAGATGACCAGACGAAGGTGAAGAAGA AAAGCCAGCTTAAGCCGAAGAATGACCAGTCCAAGCCCAAGATAGAGGAT CAACCGACCTTGAAGGCAGAAAAAGAAGAGCCTGCGAAGCGCAAGAAATT GGACCACTCCAAGACGAAGGAGGAGCAGTCGAAGCCGAAGACAGACGAGC AGCCCAAGCCCACACCTAAGGTGGAGGGACAGTCCAAGGCCAAGCCGACT CCCAAAACGAAGGCTGCCGGTGTTGATGATGATGCTCCGACCAACGGATG GGATGCCCCTTTAGAGGACGGTGAGCAGGACATCTTTGTTCCCTCTCGAA AACTGCAAGTGAAGCAGGCCAACAGTAAGCTGCCGCAGTCCACACCCAAA CAGCCTGCGCGCGCAGAGTTTGCGACTCCACAAACGGGCAGTGGCAAGCA TGTGCGGATCGTGACTAAGAGCAACTGCATCTACCCCAAGAGCGATTACT ACCGCCAGCTGAAGCTGTCTCCGCAGGTGCCCTACGACGCGAATCGGTTG CCCGGTAAGAGTGCCCTTAAGCCACACTGGATACCGGGACCGATTCATCC GAGCTACAAGGCCAAGCGCTTGTTCAACGACACTCTGTGACAAAGCGTCT AGTGGCAGCGACTGGGATTGGGACAGGATGAGGAAGATTAATTTGGACTT AGTGCTCTGAGGGACGATGAAGAAGGGGGAGCGCTTCGCATCATACTACT TCCTTATAAGGCAGTATAAGATAACACATCCACAATAGGCATGTCTTATG CTGGTTTTATAATACGTCTATACACACGAAAGTTTCCATGCTATATTTTT CTATTTTACAATGTTAAAGCCCTTTTGTTTAGTTTCGAGAGCACCGTTAC TATGCTTAAATATTTCAATTTTCTAGAATAGTTGAAATTTACGATAGTTC CGTGTTGCCTTGACTAATTTCTACTCAAATAAAATCCGTATAAGACATGT ACTAAATGTAATCCCCTAATCTTTTAGTAGTTACAATTACGACTTAAAAT ACTATTGCTTGTAGGCCATTTTATCGTTCAAGCTATCCTCTGATCTGAGT TGAAATAAAAGCAAACGTAGTATATGTAAAATCAAATACGAATCACAAAG TTTATTTAATTACCAGGTACAGAAAGAACTAAGTAATTTAGCATTTTGAT GGGCTAACAATTCCAGCTTTCAAATTTCAAAACTATATTTTTTCGAGCAG AGAATGGGGAAAACGAATGTATATCAATAGCTATTTGATAGTTAATAGCT TATTATTATACCAACATTTTGAAAATAAATATGTCATTATTATTTTAAAA AAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nnp-1-RA | 2889 | Nnp-1-RA | 87..2882 | 1..2797 | 13945 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13361981..13364776 | 2797..1 | 13845 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13363307..13366102 | 2797..1 | 13935 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13363307..13366102 | 2797..1 | 13945 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
FB | 1106 | FB DMTNFB 1106bp AKA(J01084) Derived from V00246 (g8708) (Rel. 36, Last updated, Version 3). | 13..67 | 2702..2649 | 173 | 81.8 | Minus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1135..1211 | 2720..2797 | 144 | 66.7 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 992..1127 | 2659..2797 | 138 | 59.6 | Plus |
rooA | 7621 | rooA ROOA_LTR 7621bp | 6139..6234 | 2564..2470 | 126 | 60.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13361982..13364776 | 1..2796 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nnp-1-RA | 1..2064 | 27..2090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nnp-1-RA | 1..2064 | 27..2090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nnp-1-RA | 1..2064 | 27..2090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nnp-1-RA | 1..2064 | 27..2090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nnp-1-RA | 1..2064 | 27..2090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nnp-1-RA | 87..2881 | 1..2796 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nnp-1-RA | 87..2881 | 1..2796 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nnp-1-RA | 88..2882 | 1..2796 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nnp-1-RA | 87..2881 | 1..2796 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nnp-1-RA | 88..2882 | 1..2796 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13363308..13366102 | 1..2796 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13363308..13366102 | 1..2796 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13363308..13366102 | 1..2796 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13363308..13366102 | 1..2796 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13363308..13366102 | 1..2796 | 99 | Minus |
Translation from 26 to 2089
> LD23193.hyp MVTRKKPVKRNAEAAEIQVEQEEDASQPKVAKELMVVAQEVKIIRALACN DVVERNRQIRILRKWFKARAGSSFPFNEDDFMRIWKGLYYTMWMSDKPLV QEELAEKLAQMVDSFGGNTACSLAYFSAFMRTMCQEYFGIDQWRMDKFLM LTRRMVRYLLRFLKQNNWNADLIAAFNSSMQLSVMSEQPKSRGMTMHYLD VFFEELAKAANGEITAAQVNMFLRPFVTYIATQRDAKLVAQCRTRVLYHL MYQSDLGRQYSEKYNAWKQMGFPTASIDDIEKLDSGFDEEDDEVNAEEEQ PRATSLDPRAGNVDVHMPELPLNADCVLDELQTQLRTNDFNSKRRKGLRK LIQIFETYQRGEFPLGVRTMPKVEGQTLSEMVEQKVAALDKMEDEVFATG RKLKKLNKSKRKRLLQSINFEEVDEHNYDEVISKALPPELQKKVNYNAKV RSSINNAWVVEEVKEAEPKSKKAKKEEPPQQNKDDQTKVKKKSQLKPKND QSKPKIEDQPTLKAEKEEPAKRKKLDHSKTKEEQSKPKTDEQPKPTPKVE GQSKAKPTPKTKAAGVDDDAPTNGWDAPLEDGEQDIFVPSRKLQVKQANS KLPQSTPKQPARAEFATPQTGSGKHVRIVTKSNCIYPKSDYYRQLKLSPQ VPYDANRLPGKSALKPHWIPGPIHPSYKAKRLFNDTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nnp-1-PA | 687 | CG12396-PA | 1..687 | 1..687 | 3573 | 100 | Plus |
Translation from 26 to 2089
> LD23193.pep MVTRKKPVKRNAEAAEIQVEQEEDASQPKVAKELMVVAQEVKIIRALACN DVVERNRQIRILRKWFKARAGSSFPFNEDDFMRIWKGLYYTMWMSDKPLV QEELAEKLAQMVDSFGGNTACSLAYFSAFMRTMCQEYFGIDQWRMDKFLM LTRRMVRYLLRFLKQNNWNADLIAAFNSSMQLSVMSEQPKSRGMTMHYLD VFFEELAKAANGEITAAQVNMFLRPFVTYIATQRDAKLVAQCRTRVLYHL MYQSDLGRQYSEKYNAWKQMGFPTASIDDIEKLDSGFDEEDDEVNAEEEQ PRATSLDPRAGNVDVHMPELPLNADCVLDELQTQLRTNDFNSKRRKGLRK LIQIFETYQRGEFPLGVRTMPKVEGQTLSEMVEQKVAALDKMEDEVFATG RKLKKLNKSKRKRLLQSINFEEVDEHNYDEVISKALPPELQKKVNYNAKV RSSINNAWVVEEVKEAEPKSKKAKKEEPPQQNKDDQTKVKKKSQLKPKND QSKPKIEDQPTLKAEKEEPAKRKKLDHSKTKEEQSKPKTDEQPKPTPKVE GQSKAKPTPKTKAAGVDDDAPTNGWDAPLEDGEQDIFVPSRKLQVKQANS KLPQSTPKQPARAEFATPQTGSGKHVRIVTKSNCIYPKSDYYRQLKLSPQ VPYDANRLPGKSALKPHWIPGPIHPSYKAKRLFNDTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21670-PA | 670 | GF21670-PA | 1..670 | 1..687 | 2605 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10208-PA | 698 | GG10208-PA | 1..698 | 1..687 | 3214 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13456-PA | 694 | GH13456-PA | 1..694 | 1..687 | 2145 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nnp-1-PA | 687 | CG12396-PA | 1..687 | 1..687 | 3573 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14071-PA | 353 | GI14071-PA | 1..333 | 1..330 | 1373 | 76 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25715-PA | 657 | GL25715-PA | 1..657 | 1..687 | 2515 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11606-PA | 654 | GA11606-PA | 1..654 | 1..687 | 2537 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25620-PA | 665 | GM25620-PA | 1..665 | 1..687 | 3316 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22068-PA | 686 | GD22068-PA | 1..686 | 1..687 | 3500 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18264-PA | 680 | GJ18264-PA | 1..680 | 1..687 | 2338 | 68.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15286-PA | 635 | GK15286-PA | 1..571 | 1..556 | 1891 | 65.6 | Plus |
Dwil\GK15286-PA | 635 | GK15286-PA | 501..635 | 561..687 | 421 | 62.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11688-PA | 697 | GE11688-PA | 1..697 | 1..687 | 3120 | 89.3 | Plus |