BDGP Sequence Production Resources |
Search the DGRC for LD23505
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 235 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | Psn-RA |
Protein status: | LD23505.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2072 |
Gene | Date | Evidence |
---|---|---|
CG18803 | 2001-01-01 | Release 2 assignment |
CG18803 | 2001-10-10 | Blastp of sequenced clone |
CG18803 | 2003-01-01 | Sim4 clustering to Release 3 |
Psn | 2008-04-29 | Release 5.5 accounting |
Psn | 2008-08-15 | Release 5.9 accounting |
Psn | 2008-12-18 | 5.12 accounting |
2072 bp (2072 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061316
> LD23505.complete AAAGGGGTTCCTTTTAGAGTCATAAAAAATTGTGAGTTGACAAAGTCGCC ACTTTTAATTTGTGCATGATTGCATGTAGAAGTTATTCTAAATACTTGTA CCTTAAATATATTAATCCCTTCGCAAATTAATCGAACATCGATAGTTCAG CCGGACGAGCGCACTGCCATCACTAGTATATGAGTCGCTTTAAAACAAAA GAAAGTTTTTACCAGCTACATTTCTTTGGTTTCCTTAACTAAATCCCATC ACACAACTACGGCTTCGCAGGGGGAGGCGTCCAGCGCTACGGAGGCGAAC GAACGCACACCACTGATGGCTGCTGTCAATCTCCAGGCTTCGTGCTCCTC CGGGCTCGCCTCTGAGGATGACGCCAATGTGGGCAGCCAGATAGGCGCGG CGGAGCGTTTGGAACGACCTCCAAGGCGGCAACAGCAGCGGAACAACTAC GGCTCCAGCAATCAGGATCAACCGGATGCTGCCATACTTGCTGTGCCCAA TGTGGTGATGCGTGAACCTTGTGGCTCGCGCCCTTCAAGACTGACCGGTG GAGGAGGCGGCAGTGGTGGTCCGCCCACAAATGAAATGGAGGAAGAGCAG GGCCTGAAATACGGGGCCCAGCATGTGATCAAGTTATTCGTCCCCGTCTC CCTTTGCATGCTGGTAGTGGTGGCTACCATCAACTCCATCAGCTTCTACA ACAGCACGGATGTCTATCTCCTCTACACACCTTTCCATGAACAATCGCCC GAGCCTAGTGTTAAGTTCTGGAGTGCCTTGGCGAACTCCCTGATCCTGAT GAGCGTGGTGGTGGTGATGACCTTTTTGCTGATTGTTTTGTACAAGAAGC GTTGCTATCGCATCATTCACGGCTGGCTGATTCTCTCCTCCTTCATGTTG TTGTTCATTTTTACGTACTTATATTTGGAAGAGCTTCTTCGCGCCTATAA CATACCGATGGACTACCCTACTGCACTACTGATTATGTGGAACTTTGGAG TGGTCGGAATGATGTCCATCCATTGGCAGGGACCTCTGCGGTTGCAGCAA GGATATCTCATTTTCGTGGCAGCCTTGATGGCCTTGGTGTTCATTAAATA CCTGCCTGAATGGACTGCCTGGGCTGTATTGGCTGCCATTTCTATTTGGG ATCTTATTGCTGTCCTTTCGCCAAGAGGACCCCTCCGCATTCTGGTGGAA ACGGCTCAGGAGCGAAATGAGCAAATCTTCCCCGCTCTGATTTATTCATC CACTGTCGTTTACGCACTTGTAAACACTGTTACGCCGCAGCAATCGCAGG CCACAGCTTCCTCCTCGCCGTCGTCCAGCAACTCCACCACAACCACGAGG GCCACGCAGAACTCGCTGGCTTCGCCAGAGGCAGCAGCGGCTAGTGGCCA ACGCACAGGTAACTCCCATCCTCGACAGAATCAGCGGGATGACGGCAGTG TACTGGCAACTGAAGGTATGCCACTTGTGACTTTTAAAAGCAATTTGCGC GGAAACGCTGAGGCTGCGGGTTTCACGCAAGAGTGGTCAGCTAACTTGAG CGAACGTGTGGCTCGTCGCCAGATTGAAGTTCAAAGTACTCAGAGTGGAA ACGCTCAGCGCTCCAACGAGTATAGGACAGTAACAGCTCCGGATCAGAAT CATCCGGATGGGCAAGAAGAACGTGGCATAAAGCTTGGCCTCGGCGACTT CATCTTCTACTCGGTATTAGTGGGCAAGGCCTCCAGCTACGGCGACTGGA CGACCACAATCGCTTGCTTTGTGGCCATCCTCATTGGACTCTGCCTCACT CTTCTGCTTCTGGCCATTTGGCGCAAGGCGCTACCCGCCCTGCCCATCTC AATAACGTTCGGATTGATATTTTGCTTCGCCACTAGTGCGGTGGTCAAGC CGTTCATGGAGGATCTATCGGCCAAGCAGGTGTTTATATAAACTTGAAAA GACAAGGACACATCAAGTGTCTTACAGTATCATAGTCTAACAAAGCTTTT TGTAATCCAATTCTTTATTTAACAAAATGCATAGTAACAACCTCGACTAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Psn-RA | 2079 | Psn-RA | 1..2050 | 1..2050 | 10250 | 100 | Plus |
Psn-RB | 2037 | Psn-RB | 1..1465 | 1..1465 | 7325 | 100 | Plus |
Psn.c | 2096 | Psn.c | 300..1524 | 241..1465 | 6125 | 100 | Plus |
Psn-RB | 2037 | Psn-RB | 1465..2008 | 1507..2050 | 2720 | 100 | Plus |
Psn.c | 2096 | Psn.c | 1524..2067 | 1507..2050 | 2720 | 100 | Plus |
Psn.c | 2096 | Psn.c | 1..240 | 1..240 | 1200 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20423790..20424165 | 1673..2048 | 1880 | 100 | Plus |
chr3L | 24539361 | chr3L | 20423088..20423350 | 1245..1507 | 1300 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 20421773..20422013 | 241..481 | 1205 | 100 | Plus |
chr3L | 24539361 | chr3L | 20421474..20421713 | 1..240 | 1200 | 100 | Plus |
chr3L | 24539361 | chr3L | 20422078..20422316 | 481..719 | 1195 | 100 | Plus |
chr3L | 24539361 | chr3L | 20422647..20422867 | 930..1150 | 1105 | 100 | Plus |
chr3L | 24539361 | chr3L | 20422384..20422593 | 720..929 | 1050 | 100 | Plus |
chr3L | 24539361 | chr3L | 20423556..20423723 | 1507..1674 | 840 | 100 | Plus |
chr3L | 24539361 | chr3L | 20422939..20423038 | 1150..1249 | 500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20434781..20435158 | 1673..2050 | 1890 | 100 | Plus |
3L | 28110227 | 3L | 20434082..20434344 | 1245..1507 | 1300 | 99.6 | Plus |
3L | 28110227 | 3L | 20432767..20433007 | 241..481 | 1205 | 100 | Plus |
3L | 28110227 | 3L | 20432468..20432707 | 1..240 | 1200 | 100 | Plus |
3L | 28110227 | 3L | 20433072..20433310 | 481..719 | 1195 | 100 | Plus |
3L | 28110227 | 3L | 20433641..20433861 | 930..1150 | 1105 | 100 | Plus |
3L | 28110227 | 3L | 20433378..20433587 | 720..929 | 1050 | 100 | Plus |
3L | 28110227 | 3L | 20434547..20434714 | 1507..1674 | 840 | 100 | Plus |
3L | 28110227 | 3L | 20433933..20434032 | 1150..1249 | 500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20427881..20428258 | 1673..2050 | 1890 | 100 | Plus |
3L | 28103327 | 3L | 20427182..20427444 | 1245..1507 | 1300 | 99.6 | Plus |
3L | 28103327 | 3L | 20425867..20426107 | 241..481 | 1205 | 100 | Plus |
3L | 28103327 | 3L | 20425568..20425807 | 1..240 | 1200 | 100 | Plus |
3L | 28103327 | 3L | 20426172..20426410 | 481..719 | 1195 | 100 | Plus |
3L | 28103327 | 3L | 20426741..20426961 | 930..1150 | 1105 | 100 | Plus |
3L | 28103327 | 3L | 20426478..20426687 | 720..929 | 1050 | 100 | Plus |
3L | 28103327 | 3L | 20427647..20427814 | 1507..1674 | 840 | 100 | Plus |
3L | 28103327 | 3L | 20427033..20427132 | 1150..1249 | 500 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20421474..20421713 | 1..240 | 100 | -> | Plus |
chr3L | 20421773..20422012 | 241..480 | 100 | -> | Plus |
chr3L | 20422078..20422316 | 481..719 | 100 | -> | Plus |
chr3L | 20422384..20422593 | 720..929 | 100 | -> | Plus |
chr3L | 20422647..20422867 | 930..1150 | 100 | -> | Plus |
chr3L | 20422940..20423038 | 1151..1249 | 100 | -> | Plus |
chr3L | 20423093..20423350 | 1250..1507 | 100 | -> | Plus |
chr3L | 20423557..20423721 | 1508..1672 | 100 | -> | Plus |
chr3L | 20423790..20424165 | 1673..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psn-RA | 1..1626 | 316..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psn-RA | 1..1626 | 316..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psn-RA | 1..1626 | 316..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psn-RA | 1..1626 | 316..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psn-RA | 1..1626 | 316..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psn-RA | 1..2048 | 1..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psn-RA | 1..2048 | 1..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psn-RA | 1..2048 | 1..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psn-RA | 1..2048 | 1..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Psn-RA | 1..2048 | 1..2048 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20434087..20434344 | 1250..1507 | 100 | -> | Plus |
3L | 20434781..20435156 | 1673..2048 | 100 | Plus | |
3L | 20434548..20434712 | 1508..1672 | 100 | -> | Plus |
3L | 20432468..20432707 | 1..240 | 100 | -> | Plus |
3L | 20432767..20433006 | 241..480 | 100 | -> | Plus |
3L | 20433072..20433310 | 481..719 | 100 | -> | Plus |
3L | 20433378..20433587 | 720..929 | 100 | -> | Plus |
3L | 20433641..20433861 | 930..1150 | 100 | -> | Plus |
3L | 20433934..20434032 | 1151..1249 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20434087..20434344 | 1250..1507 | 100 | -> | Plus |
3L | 20434781..20435156 | 1673..2048 | 100 | Plus | |
3L | 20434548..20434712 | 1508..1672 | 100 | -> | Plus |
3L | 20432468..20432707 | 1..240 | 100 | -> | Plus |
3L | 20432767..20433006 | 241..480 | 100 | -> | Plus |
3L | 20433072..20433310 | 481..719 | 100 | -> | Plus |
3L | 20433378..20433587 | 720..929 | 100 | -> | Plus |
3L | 20433641..20433861 | 930..1150 | 100 | -> | Plus |
3L | 20433934..20434032 | 1151..1249 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20434087..20434344 | 1250..1507 | 100 | -> | Plus |
3L | 20434781..20435156 | 1673..2048 | 100 | Plus | |
3L | 20434548..20434712 | 1508..1672 | 100 | -> | Plus |
3L | 20432468..20432707 | 1..240 | 100 | -> | Plus |
3L | 20432767..20433006 | 241..480 | 100 | -> | Plus |
3L | 20433072..20433310 | 481..719 | 100 | -> | Plus |
3L | 20433378..20433587 | 720..929 | 100 | -> | Plus |
3L | 20433641..20433861 | 930..1150 | 100 | -> | Plus |
3L | 20433934..20434032 | 1151..1249 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20427187..20427444 | 1250..1507 | 100 | -> | Plus |
arm_3L | 20427648..20427812 | 1508..1672 | 100 | -> | Plus |
arm_3L | 20427881..20428256 | 1673..2048 | 100 | Plus | |
arm_3L | 20425568..20425807 | 1..240 | 100 | -> | Plus |
arm_3L | 20425867..20426106 | 241..480 | 100 | -> | Plus |
arm_3L | 20426172..20426410 | 481..719 | 100 | -> | Plus |
arm_3L | 20426478..20426687 | 720..929 | 100 | -> | Plus |
arm_3L | 20426741..20426961 | 930..1150 | 100 | -> | Plus |
arm_3L | 20427034..20427132 | 1151..1249 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20427881..20428256 | 1673..2048 | 100 | Plus | |
3L | 20425568..20425807 | 1..240 | 100 | -> | Plus |
3L | 20425867..20426106 | 241..480 | 100 | -> | Plus |
3L | 20426172..20426410 | 481..719 | 100 | -> | Plus |
3L | 20426478..20426687 | 720..929 | 100 | -> | Plus |
3L | 20426741..20426961 | 930..1150 | 100 | -> | Plus |
3L | 20427034..20427132 | 1151..1249 | 100 | -> | Plus |
3L | 20427187..20427444 | 1250..1507 | 100 | -> | Plus |
3L | 20427648..20427812 | 1508..1672 | 100 | -> | Plus |
Translation from 315 to 1940
> LD23505.pep MAAVNLQASCSSGLASEDDANVGSQIGAAERLERPPRRQQQRNNYGSSNQ DQPDAAILAVPNVVMREPCGSRPSRLTGGGGGSGGPPTNEMEEEQGLKYG AQHVIKLFVPVSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVK FWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHGWLILSSFMLLFIFT YLYLEELLRAYNIPMDYPTALLIMWNFGVVGMMSIHWQGPLRLQQGYLIF VAALMALVFIKYLPEWTAWAVLAAISIWDLIAVLSPRGPLRILVETAQER NEQIFPALIYSSTVVYALVNTVTPQQSQATASSSPSSSNSTTTTRATQNS LASPEAAAASGQRTGNSHPRQNQRDDGSVLATEGMPLVTFKSNLRGNAEA AGFTQEWSANLSERVARRQIEVQSTQSGNAQRSNEYRTVTAPDQNHPDGQ EERGIKLGLGDFIFYSVLVGKASSYGDWTTTIACFVAILIGLCLTLLLLA IWRKALPALPISITFGLIFCFATSAVVKPFMEDLSAKQVFI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10339-PA | 531 | GF10339-PA | 2..531 | 3..541 | 2172 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16113-PA | 522 | GG16113-PA | 1..522 | 1..541 | 2668 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14546-PA | 536 | GH14546-PA | 6..536 | 15..541 | 1994 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Psn-PE | 541 | CG18803-PE | 1..541 | 1..541 | 2765 | 100 | Plus |
Psn-PA | 541 | CG18803-PA | 1..541 | 1..541 | 2765 | 100 | Plus |
Psn-PD | 527 | CG18803-PD | 1..527 | 1..541 | 2667 | 97.4 | Plus |
Psn-PB | 527 | CG18803-PB | 1..527 | 1..541 | 2667 | 97.4 | Plus |
Psn-PC | 508 | CG18803-PC | 1..508 | 1..541 | 2547 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13394-PA | 546 | GI13394-PA | 25..546 | 27..541 | 1866 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12786-PA | 531 | GL12786-PA | 24..531 | 27..541 | 2032 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15086-PA | 531 | GA15086-PA | 24..531 | 27..541 | 2032 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22291-PA | 527 | GM22291-PA | 1..527 | 1..541 | 2760 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14885-PA | 527 | GD14885-PA | 1..527 | 1..541 | 2754 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11519-PA | 532 | GJ11519-PA | 22..532 | 25..541 | 1894 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12343-PA | 541 | GK12343-PA | 24..541 | 22..541 | 1888 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23235-PA | 524 | GE23235-PA | 1..524 | 1..541 | 2666 | 94.6 | Plus |
Translation from 315 to 1940
> LD23505.hyp MAAVNLQASCSSGLASEDDANVGSQIGAAERLERPPRRQQQRNNYGSSNQ DQPDAAILAVPNVVMREPCGSRPSRLTGGGGGSGGPPTNEMEEEQGLKYG AQHVIKLFVPVSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVK FWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHGWLILSSFMLLFIFT YLYLEELLRAYNIPMDYPTALLIMWNFGVVGMMSIHWQGPLRLQQGYLIF VAALMALVFIKYLPEWTAWAVLAAISIWDLIAVLSPRGPLRILVETAQER NEQIFPALIYSSTVVYALVNTVTPQQSQATASSSPSSSNSTTTTRATQNS LASPEAAAASGQRTGNSHPRQNQRDDGSVLATEGMPLVTFKSNLRGNAEA AGFTQEWSANLSERVARRQIEVQSTQSGNAQRSNEYRTVTAPDQNHPDGQ EERGIKLGLGDFIFYSVLVGKASSYGDWTTTIACFVAILIGLCLTLLLLA IWRKALPALPISITFGLIFCFATSAVVKPFMEDLSAKQVFI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Psn-PE | 541 | CG18803-PE | 1..541 | 1..541 | 2765 | 100 | Plus |
Psn-PA | 541 | CG18803-PA | 1..541 | 1..541 | 2765 | 100 | Plus |
Psn-PD | 527 | CG18803-PD | 1..527 | 1..541 | 2667 | 97.4 | Plus |
Psn-PB | 527 | CG18803-PB | 1..527 | 1..541 | 2667 | 97.4 | Plus |
Psn-PC | 508 | CG18803-PC | 1..508 | 1..541 | 2547 | 93.9 | Plus |