BDGP Sequence Production Resources |
Search the DGRC for LD23375
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 233 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | ZnT86D-RA |
Protein status: | LD23375.pep: gold |
Preliminary Size: | 2033 |
Sequenced Size: | 2006 |
Gene | Date | Evidence |
---|---|---|
CG6672 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6672 | 2002-04-25 | Blastp of sequenced clone |
CG6672 | 2008-04-29 | Release 5.5 accounting |
CG6672 | 2008-08-15 | Release 5.9 accounting |
CG6672 | 2008-12-18 | 5.12 accounting |
2006 bp (2006 high quality bases) assembled on 2002-04-25
GenBank Submission: AY113365
> LD23375.complete CAGATTGGTTTGGTGCTGGCAAAGACGGGAGTTCGGTTCTGGTATCTGGT ACCCAGTAAAAATGAATTAAGCTGCAGCTGAATCGCAGATCGACGAGCCC GCGCCGCACAACTGCGCACACAAGACGACGACGACGACGAAGTCGCGCAG GAAGCATTTTGCTTGTGAGATAATTTGGGAATCAAAGAAAAGAGACCTGC CGCCGCCGCCGTTGCCGATAAAGATTCTCGCGAACCCGGCCAGAAGCGGA GTGGGAATCACGGAATCAGCTGGAGCGCGGCTATAGCCAACCGATAATAC CACATCCATAACCGGCAAGATGATACCGCTGTCGCACAAGGACCGGAGCA GTCTGGGCTACCGGATCCGGGAGAAGCTCAACAGCTGGAAACGACTCATC TTCTCCGACCGCAACTCCCGGAATCTGTTCCTCTTTCTGCTGCTCAACCT GAGCTTCGCCTTCGTGGAGCTCTTCTACGGCATTGTGACGAACAGTTTGG GCCTGATCTCCGACTCATTCCACATGTTCTTCGACTGCACTGGCCTCTTG GCGGGACTGGCCGCGTCGGTTATCACCAAGTGGAAGGCCAACGACAAGTT CTCCTACGGCTATGTGCGCGCCGAGGTGCTGGCCGGCTTCGTGAATAGCC TGTTCCTGTTGTTCATAGCCTTCTTCATTCTGTCGGAGGGCGTGGAGCGA CTTATCGAACCGCCGGAGGTCAAGCACGAGCGTCTGTTTGTCGTCTCCGT GCTGGGACTGCTGGTGAACCTGGTGGGCATCTATGCCTTCAATCACGGCG GACATGGACACTCGCACGGTGGACACGGACACTCCCACGGTGGTGGTCAT GGGCACGGGCACTCGCACGGCCACACGGACGCCGGCAATCACAATCACCA AGCCATCACCTTGGACAATGGCCATGGACACTCACACGATCACGACAGCC ATGGCCACTCGCACGGCGACATGTCGGGCAGCAACTCGCAGATCATGCGC GGCGTCTTCCTGCACATCCTGGCGGACACTTTGGGTTCGGTGGGCGTGAT CATCTCGGCGGTGCTGATGCACATGTTCGGCTGGATGATAGCGGACCCCA TTTGCTCCATCTTCATAGCCTTGCTGATAGCGCTCAGTGTGCTGAGTCTG ATCAAGGAGTCGATCATGATCCTGATGCAGCGACAACCCGCCGACCTGGA CCGATCGCTGCCGCAGTGCTATCAGAAAGTCACCGGCCTGGCTGGCGTTT ACGCTGTGCAGGAGCCGCACTTCTGGACCCTTTGCTCCGATGTCTATGTG GGCGCACTCAAGCTGGAGGTGTCCAAGAACGTCGATCCCAAGTACGTGGT GACGCACACACGGATGATCTTTGAGGCGGTGGGCGTCAAGCAGATCTACA TACAGTTGGATTATGTTTGATGCCAATGGGATCGACCCACCGGTGTCCTT GTACAATGATCTGTATAGTTATCAGCGCATGTTGAATGTTTGTGGGCAGT GCGACTCAAACATTATGAAATTTTAGTATACTACGGCGCCACAATACCCC GCCCATCACTTCCGAATGTCCCCTCCAAGAGCTAAGTAAAAGAAAGTGTT TGATTTTCAGTTGTACTTTCCGAATTTTTGTTAACTTATTAACGTTTGTA TTTGTTGAAATGCGTTCGGCATTCATTCCAATTCTATACATACTGAAAGC ATGGCATAACTTATGCAATAGTCCATATCGAGGAGCATTAGTGTAATTGT AAGCTAAGCGAAAGATTTTGTGCAAAGGTAAATATAAATATTTAAAGATT TTTTAAAATTCAGCATGAACAAAACCAGAAAATAGCAACTAATTCTGACT GACATTTCCATGGACATTCCGCCGTGCGGTGGAAGTGCATTTGGTGAATC GTTTTTGCCACAGTTTGAAGCATCAAAATTATGAACGAAATAAAATTTAA TTTGTTATTAGCATTTTTATACGTAAACCGAAAAAAACAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6672-RA | 2156 | CG6672-RA | 109..2090 | 1..1982 | 9910 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7037889..7038951 | 1982..920 | 5300 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 7039039..7039460 | 921..500 | 2110 | 100 | Minus |
chr3R | 27901430 | chr3R | 7039797..7040099 | 303..1 | 1470 | 99 | Minus |
chr3R | 27901430 | chr3R | 7039530..7039727 | 501..304 | 990 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 11212306..11213368 | 1982..920 | 5315 | 100 | Minus |
3R | 32079331 | 3R | 11213456..11213877 | 921..500 | 2110 | 100 | Minus |
3R | 32079331 | 3R | 11214214..11214516 | 303..1 | 1515 | 100 | Minus |
3R | 32079331 | 3R | 11213947..11214144 | 501..304 | 990 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 10953137..10954199 | 1982..920 | 5315 | 100 | Minus |
3R | 31820162 | 3R | 10954287..10954708 | 921..500 | 2110 | 100 | Minus |
3R | 31820162 | 3R | 10955045..10955347 | 303..1 | 1515 | 100 | Minus |
3R | 31820162 | 3R | 10954778..10954975 | 501..304 | 990 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7037882..7038950 | 921..1988 | 96 | <- | Minus |
chr3R | 7039040..7039459 | 501..920 | 100 | <- | Minus |
chr3R | 7039531..7039727 | 304..500 | 100 | <- | Minus |
chr3R | 7039797..7040099 | 1..303 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6672-RA | 1..1101 | 320..1420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6672-RA | 1..1101 | 320..1420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6672-RA | 1..1101 | 320..1420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6672-RA | 1..1101 | 320..1420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ZnT86D-RA | 1..1101 | 320..1420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6672-RA | 2..1988 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6672-RA | 2..1988 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6672-RA | 24..2003 | 1..1980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6672-RA | 2..1988 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ZnT86D-RA | 24..2003 | 1..1980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11213948..11214144 | 304..500 | 100 | <- | Minus |
3R | 11212299..11213367 | 921..1988 | 99 | <- | Minus |
3R | 11213457..11213876 | 501..920 | 100 | <- | Minus |
3R | 11214214..11214516 | 1..303 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11213948..11214144 | 304..500 | 100 | <- | Minus |
3R | 11212299..11213367 | 921..1988 | 99 | <- | Minus |
3R | 11213457..11213876 | 501..920 | 100 | <- | Minus |
3R | 11214214..11214516 | 1..303 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11213948..11214144 | 304..500 | 100 | <- | Minus |
3R | 11212299..11213367 | 921..1988 | 99 | <- | Minus |
3R | 11213457..11213876 | 501..920 | 100 | <- | Minus |
3R | 11214214..11214516 | 1..303 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7039936..7040238 | 1..303 | 100 | Minus | |
arm_3R | 7038021..7039089 | 921..1988 | 99 | <- | Minus |
arm_3R | 7039179..7039598 | 501..920 | 100 | <- | Minus |
arm_3R | 7039670..7039866 | 304..500 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10953130..10954198 | 921..1988 | 99 | <- | Minus |
3R | 10954288..10954707 | 501..920 | 100 | <- | Minus |
3R | 10954779..10954975 | 304..500 | 100 | <- | Minus |
3R | 10955045..10955347 | 1..303 | 100 | Minus |
Translation from 319 to 1419
> LD23375.pep MIPLSHKDRSSLGYRIREKLNSWKRLIFSDRNSRNLFLFLLLNLSFAFVE LFYGIVTNSLGLISDSFHMFFDCTGLLAGLAASVITKWKANDKFSYGYVR AEVLAGFVNSLFLLFIAFFILSEGVERLIEPPEVKHERLFVVSVLGLLVN LVGIYAFNHGGHGHSHGGHGHSHGGGHGHGHSHGHTDAGNHNHQAITLDN GHGHSHDHDSHGHSHGDMSGSNSQIMRGVFLHILADTLGSVGVIISAVLM HMFGWMIADPICSIFIALLIALSVLSLIKESIMILMQRQPADLDRSLPQC YQKVTGLAGVYAVQEPHFWTLCSDVYVGALKLEVSKNVDPKYVVTHTRMI FEAVGVKQIYIQLDYV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18257-PA | 372 | GF18257-PA | 1..372 | 1..366 | 1500 | 89.5 | Plus |
Dana\GF10205-PA | 451 | GF10205-PA | 4..338 | 28..365 | 334 | 30.6 | Plus |
Dana\GF13836-PA | 504 | GF13836-PA | 126..500 | 29..364 | 304 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17239-PA | 366 | GG17239-PA | 1..366 | 1..366 | 1891 | 98.9 | Plus |
Dere\GG15123-PA | 449 | GG15123-PA | 4..338 | 28..365 | 299 | 32.4 | Plus |
Dere\GG10848-PA | 491 | GG10848-PA | 132..487 | 36..352 | 246 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19326-PA | 371 | GH19326-PA | 1..371 | 1..366 | 1480 | 90 | Plus |
Dgri\GH17056-PA | 524 | GH17056-PA | 4..337 | 28..365 | 296 | 30.5 | Plus |
Dgri\GH20420-PA | 487 | GH20420-PA | 147..436 | 36..319 | 180 | 24.1 | Plus |
Dgri\GH10815-PA | 466 | GH10815-PA | 75..428 | 31..344 | 150 | 20.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZnT86D-PA | 366 | CG6672-PA | 1..366 | 1..366 | 1926 | 100 | Plus |
ZnT63C-PG | 449 | CG17723-PG | 11..338 | 36..365 | 434 | 34.7 | Plus |
ZnT63C-PE | 449 | CG17723-PE | 11..338 | 36..365 | 434 | 34.7 | Plus |
ZnT63C-PD | 449 | CG17723-PD | 11..338 | 36..365 | 434 | 34.7 | Plus |
ZnT63C-PC | 449 | CG17723-PC | 11..338 | 36..365 | 434 | 34.7 | Plus |
ZnT63C-PB | 449 | CG17723-PB | 11..338 | 36..365 | 434 | 34.7 | Plus |
ZnT63C-PA | 449 | CG17723-PA | 11..338 | 36..365 | 434 | 34.7 | Plus |
ZnT63C-PF | 545 | CG17723-PF | 11..338 | 36..365 | 434 | 34.7 | Plus |
ZnT41F-PD | 498 | CG11163-PD | 133..494 | 36..364 | 311 | 24.5 | Plus |
ZnT41F-PC | 498 | CG11163-PC | 133..494 | 36..364 | 311 | 24.5 | Plus |
ZnT41F-PB | 498 | CG11163-PB | 133..494 | 36..364 | 311 | 24.5 | Plus |
ZnT41F-PA | 498 | CG11163-PA | 133..494 | 36..364 | 311 | 24.5 | Plus |
ZnT35C-PB | 440 | CG3994-PB | 57..402 | 34..344 | 287 | 24 | Plus |
ZnT35C-PA | 472 | CG3994-PA | 89..434 | 34..344 | 287 | 24 | Plus |
ZnT33D-PB | 701 | CG31860-PB | 339..649 | 34..364 | 264 | 22.5 | Plus |
Catsup-PA | 449 | CG10449-PA | 66..140 | 158..238 | 155 | 38.3 | Plus |
Cpr35B-PA | 218 | CG3474-PA | 141..214 | 159..216 | 150 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23936-PA | 374 | GI23936-PA | 1..374 | 1..366 | 1521 | 86.6 | Plus |
Dmoj\GI12061-PA | 513 | GI12061-PA | 4..337 | 28..365 | 287 | 32.5 | Plus |
Dmoj\GI19603-PA | 485 | GI19603-PA | 148..459 | 35..344 | 211 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12040-PA | 373 | GL12040-PA | 1..373 | 1..366 | 1494 | 91.2 | Plus |
Dper\GL16135-PA | 450 | GL16135-PA | 4..340 | 28..365 | 326 | 32.9 | Plus |
Dper\GL20059-PA | 539 | GL20059-PA | 163..488 | 35..319 | 154 | 24.2 | Plus |
Dper\GL25722-PA | 482 | GL25722-PA | 311..444 | 212..344 | 151 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26171-PA | 373 | GA26171-PA | 1..373 | 1..366 | 1490 | 91.4 | Plus |
Dpse\GA14626-PA | 450 | GA14626-PA | 4..340 | 28..365 | 326 | 32.9 | Plus |
Dpse\GA16530-PB | 716 | GA16530-PB | 370..681 | 34..364 | 230 | 22 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26118-PA | 366 | GM26118-PA | 1..366 | 1..366 | 1908 | 99.5 | Plus |
Dsec\GM14558-PA | 445 | GM14558-PA | 4..338 | 28..365 | 300 | 32.4 | Plus |
Dsec\GM16498-PA | 497 | GM16498-PA | 116..495 | 13..354 | 225 | 20.7 | Plus |
Dsec\GM26751-PA | 1509 | GM26751-PA | 661..966 | 30..364 | 210 | 20.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20678-PA | 366 | GD20678-PA | 1..366 | 1..366 | 1913 | 99.7 | Plus |
Dsim\GD13749-PA | 449 | GD13749-PA | 4..338 | 28..365 | 298 | 32.4 | Plus |
Dsim\GD10349-PA | 500 | GD10349-PA | 125..498 | 29..354 | 233 | 22.1 | Plus |
Dsim\GD21968-PA | 543 | GD21968-PA | 152..505 | 31..344 | 171 | 21.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10296-PA | 370 | GJ10296-PA | 1..370 | 1..366 | 1465 | 90 | Plus |
Dvir\GJ13331-PA | 529 | GJ13331-PA | 4..337 | 28..365 | 292 | 32.5 | Plus |
Dvir\GJ15930-PA | 475 | GJ15930-PA | 79..437 | 31..344 | 184 | 20.2 | Plus |
Dvir\GJ18417-PA | 498 | GJ18417-PA | 151..447 | 36..319 | 167 | 18.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13273-PA | 369 | GK13273-PA | 1..369 | 1..366 | 1459 | 87.8 | Plus |
Dwil\GK16756-PA | 562 | GK16756-PA | 4..338 | 28..365 | 310 | 31.5 | Plus |
Dwil\GK19068-PA | 685 | GK19068-PA | 299..609 | 34..344 | 233 | 21.4 | Plus |
Dwil\GK18061-PA | 480 | GK18061-PA | 85..442 | 31..344 | 203 | 20.6 | Plus |
Dwil\GK21764-PA | 572 | GK21764-PA | 191..527 | 31..327 | 192 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24639-PA | 366 | GE24639-PA | 1..366 | 1..366 | 1894 | 98.9 | Plus |
Dyak\GE21350-PA | 449 | GE21350-PA | 4..338 | 28..365 | 297 | 32.4 | Plus |
Dyak\GE19441-PA | 492 | GE19441-PA | 133..490 | 36..354 | 228 | 22 | Plus |
Translation from 319 to 1419
> LD23375.hyp MIPLSHKDRSSLGYRIREKLNSWKRLIFSDRNSRNLFLFLLLNLSFAFVE LFYGIVTNSLGLISDSFHMFFDCTGLLAGLAASVITKWKANDKFSYGYVR AEVLAGFVNSLFLLFIAFFILSEGVERLIEPPEVKHERLFVVSVLGLLVN LVGIYAFNHGGHGHSHGGHGHSHGGGHGHGHSHGHTDAGNHNHQAITLDN GHGHSHDHDSHGHSHGDMSGSNSQIMRGVFLHILADTLGSVGVIISAVLM HMFGWMIADPICSIFIALLIALSVLSLIKESIMILMQRQPADLDRSLPQC YQKVTGLAGVYAVQEPHFWTLCSDVYVGALKLEVSKNVDPKYVVTHTRMI FEAVGVKQIYIQLDYV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZnT86D-PA | 366 | CG6672-PA | 1..366 | 1..366 | 1926 | 100 | Plus |
ZnT63C-PG | 449 | CG17723-PG | 11..338 | 36..365 | 434 | 34.7 | Plus |
ZnT63C-PE | 449 | CG17723-PE | 11..338 | 36..365 | 434 | 34.7 | Plus |
ZnT63C-PD | 449 | CG17723-PD | 11..338 | 36..365 | 434 | 34.7 | Plus |
ZnT63C-PC | 449 | CG17723-PC | 11..338 | 36..365 | 434 | 34.7 | Plus |