BDGP Sequence Production Resources |
Search the DGRC for LD23532
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 235 |
Well: | 32 |
Vector: | pOT2 |
Associated Gene/Transcript | CG16817-RA |
Protein status: | LD23532.pep: gold |
Preliminary Size: | 1085 |
Sequenced Size: | 806 |
Gene | Date | Evidence |
---|---|---|
CG16817 | 2001-01-01 | Release 2 assignment |
CG16817 | 2001-10-10 | Blastp of sequenced clone |
CG16817 | 2003-01-01 | Sim4 clustering to Release 3 |
CG16817 | 2008-04-29 | Release 5.5 accounting |
CG16817 | 2008-08-15 | Release 5.9 accounting |
CG16817 | 2008-12-18 | 5.12 accounting |
806 bp (806 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061317
> LD23532.complete TCAATTTTGTGCATGACAATTTTGTTCAACAGAAACTGCCTTTTTTTGTA ACCAAGTCAGGCTGTCAGTCAGAAGTGTTCCGACTTCGTAAAACATAAAC CAACAATTCACAGCAACAACATAATGTCGGCAGCAGCAGGCTTGATTCCG CCTCCAGTTTCCTGGGCCCAGCGCAATGACTTGATCTACGTCATCATCGA TGTCGAATGCAAGGACATCGAACACAAAGTTACGGAAAAAACCTTCACCT TCAAGGGCGTAAACGTGCTGGATCCGTCGAAGAAGTACGAGGTCACACTG AACTTCCTCCACGAGGTGGATCCCGAGAAGGTGACCAGCAAGAACATTGG CCGCTGCCTGGAATTCACAATACCCAAGAAGGCGGCCGGTCCCTACTGGT CCTCGCTGACCACGGACAAGACCAAGTTGCATTTCCTAAAAGCCAACTTT GCCAAGTGGCGCGATGAGTCCGACGACGAGGAGGGTGACCAAAAAGACAA CAGCATGTTTGGAAATTTCCTTAACAGCCCTGGTGGCGATTGGAACAACA AGTTCGACGATTTCAACGTCGATGACGAGGAGGAGGACTCGGATGACAAC ATCCCAAGTCTGTCCCAGAACGACGAGGATGACGAGGAGGGCGGCGAGGG TGATAAGGAGAAGAAGCCAGCTGCCTAGACGGTCGCTCAGATGGTGTCTC GCAATTTGGCGTAGTCGTAGCGTTAGGCGTGGCTCTTATACCATAAGTCA GCACACGATCACAACACTCACTCCTCACATACACACCAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16817-RA | 1189 | CG16817-RA | 84..889 | 1..806 | 3970 | 99.5 | Plus |
CG16817.c | 1233 | CG16817.c | 351..933 | 224..806 | 2840 | 99.1 | Plus |
CG16817.a | 1161 | CG16817.a | 286..864 | 228..806 | 2835 | 99.3 | Plus |
CG16817.c | 1233 | CG16817.c | 57..283 | 1..227 | 1135 | 100 | Plus |
CG16817.a | 1161 | CG16817.a | 43..269 | 1..227 | 1135 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5504871..5505174 | 484..787 | 1520 | 100 | Plus |
chr3R | 27901430 | chr3R | 5504545..5504807 | 224..486 | 1300 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 5503776..5503915 | 1..140 | 700 | 100 | Plus |
chr3R | 27901430 | chr3R | 5504390..5504477 | 140..227 | 440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9679042..9679364 | 484..806 | 1555 | 98.8 | Plus |
3R | 32079331 | 3R | 9678716..9678978 | 224..486 | 1300 | 99.6 | Plus |
3R | 32079331 | 3R | 9677947..9678086 | 1..140 | 700 | 100 | Plus |
3R | 32079331 | 3R | 9678561..9678648 | 140..227 | 440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9419873..9420195 | 484..806 | 1555 | 98.7 | Plus |
3R | 31820162 | 3R | 9419547..9419809 | 224..486 | 1300 | 99.6 | Plus |
3R | 31820162 | 3R | 9418778..9418917 | 1..140 | 700 | 100 | Plus |
3R | 31820162 | 3R | 9419392..9419479 | 140..227 | 440 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5504872..5505174 | 485..787 | 100 | Plus | |
chr3R | 5503776..5503915 | 1..140 | 100 | -> | Plus |
chr3R | 5504391..5504477 | 141..227 | 100 | -> | Plus |
chr3R | 5504549..5504805 | 228..484 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16817-RA | 1..555 | 124..678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16817-RA | 1..555 | 124..678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16817-RA | 1..555 | 124..678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16817-RA | 1..555 | 124..678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16817-RA | 1..555 | 124..678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16817-RA | 17..803 | 1..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16817-RA | 43..829 | 1..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16817-RA | 21..807 | 1..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16817-RA | 17..803 | 1..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16817-RA | 21..807 | 1..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9677947..9678086 | 1..140 | 100 | -> | Plus |
3R | 9678562..9678648 | 141..227 | 100 | -> | Plus |
3R | 9678720..9678976 | 228..484 | 100 | -> | Plus |
3R | 9679043..9679345 | 485..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9677947..9678086 | 1..140 | 100 | -> | Plus |
3R | 9678562..9678648 | 141..227 | 100 | -> | Plus |
3R | 9678720..9678976 | 228..484 | 100 | -> | Plus |
3R | 9679043..9679345 | 485..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9677947..9678086 | 1..140 | 100 | -> | Plus |
3R | 9678562..9678648 | 141..227 | 100 | -> | Plus |
3R | 9678720..9678976 | 228..484 | 100 | -> | Plus |
3R | 9679043..9679345 | 485..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5504284..5504370 | 141..227 | 100 | -> | Plus |
arm_3R | 5503669..5503808 | 1..140 | 100 | -> | Plus |
arm_3R | 5504442..5504698 | 228..484 | 100 | -> | Plus |
arm_3R | 5504765..5505067 | 485..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9419551..9419807 | 228..484 | 100 | -> | Plus |
3R | 9419874..9420176 | 485..787 | 100 | Plus | |
3R | 9418778..9418917 | 1..140 | 100 | -> | Plus |
3R | 9419393..9419479 | 141..227 | 100 | -> | Plus |
Translation from 123 to 677
> LD23532.pep MSAAAGLIPPPVSWAQRNDLIYVIIDVECKDIEHKVTEKTFTFKGVNVLD PSKKYEVTLNFLHEVDPEKVTSKNIGRCLEFTIPKKAAGPYWSSLTTDKT KLHFLKANFAKWRDESDDEEGDQKDNSMFGNFLNSPGGDWNNKFDDFNVD DEEEDSDDNIPSLSQNDEDDEEGGEGDKEKKPAA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23063-PA | 182 | GF23063-PA | 2..182 | 3..184 | 801 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17015-PA | 184 | GG17015-PA | 1..184 | 1..184 | 937 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19405-PA | 182 | GH19405-PA | 1..182 | 1..184 | 649 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
p23-PB | 184 | CG16817-PB | 1..184 | 1..184 | 993 | 100 | Plus |
p23-PA | 184 | CG16817-PA | 1..184 | 1..184 | 993 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22609-PA | 185 | GI22609-PA | 4..168 | 1..166 | 678 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12369-PA | 183 | GL12369-PA | 1..183 | 1..184 | 747 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14165-PA | 183 | GA14165-PA | 1..183 | 1..184 | 747 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23826-PA | 184 | GM23826-PA | 1..184 | 1..184 | 948 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18637-PA | 195 | GD18637-PA | 18..195 | 7..184 | 923 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23854-PA | 181 | GJ23854-PA | 2..181 | 3..184 | 682 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11119-PA | 186 | GK11119-PA | 2..186 | 3..184 | 675 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25973-PA | 184 | GE25973-PA | 1..184 | 1..184 | 934 | 96.7 | Plus |
Translation from 123 to 677
> LD23532.hyp MSAAAGLIPPPVSWAQRNDLIYVIIDVECKDIEHKVTEKTFTFKGVNVLD PSKKYEVTLNFLHEVDPEKVTSKNIGRCLEFTIPKKAAGPYWSSLTTDKT KLHFLKANFAKWRDESDDEEGDQKDNSMFGNFLNSPGGDWNNKFDDFNVD DEEEDSDDNIPSLSQNDEDDEEGGEGDKEKKPAA*