BDGP Sequence Production Resources |
Search the DGRC for LD23562
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 235 |
Well: | 62 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11417-RA |
Protein status: | LD23562.pep: gold |
Preliminary Size: | 2719 |
Sequenced Size: | 2440 |
Gene | Date | Evidence |
---|---|---|
CG11417 | 2002-06-12 | Blastp of sequenced clone |
CG11417 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11417 | 2008-04-29 | Release 5.5 accounting |
CG11417 | 2008-08-15 | Release 5.9 accounting |
CG11417 | 2008-12-18 | 5.12 accounting |
2440 bp (2440 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122162
> LD23562.complete ACGTGCTTACGTTTTGTTTGTATTTTACTGGGCTCCTCGGGAAATGGGCA AGAAGAAGGACAAGTCCGGGAAGCTGGACAAGCAGACGACGAAGAAGGAG GCACCGAGCTCGTCGCAGGCCAACATGGGGAAGGCAGCTGGAGCCAATGA TTCGGAGAACGGAATTTGGCAGGACTCTCGGTTCCAGCACCTGCTGACCG ATCCCCGATTTCGCGGCGTTCCAAAAGTGCAGCGAAAGGTCAAGATCGAC AAGCGTTTCCAGGGCATGTTCACGGACGACAAGTTCAAGGTGAAGTACAC CGTGGACAAGTACGGCCGCCCGGTCAACAAGAGCAACGCCGAGGACCTCA GAAAGTTCTACGAACTGGACGAGAACGAGAGCAGCAGCGGCGAGGAGCCT GCCAAAAAGGAATCCGATCTTGACTCCGAGGCGGAGGCAGAGCAACAAGA GCGGCGCGCCGAGGAGCGAGCCATAGCCAACTTGGAGAAGGAGGAGAGCA ACGATACTCTGGAAAGCGATAGTTCCGAGGTGTCACAGAGTCTTCGTCAG CGCCTGACCAACCCAGAGATAGACTACGCCCGCGGAGAAGGCCGCCTGTA TACCGACTCCTCCTCAGACGAGGACAGCGATGATGAGGACGAGGGTCCAG AACTGCAGATAGACCACGTGTGGGGCGAACTGGACAACGATGCCGAGCAC ACCGAGGAGAGCACCCGCCGGCTGGCTGTTTGCAACATGGACTGGGACCG CATCCGGGCCGAGGATCTAATGGTCATGCTCAGCTCCTTCCTGCCGCCCG GCGGTAGCATTCTCAGCGTCAAGATATACCCCTCAGAGTTCGGGAAAGCG CGCATGGCCGAGGAGGAAGTGCACGGCCCAAAGGAACTGGTGGAGCGCGT GGAGCCAGAAGACGACTCCGATGAGGAGCTCGTACGCCAGCAGGACAGCG ATGCCGAAGAGGGGGAGGACTACCACATGGAGAAGCTGCGTCAGTACCAG CTAAACCGACTTCGCTACTACTATGCTGTTGTCGAGTGCGACAGCATAGA CACGGCCGACAAGGTATACAAGGAGTGCGATGGTATCGAGTACGAGAGCT CCGCCACGCGCGTGGACTTGCGCTTCATCCCGGACGACACCTCGTTCGAG GAGGACACGCCGTCGGACGAATGCTTCGAGCTGCCGGATGCCAGCAGCTA TAAGCCGCGACAGTTCACCACCACGGCGTTGCAGCAGGCCAAGGTGGATC TAACCTGGGACGAGACGGCGCTGGACCGTCGTGAGCTGGGTGACAAGCTC TCCAGCGGGCAGGTTGACAAGCTCACGGACAAGGAGCTGCGCCAGATAGT AGCGTACAGTAGTGAGGAAGAGGATTCTGAGGCAGAGGAATCCCCGGCGG AGGAGGCTGCTCAAAAGGCGGTTTCAGAGGACCCACAGAAGAGCAAGCCC AAAAAGACTTCTAAGCAGGAACGCATTGCCACCTACAAAAACTTGCTGGC CGACATCCTGGAGCAGGAAAAGAAGGAGAAGGAGCAGAAGTACGAAATGG AAATGACCTGGAACGTGGAGCCCCAGCACGAAGAGGCACAGCCGGAGCAG CAAGCCCAGGCCGAGCTCACGCCCATCGAGAAGGTGATCCAGAAACGCAG CGAGAAGAACAGGCAGCGCAAGGAACAGCGCCGCCAGCGCCAGATCGAAG CCAGAGGAGGCGATGCCGGTGAGGACAGCGATGAGTCCATGGTGCCCGAT GGCATCGATTTGAATGACGCCTATTTCGCCGAGGAGTTCGCTAATGGAGA CTACGCTCCCCCTAAAACGAAGCAGGACAAGAAGAAAAAGAAAAAGAAGG GAAAGGACGATGGAGAGGAGGACGTCGAGGCGAAGCGGCAAGAGAAGGAG CTTGAGCTACTGCTGGACGATGGCGACGGGCGCGACGAGAAGCAACACTT CAGTCTGACCAAAATCCTCAAGAAGGAGGAGCAAGAAGCGAGCGGTTCAA AGCGAAAGCGTCGTCAGAAGTTAAAGAAATCGAAAAATCAGCCGCAGAAT GCGGAGAAGCTGGACGACGACTTCCAGGTAAACCTGAATGATAATCGCTT CAGTGCCGTTTACAAGTCGCACGAGTACAACATCGATCCCACCCACTCCC ATTACAAGCCCACCAAGGGCATGCAGCAGATCATCGGCGAGAAGTTAAAG CGCAGAAAGGAGCAGGGGGAGGGCGGCGCTGCAAACGGCGATGCGGATGG GGATGAGCAGGTAGCCCCCAAGAGGAGTAAGCAGCAGCTGGAGCAGAACG CCCTGGTAAAGAGTCTGAAGCGTAAGATCCAGCTGCAGCAGCAGGGCCAG AAGCTTTAGAGGATTAATGTTACTGTACAATAGGTGAACAAATGTAAATT AAAGACTACGTTAATGACATTGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11417-RA | 2438 | CG11417-RA | 10..2432 | 1..2423 | 12100 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1247985..1250406 | 1..2422 | 12095 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 1354052..1356474 | 1..2423 | 12100 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 1362150..1364572 | 1..2423 | 12100 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1247985..1249802 | 1..1818 | 99 | == | Plus |
chrX | 1249885..1250406 | 1901..2422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11417-RA | 1..2316 | 44..2359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11417-RA | 1..2316 | 44..2359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11417-RA | 1..2316 | 44..2359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11417-RA | 1..2316 | 44..2359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11417-RA | 1..2316 | 44..2359 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11417-RA | 10..2431 | 1..2422 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11417-RA | 10..2431 | 1..2422 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11417-RA | 39..2460 | 1..2422 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11417-RA | 10..2431 | 1..2422 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11417-RA | 39..2460 | 1..2422 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1354052..1356473 | 1..2422 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1354052..1356473 | 1..2422 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1354052..1356473 | 1..2422 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1248085..1250506 | 1..2422 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1362150..1364571 | 1..2422 | 99 | Plus |
Translation from 0 to 2358
> LD23562.hyp RAYVLFVFYWAPREMGKKKDKSGKLDKQTTKKEAPSSSQANMGKAAGAND SENGIWQDSRFQHLLTDPRFRGVPKVQRKVKIDKRFQGMFTDDKFKVKYT VDKYGRPVNKSNAEDLRKFYELDENESSSGEEPAKKESDLDSEAEAEQQE RRAEERAIANLEKEESNDTLESDSSEVSQSLRQRLTNPEIDYARGEGRLY TDSSSDEDSDDEDEGPELQIDHVWGELDNDAEHTEESTRRLAVCNMDWDR IRAEDLMVMLSSFLPPGGSILSVKIYPSEFGKARMAEEEVHGPKELVERV EPEDDSDEELVRQQDSDAEEGEDYHMEKLRQYQLNRLRYYYAVVECDSID TADKVYKECDGIEYESSATRVDLRFIPDDTSFEEDTPSDECFELPDASSY KPRQFTTTALQQAKVDLTWDETALDRRELGDKLSSGQVDKLTDKELRQIV AYSSEEEDSEAEESPAEEAAQKAVSEDPQKSKPKKTSKQERIATYKNLLA DILEQEKKEKEQKYEMEMTWNVEPQHEEAQPEQQAQAELTPIEKVIQKRS EKNRQRKEQRRQRQIEARGGDAGEDSDESMVPDGIDLNDAYFAEEFANGD YAPPKTKQDKKKKKKKGKDDGEEDVEAKRQEKELELLLDDGDGRDEKQHF SLTKILKKEEQEASGSKRKRRQKLKKSKNQPQNAEKLDDDFQVNLNDNRF SAVYKSHEYNIDPTHSHYKPTKGMQQIIGEKLKRRKEQGEGGAANGDADG DEQVAPKRSKQQLEQNALVKSLKRKIQLQQQGQKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11417-PA | 771 | CG11417-PA | 1..771 | 15..785 | 3974 | 100 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3643..4362 | 14..784 | 208 | 19.6 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3682..4401 | 14..784 | 208 | 19.6 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3643..4362 | 14..784 | 208 | 19.6 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3682..4401 | 14..784 | 208 | 19.6 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4314..5012 | 28..784 | 187 | 19 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4353..5051 | 28..784 | 187 | 19 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4314..5012 | 28..784 | 187 | 19 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4174..4817 | 122..784 | 175 | 19.4 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4213..4856 | 122..784 | 175 | 19.4 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4174..4817 | 122..784 | 175 | 19.4 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3452..4037 | 162..784 | 174 | 18.5 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3491..4076 | 162..784 | 174 | 18.5 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3452..4037 | 162..784 | 174 | 18.5 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4564..5152 | 122..713 | 164 | 19.1 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4603..5191 | 122..713 | 164 | 19.1 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4564..5152 | 122..713 | 164 | 19.1 | Plus |
Translation from 43 to 2358
> LD23562.pep MGKKKDKSGKLDKQTTKKEAPSSSQANMGKAAGANDSENGIWQDSRFQHL LTDPRFRGVPKVQRKVKIDKRFQGMFTDDKFKVKYTVDKYGRPVNKSNAE DLRKFYELDENESSSGEEPAKKESDLDSEAEAEQQERRAEERAIANLEKE ESNDTLESDSSEVSQSLRQRLTNPEIDYARGEGRLYTDSSSDEDSDDEDE GPELQIDHVWGELDNDAEHTEESTRRLAVCNMDWDRIRAEDLMVMLSSFL PPGGSILSVKIYPSEFGKARMAEEEVHGPKELVERVEPEDDSDEELVRQQ DSDAEEGEDYHMEKLRQYQLNRLRYYYAVVECDSIDTADKVYKECDGIEY ESSATRVDLRFIPDDTSFEEDTPSDECFELPDASSYKPRQFTTTALQQAK VDLTWDETALDRRELGDKLSSGQVDKLTDKELRQIVAYSSEEEDSEAEES PAEEAAQKAVSEDPQKSKPKKTSKQERIATYKNLLADILEQEKKEKEQKY EMEMTWNVEPQHEEAQPEQQAQAELTPIEKVIQKRSEKNRQRKEQRRQRQ IEARGGDAGEDSDESMVPDGIDLNDAYFAEEFANGDYAPPKTKQDKKKKK KKGKDDGEEDVEAKRQEKELELLLDDGDGRDEKQHFSLTKILKKEEQEAS GSKRKRRQKLKKSKNQPQNAEKLDDDFQVNLNDNRFSAVYKSHEYNIDPT HSHYKPTKGMQQIIGEKLKRRKEQGEGGAANGDADGDEQVAPKRSKQQLE QNALVKSLKRKIQLQQQGQKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21010-PA | 780 | GF21010-PA | 35..778 | 36..767 | 2481 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12845-PA | 776 | GG12845-PA | 1..776 | 1..771 | 3313 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12825-PA | 774 | GH12825-PA | 1..770 | 1..763 | 2303 | 64.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11417-PA | 771 | CG11417-PA | 1..771 | 1..771 | 3974 | 100 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3714..4362 | 107..770 | 207 | 18.9 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3753..4401 | 107..770 | 207 | 18.9 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3714..4362 | 107..770 | 207 | 18.9 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3753..4401 | 107..770 | 207 | 18.9 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4314..5012 | 14..770 | 187 | 19 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4353..5051 | 14..770 | 187 | 19 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4314..5012 | 14..770 | 187 | 19 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4353..5051 | 14..770 | 187 | 19 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4174..4817 | 108..770 | 175 | 19.4 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4213..4856 | 108..770 | 175 | 19.4 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4174..4817 | 108..770 | 175 | 19.4 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4213..4856 | 108..770 | 175 | 19.4 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3452..4037 | 148..770 | 174 | 18.5 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3491..4076 | 148..770 | 174 | 18.5 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3452..4037 | 148..770 | 174 | 18.5 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3491..4076 | 148..770 | 174 | 18.5 | Plus |
CG2839-PA | 826 | CG2839-PA | 381..695 | 441..770 | 168 | 18.1 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4564..5152 | 108..699 | 164 | 19.1 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4603..5191 | 108..699 | 164 | 19.1 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4564..5152 | 108..699 | 164 | 19.1 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4603..5191 | 108..699 | 164 | 19.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14979-PA | 776 | GI14979-PA | 1..765 | 1..758 | 2195 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14244-PA | 441 | GL14244-PA | 1..287 | 1..279 | 904 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22714-PA | 783 | GA22714-PA | 1..780 | 1..765 | 2556 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19129-PA | 945 | GM19129-PA | 643..945 | 464..771 | 1151 | 90.6 | Plus |
Dsec\GM19129-PA | 945 | GM19129-PA | 1..221 | 1..221 | 1002 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16551-PA | 139 | GD16551-PA | 1..139 | 633..771 | 614 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15340-PA | 773 | GJ15340-PA | 1..769 | 1..763 | 2403 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16237-PA | 789 | GK16237-PA | 24..784 | 18..763 | 2195 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16680-PA | 776 | GE16680-PA | 1..776 | 1..771 | 3310 | 92.8 | Plus |