BDGP Sequence Production Resources |
Search the DGRC for LD23405
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 234 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6712-RA |
Protein status: | LD23405.pep: gold |
Preliminary Size: | 1452 |
Sequenced Size: | 1314 |
Gene | Date | Evidence |
---|---|---|
CG6712 | 2001-01-01 | Release 2 assignment |
CG6712 | 2001-07-04 | Blastp of sequenced clone |
CG6712 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6712 | 2008-04-29 | Release 5.5 accounting |
CG6712 | 2008-08-15 | Release 5.9 accounting |
CG6712 | 2008-12-18 | 5.12 accounting |
1314 bp (1314 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051683
> LD23405.complete ATCAACACGTGCCGCTCGCATTTTTGTGAATTCGTGATTCTCTCGGAATA ATGATAAAAATTAAGCGAAAAACAGCCCCTCCGCCCGTGGAACAGGACTC GGACAGCGATTCCAGCTTTGACGAGGAGGAGCCACAGGATTTGGAAGTCC AGGAGGGGCCAGTCACTGATAGCAGCGATGAAGAAGCCGCCTCCAGCAGC AAAAAAACGGCCAAACAAGGGGAAGCCAGTGAGGATTTAAAGGAAGAGGA TGATGACGACGATGAGGAGGAGAATGACGACGACGACGAAGAAGAGGATG ATGACGACGACGACGACAAGAAGACACGAATTCCTGTTTTGAATCCCCTC AGCTGGATGCGCAACAAGGAGCAGCGTTTGGCGTTGTACAAAAAAATGAA GAAGGAGAAGCACAAGAAAAAAATGCAGGAGCGCCGTGCCCGACGGAAGG CTGGTGTACCCGCCAATCCTGGTCACACCATAGAGAGCCTGCGAGAGAAG GACCAAACAGAGGTGGCCAATCTGAACGATTCCGACAACGAGGAGTTGCA AAAGGAACTCCAACTGGACGATTTCAGCTCGTACTTCGAACGTTCGTACG AGCCAAAGGTGCTGATCACTTTTGCTGACAATCCGGTGACCAAGACGCGT AAGTTTGGACTGGAGCTTTCGCGCATATTCCCCAACGCCCTGGTTAAGAT TCGCAACAAGTCGTCGGTGAAGAAGATATGCAAAAGCGCCGAGCGCGAGG AGTTCACAGACGTCGTGATCGTTAACGAAGATCGCAGAAAGCCCAATGGG CTGCTGGTCATTCATCTGCCCAATGGTCCCACTGCCCACTTCAAGCTGTC CAACGTGAAGCTCACCTCGGACATAAAGCGCGATCACAAGGAGATAACCA AGCACAGGCCCGAAGTGATCCTGAACAATTTTACCACACGTTTGGGTCTG ACCGTGGGCCGCATGCTGGGTGCCCTCTTCCATCACGATCCCGAGTTCCG CGGCCGCCGAGCGGTGACGTTCCACAATCAGCGAGATTACATATTCTTCC GTCACCACCGCTACGAGTTCACCAAAGAGGGAAAACGCGTAAAGCTGCGC GAACTGGGGCCGCGGTTCACCCTGAAACTACGTTCCCTGCAGGAGGGCAC ATTCGACAGCAAGACCGGTGACTATGCCTGGATAATCAGCAACAAACGGC ACGCCATGGAGTCGCGACGTCGCTTCTTCCTCTAGGTGTATTTCGAGGCA TTGTATTTAGGTATAGAACTACTTAATAAACCAACAGTTAATACGAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6712-RA | 1335 | CG6712-RA | 41..1335 | 1..1295 | 6475 | 100 | Plus |
CG5325-RA | 1327 | CG5325-RA | 1203..1327 | 1299..1175 | 625 | 100 | Minus |
CG5325-RB | 1330 | CG5325-RB | 1206..1330 | 1299..1175 | 625 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 12093840..12095134 | 1295..1 | 6325 | 99.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12095172..12096470 | 1299..1 | 6495 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12095172..12096470 | 1299..1 | 6495 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12093840..12094817 | 318..1295 | 99 | == | Minus |
chr2L | 12094887..12095134 | 1..248 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6712-RA | 1..1185 | 51..1235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6712-RA | 1..1185 | 51..1235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6712-RA | 1..1185 | 51..1235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6712-RA | 1..1185 | 51..1235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6712-RA | 1..1185 | 51..1235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6712-RA | 41..1335 | 1..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6712-RA | 41..1335 | 1..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6712-RA | 42..1336 | 1..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6712-RA | 41..1335 | 1..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6712-RA | 42..1336 | 1..1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12095176..12096470 | 1..1295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12095176..12096470 | 1..1295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12095176..12096470 | 1..1295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12095176..12096470 | 1..1295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12095176..12096470 | 1..1295 | 100 | Minus |
Translation from 50 to 1234
> LD23405.hyp MIKIKRKTAPPPVEQDSDSDSSFDEEEPQDLEVQEGPVTDSSDEEAASSS KKTAKQGEASEDLKEEDDDDDEEENDDDDEEEDDDDDDDKKTRIPVLNPL SWMRNKEQRLALYKKMKKEKHKKKMQERRARRKAGVPANPGHTIESLREK DQTEVANLNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTR KFGLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNG LLVIHLPNGPTAHFKLSNVKLTSDIKRDHKEITKHRPEVILNNFTTRLGL TVGRMLGALFHHDPEFRGRRAVTFHNQRDYIFFRHHRYEFTKEGKRVKLR ELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL*
Translation from 50 to 1234
> LD23405.pep MIKIKRKTAPPPVEQDSDSDSSFDEEEPQDLEVQEGPVTDSSDEEAASSS KKTAKQGEASEDLKEEDDDDDEEENDDDDEEEDDDDDDDKKTRIPVLNPL SWMRNKEQRLALYKKMKKEKHKKKMQERRARRKAGVPANPGHTIESLREK DQTEVANLNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTR KFGLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNG LLVIHLPNGPTAHFKLSNVKLTSDIKRDHKEITKHRPEVILNNFTTRLGL TVGRMLGALFHHDPEFRGRRAVTFHNQRDYIFFRHHRYEFTKEGKRVKLR ELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23434-PA | 389 | GF23434-PA | 1..389 | 1..394 | 1608 | 85 | Plus |
Dana\GF17886-PA | 298 | GF17886-PA | 80..271 | 184..378 | 339 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10274-PA | 394 | GG10274-PA | 1..394 | 1..394 | 1696 | 95.4 | Plus |
Dere\GG11358-PA | 298 | GG11358-PA | 80..285 | 184..394 | 339 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10194-PA | 400 | GH10194-PA | 1..400 | 1..394 | 1554 | 81.8 | Plus |
Dgri\GH18024-PA | 298 | GH18024-PA | 37..272 | 150..378 | 335 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6712-PA | 394 | CG6712-PA | 1..394 | 1..394 | 2050 | 100 | Plus |
CG11920-PA | 298 | CG11920-PA | 7..282 | 106..391 | 335 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14801-PA | 407 | GI14801-PA | 1..407 | 1..394 | 1502 | 82.1 | Plus |
Dmoj\GI16926-PA | 218 | GI16926-PA | 1..192 | 184..378 | 302 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14129-PA | 398 | GL14129-PA | 1..398 | 1..394 | 1546 | 83.5 | Plus |
Dper\GL21897-PA | 293 | GL21897-PA | 80..271 | 184..378 | 327 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19804-PA | 396 | GA19804-PA | 1..396 | 1..394 | 1541 | 83.7 | Plus |
Dpse\GA22540-PA | 293 | GA22540-PA | 80..271 | 184..378 | 327 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26329-PA | 392 | GM26329-PA | 1..392 | 1..394 | 1995 | 97 | Plus |
Dsec\GM17799-PA | 298 | GM17799-PA | 80..285 | 184..394 | 338 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22130-PA | 392 | GD22130-PA | 1..392 | 1..394 | 1998 | 97 | Plus |
Dsim\GD21170-PA | 298 | GD21170-PA | 80..285 | 184..394 | 337 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20668-PA | 395 | GJ20668-PA | 1..395 | 1..394 | 1552 | 82.8 | Plus |
Dvir\GJ23618-PA | 297 | GJ23618-PA | 81..272 | 184..378 | 320 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21080-PA | 392 | GK21080-PA | 1..392 | 1..394 | 1592 | 85.7 | Plus |
Dwil\GK12239-PA | 306 | GK12239-PA | 80..273 | 184..380 | 342 | 36.9 | Plus |
Dwil\GK19236-PA | 154 | GK19236-PA | 2..127 | 250..378 | 213 | 37.7 | Plus |