BDGP Sequence Production Resources |
Search the DGRC for LD23509
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 235 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | Aats-lys-RA |
Protein status: | LD23509.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1896 |
Gene | Date | Evidence |
---|---|---|
CG12141 | 2001-01-01 | Release 2 assignment |
CG12141 | 2001-10-10 | Blastp of sequenced clone |
CG12141 | 2003-01-01 | Sim4 clustering to Release 3 |
Aats-lys | 2008-04-29 | Release 5.5 accounting |
Aats-lys | 2008-08-15 | Release 5.9 accounting |
Aats-lys | 2008-12-18 | 5.12 accounting |
1896 bp (1896 high quality bases) assembled on 2001-10-10
GenBank Submission: AY089547
> LD23509.complete CTTCTGAGACCCCGGGATTAAACAGCGAACAACGTAACCGCATCAGCATG GCCGCTGCAAGTGGAGAACTGTCCAAGAATGAGCTAAAGCGTCGCCTGAA GGCCGAGCAAAAGGCCAAGGAGAAGGCTGAGAAGGCGGCCGCTGCGCCGG CGGAAAATACTGCTGGCAAGAAGAAGAGCAGTGCCGCCGAGGAGGAGGAG ATCTCGCCGAATGAATACTTTAAGCTGCGCTCCGCCGCCGTTCAGGAGCT GAAACGTTCACCCGCAACGGATCCCTATCCACACAAGTTCCATGTGAGTA GCTCGCTGGAAGACTTCATTGCCAAGTACGAGAACAGCCTCAAGGAGGGC GAGACCCTGGAGAATGTCAAACTGAGCGTGGCTGGGCGCGTGCATGCCAT ACGCGAGTCGGGCGCCAAGCTCATTTTCTACGATCTGCGCGGCGAGGGCG TCAAGGTGCAGGTGATGGCCAGCGCTAAGTCCTACAAGTCGGAGGCGGAT TTCGAAATCGATACGTCCAAATTGCGACGTGGTGATATCATCGGCGTTGT CGGACATCCCGGCAAAACCAAGAAGGGTGAACTGTCCGTTATGCCCAGCG AGATCAAGCTGCTATCGCCCTGTCTACACATGCTGCCCCATCTGCATTTC GGGTTGAAGGACAAGGAGACGCGCTACCGCCAGCGCTATCTTGATCTCAT TCTCAACAACAATGTGCGAGAGAAATTCCAGATCCGTGCCAAGATCATCT CGTACGTGCGTCAGTTCCTGGATCGTCTGGGTTTCCTGGAGATCGAGACG CCCATGATGAACATGATCGCCGGTGGAGCCACTGCCAAGCCCTTCGTGAC GCATCACAATGACCTCAAGATGGATCTGTTCATGCGCATTGCTCCGGAGC TGTATCACAAGATGCTGGTGGTGGGTGGACTCGATCGTGTGTACGAGATC GGACGGCAGTTCCGCAACGAGGGCATCGACCTCACCCACAATCCTGAATT CACCACGTGCGAGTTCTACATGGCGTATGCCGACTACGCTGACATTATGG ATATCACCGAGCAGTTGGTCTCGGGAATGGTGAAAGCGATCCGTGGCTCC TACAAGGTCATCTATCATCCGGAGGGTCCAGAGGGACCTGAGCAAGAACT TGACTTTACGCCGCCCTTTAAGCGCGTATCCATGATCAAAACGCTGGAAG AGAAGCTGCAGGTGAAGTTCCCCGCGGCCGACACCTTCAATTCGCCAGAG ACGAATCAGTTCCTGTCTCAGCTGTGCGCTAAGCACCAGGTCGAGTGCCC AGCTCCGCGCACCACTGCCCGCCTGCTGGACAAGCTCGTCGGCGAATTCA TCGAGGAGTTTTGCGTGAATCCAACGTTCATCTGTGAGCATCCGCAGATC ATGTCGCCGCTGGCCAAGTACCATCGCAGTATTCCCGGCCTGACGGAGCG CTTCGAACTGTTTGTGGCCAAGAAGGAGATTTGCAACGCGTATACCGAGT TGAACGATCCGGTTGTGCAGCGCGAGCGTTTCGAGCAGCAGGCCAGCGAC AAGGCGGCCGGCGATGATGAGGCCCAGCTGGTCGACGAGAACTTCTGCAC GTCCCTGGAGTACGGACTGCCGCCCACCGGTGGTTTTGGCATGGGCATCG ATCGCCTGGCCATGTTCCTCACGGACTCCAACAACATCAAGGAGGTTCTG CTGTTCCCCGCCATGAAACCGGAGGATGCCAACCGCACGGCAGCGGAAAC TGCTCCCACCGCACAGCAGTAGATGGCCAACGCCGCTCACTCCACTCAGA CCCAATCCTTGTACGTTACGCTGGTCCCGGACTAATCCCAGTTGCTAAGT TATTCAACCAATAAACATTTTTCCCAATAACCAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Aats-lys-RA | 2095 | Aats-lys-RA | 88..1972 | 1..1885 | 9425 | 100 | Plus |
Aats-lys.a | 2287 | Aats-lys.a | 369..2174 | 80..1885 | 9030 | 100 | Plus |
Aats-lys-RB | 2143 | Aats-lys-RB | 225..2030 | 80..1885 | 9030 | 100 | Plus |
Aats-lys.a | 2287 | Aats-lys.a | 56..134 | 1..79 | 395 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9498327..9499284 | 1699..742 | 4760 | 99.8 | Minus |
chrX | 22417052 | chrX | 9499344..9500007 | 743..80 | 3320 | 100 | Minus |
chrX | 22417052 | chrX | 9498078..9498270 | 1882..1690 | 965 | 100 | Minus |
chrX | 22417052 | chrX | 9500434..9500512 | 79..1 | 395 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 9606612..9607569 | 1699..742 | 4760 | 99.8 | Minus |
X | 23542271 | X | 9607629..9608292 | 743..80 | 3320 | 100 | Minus |
X | 23542271 | X | 9606360..9606555 | 1885..1690 | 980 | 100 | Minus |
X | 23542271 | X | 9608719..9608797 | 79..1 | 395 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 9614710..9615667 | 1699..742 | 4760 | 99.7 | Minus |
X | 23527363 | X | 9615727..9616390 | 743..80 | 3320 | 100 | Minus |
X | 23527363 | X | 9614458..9614653 | 1885..1690 | 980 | 100 | Minus |
X | 23527363 | X | 9616817..9616895 | 79..1 | 395 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 7727..7764 | 1472..1509 | 118 | 78.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9498078..9498268 | 1692..1882 | 100 | <- | Minus |
chrX | 9498335..9499282 | 744..1691 | 100 | <- | Minus |
chrX | 9499344..9500007 | 80..743 | 100 | <- | Minus |
chrX | 9500434..9500512 | 1..79 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RA | 1..1725 | 48..1772 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RA | 1..1725 | 48..1772 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RA | 1..1725 | 48..1772 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RA | 1..1725 | 48..1772 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RA | 1..1725 | 48..1772 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RA | 88..1969 | 1..1882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RA | 88..1969 | 1..1882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RA | 88..1969 | 1..1882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RA | 88..1969 | 1..1882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-lys-RA | 88..1969 | 1..1882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9606620..9607567 | 744..1691 | 100 | <- | Minus |
X | 9606363..9606553 | 1692..1882 | 100 | <- | Minus |
X | 9607629..9608292 | 80..743 | 100 | <- | Minus |
X | 9608719..9608797 | 1..79 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9606620..9607567 | 744..1691 | 100 | <- | Minus |
X | 9606363..9606553 | 1692..1882 | 100 | <- | Minus |
X | 9607629..9608292 | 80..743 | 100 | <- | Minus |
X | 9608719..9608797 | 1..79 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9606620..9607567 | 744..1691 | 100 | <- | Minus |
X | 9606363..9606553 | 1692..1882 | 100 | <- | Minus |
X | 9607629..9608292 | 80..743 | 100 | <- | Minus |
X | 9608719..9608797 | 1..79 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9500653..9501600 | 744..1691 | 100 | <- | Minus |
arm_X | 9500396..9500586 | 1692..1882 | 100 | <- | Minus |
arm_X | 9501662..9502325 | 80..743 | 100 | <- | Minus |
arm_X | 9502752..9502830 | 1..79 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9614718..9615665 | 744..1691 | 100 | <- | Minus |
X | 9615727..9616390 | 80..743 | 100 | <- | Minus |
X | 9616817..9616895 | 1..79 | 100 | Minus | |
X | 9614461..9614651 | 1692..1882 | 100 | <- | Minus |
Translation from 2 to 1771
> LD23509.hyp SETPGLNSEQRNRISMAAASGELSKNELKRRLKAEQKAKEKAEKAAAAPA ENTAGKKKSSAAEEEEISPNEYFKLRSAAVQELKRSPATDPYPHKFHVSS SLEDFIAKYENSLKEGETLENVKLSVAGRVHAIRESGAKLIFYDLRGEGV KVQVMASAKSYKSEADFEIDTSKLRRGDIIGVVGHPGKTKKGELSVMPSE IKLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNNNVREKFQIRAKIIS YVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDLFMRIAPEL YHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYADIMD ITEQLVSGMVKAIRGSYKVIYHPEGPEGPEQELDFTPPFKRVSMIKTLEE KLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLDKLVGEFI EEFCVNPTFICEHPQIMSPLAKYHRSIPGLTERFELFVAKKEICNAYTEL NDPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGID RLAMFLTDSNNIKEVLLFPAMKPEDANRTAAETAPTAQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Aats-lys-PA | 574 | CG12141-PA | 1..574 | 16..589 | 2963 | 100 | Plus |
Aats-lys-PC | 607 | CG12141-PC | 42..607 | 24..589 | 2915 | 99.6 | Plus |
Aats-lys-PB | 607 | CG12141-PB | 42..607 | 24..589 | 2915 | 99.6 | Plus |
CG31739-PC | 1082 | CG31739-PC | 337..654 | 21..354 | 196 | 23.5 | Plus |
CG31739-PB | 1082 | CG31739-PB | 337..654 | 21..354 | 196 | 23.5 | Plus |
Translation from 47 to 1771
> LD23509.pep MAAASGELSKNELKRRLKAEQKAKEKAEKAAAAPAENTAGKKKSSAAEEE EISPNEYFKLRSAAVQELKRSPATDPYPHKFHVSSSLEDFIAKYENSLKE GETLENVKLSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEA DFEIDTSKLRRGDIIGVVGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLH FGLKDKETRYRQRYLDLILNNNVREKFQIRAKIISYVRQFLDRLGFLEIE TPMMNMIAGGATAKPFVTHHNDLKMDLFMRIAPELYHKMLVVGGLDRVYE IGRQFRNEGIDLTHNPEFTTCEFYMAYADYADIMDITEQLVSGMVKAIRG SYKVIYHPEGPEGPEQELDFTPPFKRVSMIKTLEEKLQVKFPAADTFNSP ETNQFLSQLCAKHQVECPAPRTTARLLDKLVGEFIEEFCVNPTFICEHPQ IMSPLAKYHRSIPGLTERFELFVAKKEICNAYTELNDPVVQRERFEQQAS DKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEV LLFPAMKPEDANRTAAETAPTAQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22422-PA | 580 | GF22422-PA | 1..580 | 1..574 | 2718 | 90.7 | Plus |
Dana\GF15370-PA | 1132 | GF15370-PA | 501..722 | 127..341 | 202 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18967-PA | 574 | GG18967-PA | 1..574 | 1..574 | 3010 | 97.7 | Plus |
Dere\GG22777-PA | 1145 | GG22777-PA | 546..715 | 173..341 | 191 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17710-PA | 582 | GH17710-PA | 1..580 | 1..574 | 2707 | 85.7 | Plus |
Dgri\GH21379-PA | 533 | GH21379-PA | 91..525 | 109..554 | 198 | 23.2 | Plus |
Dgri\GH13102-PA | 1125 | GH13102-PA | 498..667 | 173..341 | 182 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
LysRS-PA | 574 | CG12141-PA | 1..574 | 1..574 | 2963 | 100 | Plus |
LysRS-PC | 607 | CG12141-PC | 42..607 | 9..574 | 2915 | 99.6 | Plus |
LysRS-PB | 607 | CG12141-PB | 42..607 | 9..574 | 2915 | 99.6 | Plus |
AspRS-m-PC | 1082 | CG31739-PC | 337..654 | 6..339 | 196 | 23.5 | Plus |
AspRS-m-PB | 1082 | CG31739-PB | 337..654 | 6..339 | 196 | 23.5 | Plus |
AspRS-m-PA | 1082 | CG31739-PA | 337..654 | 6..339 | 196 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15452-PA | 554 | GI15452-PA | 1..550 | 1..548 | 2510 | 86.9 | Plus |
Dmoj\GI14195-PA | 1190 | GI14195-PA | 561..756 | 173..385 | 185 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27002-PA | 518 | GL27002-PA | 170..500 | 233..563 | 1724 | 92.4 | Plus |
Dper\GL27002-PA | 518 | GL27002-PA | 1..173 | 1..170 | 605 | 73 | Plus |
Dper\GL18794-PA | 1091 | GL18794-PA | 436..683 | 127..385 | 184 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11433-PA | 584 | GA11433-PA | 1..566 | 1..563 | 2663 | 87.5 | Plus |
Dpse\GA16436-PA | 1106 | GA16436-PA | 451..698 | 127..385 | 185 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11355-PA | 574 | GM11355-PA | 1..574 | 1..574 | 3031 | 98.4 | Plus |
Dsec\GM17213-PA | 1088 | GM17213-PA | 493..714 | 127..341 | 201 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16054-PA | 610 | GD16054-PA | 45..610 | 9..574 | 2983 | 98.1 | Plus |
Dsim\GD24088-PA | 887 | GD24088-PA | 493..714 | 127..341 | 199 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19167-PA | 580 | GJ19167-PA | 1..576 | 1..574 | 2635 | 86.2 | Plus |
Dvir\GJ17510-PA | 1132 | GJ17510-PA | 443..689 | 125..385 | 187 | 24.5 | Plus |