BDGP Sequence Production Resources |
Search the DGRC for LD23569
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 235 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4091-RA |
Protein status: | LD23569.pep: gold |
Preliminary Size: | 1956 |
Sequenced Size: | 1821 |
Gene | Date | Evidence |
---|---|---|
CG4091 | 2001-01-01 | Release 2 assignment |
CG4091 | 2002-04-04 | Blastp of sequenced clone |
CG4091 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4091 | 2008-04-29 | Release 5.5 accounting |
CG4091 | 2008-08-15 | Release 5.9 accounting |
CG4091 | 2008-12-18 | 5.12 accounting |
1821 bp (1821 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095033
> LD23569.complete GTTTAATCGAAGTTGCGCATAAATTTAGCTGCAAATTGTACGCAGTTCGC GGGCTTTAATGCAGCCAACCCCTTTCAGTTGCTTTCGCTAGCACTTCGAT TTGCGGACACTGGTCATCAAGCACACATTACACCCATACACACACATACT TGGACTCAAGGACTCAAGGATTCGATTCAAGGACTGCAGCAACAACAAAA ACAAAAACAGTCATGGCGGACAATGTCTTCAAGTCGCACGATATCGGGCT GCGGGCGCAGAAGAAGATCCTCTCACGCATGGCCACAAAAAACATCGCCA AGACCTTCATCGATGGCACGACGGCGTCGCTGCTGGACAACCTCTACAGG CTCTGCAAGATGCACACGGGGAACAAGGCCAAGGCGGAGAAGCTGATCAA GAACATCATCAAGATTGTGATCAAGATCGGTGTGCTCCACCGGAACAATC AGTTCAGCGACGAGGAGCTGCAGAAGGCGGAGCTCTTTAAGAGAAAGTTT CAAAACACGCAGCTGTCCATCATATCATTCTACGAAGTGGACTTCACGTT CGACCTGCCGTACCTGCAAAAGTCAATAGCCGAATCGCAAGTGGCGCTGA AGTCGATTGTGCAGCCGCATCTCACAGAAAAGTCGCTGGGCCGCATCGAC GAGGTGTTCGATTTCTTCGGCGAGGAGGCGCTGCTGGAGACGGCTTTCCG ACCAGATTCCCCCTACCGCGAGGTGATGGGAAAGATTGTGGCGGACATAA ACGCAGCCATGGAAACGGGAGATATCTGAGGAGATTCGCAAAGCGAGCTG AGCTGCAATTGCGTGCTATGAACGAAAGGCTATATATCGAAACCAAAAAG CAGCCAGTAGCTAGTTGCGAATGGAAAACGCTTGCTTAAAGCTCACCCAC CAACACCACCACCACCACCATCACCACCAAAATACAAAATCTAGGTATAA ATATGGGCCAGCAGCGGCAGAGATGAAGCAGAGCTGGGAAAGAATGGAAA AAAGACATGGGTTTAAGGAGAAGTTTAATTTAGTTCAACTAGTGATATAA CATTGACAACAATATCAAAAGTGTAAAGACGTCCGTATTGATTATTTTGA TGACAACGTTAACATTCGTGTACTCAAGGTCTATGTAGTAATAATTAGGA AGAACCAAATGCATTTCGCCAAAGGAATTCACTAAACGGAAATTGTAAAC TCGAGCAAAATGCTTTTATCGGTGTGTAAGTTGATCGTTGATCGTACGTG TGAAAGTAACTATATGTACAATAGTTTTAAGTGTTAGATGGAAAATACTT CGGCACATAAGCAATTACTTATTCGTGGTCTACTTTTTGATACTCCCAAA CTCGCTGTGTGCACCCGCAAGTAACTATATCAACGTCTTAGTCAGACCTT TGCGTACTTAACCGATCGCCGCCGATCGGAGCCACCCATCTCACCTGCAG TCGTTAGTCGATGCTAAGTTGGTTATGCTAAGTCGTCACCAGAACCTGTT TCTATTTCTATTCGTATTTGTATTCGTATTCGTATTCGTATTCCAAGCCT CCAAGGGGTCGGTAACCTTAAGCATTATTTATGATACTCCCACAATGATA TTCCAACTACCCGAAACATATCGAAACTATCTGAAAGGCAACATAGCTAA GGGGACAATAAGTTGTTTGCATTTTTCTATGACTTTTGGTTCGATATTCC AGCGATGGAGGCACAAGTTTAGTGGTTTAGATTTTAAATATTTATTTGTT TACCAACAAAACTATGTTGACTATAAAAATAAAAGCAACAATTACCAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4091-RA | 1929 | CG4091-RA | 100..1900 | 1..1801 | 9005 | 100 | Plus |
CG4091-RC | 1992 | CG4091-RC | 371..1963 | 209..1801 | 7965 | 100 | Plus |
CG4091-RB | 1784 | CG4091-RB | 163..1755 | 209..1801 | 7965 | 100 | Plus |
CG4091-RC | 1992 | CG4091-RC | 94..305 | 1..212 | 1060 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19585114..19586412 | 1796..497 | 6405 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 19586463..19586757 | 503..209 | 1445 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 19588278..19588480 | 203..1 | 985 | 99 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23698943..23700247 | 1801..497 | 6495 | 99.8 | Minus |
2R | 25286936 | 2R | 23700298..23700592 | 503..209 | 1475 | 100 | Minus |
2R | 25286936 | 2R | 23702111..23702320 | 210..1 | 1050 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23700142..23701446 | 1801..497 | 6495 | 99.8 | Minus |
2R | 25260384 | 2R | 23701497..23701791 | 503..209 | 1475 | 100 | Minus |
2R | 25260384 | 2R | 23703310..23703519 | 210..1 | 1050 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NOF | 4347 | NOF FB 4347bp Derived from X51937 (g8297) (Rel. 44, Last updated, Version 6). | 560..630 | 1791..1722 | 128 | 68.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19585114..19586405 | 504..1796 | 94 | <- | Minus |
chr2R | 19586463..19586755 | 211..503 | 99 | <- | Minus |
chr2R | 19588277..19588480 | 1..210 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4091-RC | 63..633 | 209..779 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4091-RC | 63..633 | 209..779 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4091-RC | 63..633 | 209..779 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4091-RC | 63..633 | 209..779 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4091-RC | 63..633 | 209..779 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4091-RA | 82..1877 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4091-RA | 82..1877 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4091-RA | 87..1881 | 1..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4091-RA | 82..1877 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4091-RA | 87..1881 | 1..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23698948..23700240 | 504..1796 | 100 | <- | Minus |
2R | 23700298..23700590 | 211..503 | 100 | <- | Minus |
2R | 23702111..23702320 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23698948..23700240 | 504..1796 | 100 | <- | Minus |
2R | 23700298..23700590 | 211..503 | 100 | <- | Minus |
2R | 23702111..23702320 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23698948..23700240 | 504..1796 | 100 | <- | Minus |
2R | 23700298..23700590 | 211..503 | 100 | <- | Minus |
2R | 23702111..23702320 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19586471..19587763 | 504..1796 | 100 | <- | Minus |
arm_2R | 19587821..19588113 | 211..503 | 100 | <- | Minus |
arm_2R | 19589634..19589843 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23701515..23701807 | 211..503 | 100 | <- | Minus |
2R | 23700165..23701457 | 504..1796 | 100 | <- | Minus |
2R | 23703328..23703537 | 1..210 | 100 | Minus |
Translation from 212 to 778
> LD23569.pep MADNVFKSHDIGLRAQKKILSRMATKNIAKTFIDGTTASLLDNLYRLCKM HTGNKAKAEKLIKNIIKIVIKIGVLHRNNQFSDEELQKAELFKRKFQNTQ LSIISFYEVDFTFDLPYLQKSIAESQVALKSIVQPHLTEKSLGRIDEVFD FFGEEALLETAFRPDSPYREVMGKIVADINAAMETGDI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11827-PA | 210 | GF11827-PA | 23..210 | 1..188 | 873 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20007-PA | 210 | GG20007-PA | 23..210 | 1..188 | 985 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21553-PA | 211 | GH21553-PA | 24..211 | 1..188 | 795 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sigmar-PB | 188 | CG4091-PB | 1..188 | 1..188 | 942 | 100 | Plus |
sigmar-PA | 188 | CG4091-PA | 1..188 | 1..188 | 942 | 100 | Plus |
sigmar-PC | 210 | CG4091-PC | 23..210 | 1..188 | 942 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19525-PA | 211 | GI19525-PA | 24..211 | 1..188 | 811 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17592-PA | 210 | GL17592-PA | 23..210 | 1..188 | 866 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17951-PA | 210 | GA17951-PA | 23..210 | 1..188 | 866 | 94.1 | Plus |
Dpse\GA17951-PB | 188 | GA17951-PB | 1..188 | 1..188 | 864 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15519-PA | 210 | GM15519-PA | 23..210 | 1..188 | 958 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25023-PA | 143 | GD25023-PA | 27..143 | 72..188 | 613 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21094-PA | 211 | GJ21094-PA | 24..211 | 1..188 | 841 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23170-PA | 210 | GK23170-PA | 23..210 | 1..188 | 833 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11543-PA | 210 | GE11543-PA | 23..210 | 1..188 | 985 | 99.5 | Plus |
Translation from 212 to 778
> LD23569.hyp MADNVFKSHDIGLRAQKKILSRMATKNIAKTFIDGTTASLLDNLYRLCKM HTGNKAKAEKLIKNIIKIVIKIGVLHRNNQFSDEELQKAELFKRKFQNTQ LSIISFYEVDFTFDLPYLQKSIAESQVALKSIVQPHLTEKSLGRIDEVFD FFGEEALLETAFRPDSPYREVMGKIVADINAAMETGDI*