BDGP Sequence Production Resources |
Search the DGRC for LD23573
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 235 |
Well: | 73 |
Vector: | pOT2 |
Associated Gene/Transcript | CG33156-RB |
Protein status: | LD23573.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1870 |
Gene | Date | Evidence |
---|---|---|
CG6152 | 2001-01-01 | Release 2 assignment |
CG33156 | 2003-01-01 | Sim4 clustering to Release 3 |
CG33156 | 2003-02-24 | Blastp of sequenced clone |
CG33156 | 2008-04-29 | Release 5.5 accounting |
CG33156 | 2008-08-15 | Release 5.9 accounting |
CG33156 | 2008-12-18 | 5.12 accounting |
1870 bp (1870 high quality bases) assembled on 2003-02-24
GenBank Submission: BT004874
> LD23573.complete CTTCGCAGTCGCCATTTGCATAAGGTTGATTTACAGTTGAGAGAACTTAG TCTGCATACTGCAAAGGTGGAGAAAACAAGCCAAATATTCTGAAAATCCT GTTGAAATATTGAACAAATGTTTCCCCTGCGTCCTGATCAGCCGCAGGCG GTTGCCTCGTTTCCGCTCCACAGCTCCTTGAGCATCGAAGAGTTCAACAA TGTGAAGTGGGAGGATATAAATGATTGCAATAACAATTGCATTCGGGAGG AGCCAATTCTAAGGCCCAAAACCAATCGCCATATTTTAAGGCGCACTCGC AGCTTGAATGCACCCTCGCCTGTCCAGCAGTTCGGACCATGTGGTCGCAT CATGAAAAACTCCGCCATGGTGATGCAGATCCAGGATCCGGCTAGTCAAC GTCTCACCTGGTACAAGCCACCACTCACCGTGCTCGTGATCAAGAAGGTC AGCGATGCCTCGGTGCTGGCACCGTTCGTCTACCTGGTGGACTGGCTGCT GCAGGAGAAGAACATGGTCGTTTGGGTGGAGTCGGCCGTGCTGGAGGATG TCCAGCTCAACGAAAATGTGCGATTCAAGGCCATTCGGGATAAGCTAGTG ACTTTCAAAGATGGCCGAGATGATCTGACCGATCGCATAGACTTTATAGT TTGCCTGGGTGGCGATGGCACCCTGCTGTATGCTTCGCTGCTCTTCCAGC AATCTGTGCCCCCCGTCATGGCCTTCCATTTGGGCTCCCTCGGCTTTCTC ACACCCTTCCGTTTCGATAACTTTGAGGAGCAGCTGACCAGCGTCCTGGA GGGTCACGCTGCCCTAACGCTTCGCAGTCGTTTGCGCTGTGTTATGCATC GCAGGAGCGATAGGAAACACGAGGCTAAGACTCTGGAGGCAGATCTAGAT GGTGAGGCGCGACCTGCAGCCAACAGCATACTGGTGCTCAACGAAGTGGT CATTGATCGTGGTCCATCGCCGTATCTGAGCAATATTGATCTGTTTCTGG ACGGAAAGTATATCACGTCGGTGCAGGGCGACGGTCTGATCGTATCGACG CCCACGGGAAGCACGGCATATGCGGCGGCGGCCGGTGCGTCCATGATCCA TCCCTCCGTGCCGGCGATTATGGTGACTCCCATCTGCCCGCATTCGCTTA GCTTCCGACCCATTGTGGTGCCAGCAGGAGTGGAGCTGAAGATATCAGTA TCCCCCGAGAGCCGCAACACATCGTGGGTTAGCTTCGATGGACGCAACAG GCAGGAGCTCTTCCATGGCGACAGCCTTCGCGTGACCACCTCCATTTATC CCGTGCCATGCATCTGCGCCCAGGATCAGATATCCGACTGGTTCGCCTCC CTAGCCGACGGACTGCACTGGAATGTGCGCAAGCGACAGAAGTGCCTGGA CGAGCTGTCGGATCTGACGGCATCCGGATCGGAGGATACGCTGGACGAGA TCGAGAACATGAAATTGTACGATGTGTAGTGCGTAAGTCCCTGCAGCTAA TAGAAACCGTAGGTTAGGGCTTTTAGTTGTAGTTCTAATGCTTTCGCCCT TTGCTTAGTGTGTAATTTTTGTAGTATTTTCGGTAACAAATTGTTTAAAC ACATTTGCCAAATGTATGGAAATCATTTTATAACTTTTACTGTTCGAAAC GCCAGTGCTCTTGCAATATTGTACATTTCAGCTAGTTAAATATAAATGCA GTTGCAAACTGTAGCAAAAAGTTGTAGAGAGCATTGAATGAATGAATCTC AAATCTTTGAGAATTAACATTAAAAAGTCCCACTTCTAAAAAGATAAGCA ATTGAATTATATATTACTTAATAAAATAATACCTGTAAATTCAAAAAAAA AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33156-RB | 1854 | CG33156-RB | 13..1854 | 1..1842 | 9210 | 100 | Plus |
CG33156-RA | 2024 | CG33156-RA | 380..1933 | 290..1843 | 7770 | 100 | Plus |
CG33156-RF | 1795 | CG33156-RF | 242..1795 | 289..1842 | 7770 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9435545..9436197 | 1842..1190 | 3265 | 100 | Minus |
chr2R | 21145070 | chr2R | 9436255..9436837 | 1191..609 | 2915 | 100 | Minus |
chr2R | 21145070 | chr2R | 9436900..9437219 | 608..289 | 1600 | 100 | Minus |
chr2R | 21145070 | chr2R | 9437287..9437577 | 291..1 | 1455 | 100 | Minus |
chr2R | 21145070 | chr2R | 9425499..9425769 | 1191..921 | 770 | 85.6 | Minus |
chr2R | 21145070 | chr2R | 9426405..9426660 | 539..281 | 600 | 83 | Minus |
chr2R | 21145070 | chr2R | 9425926..9426156 | 839..609 | 585 | 83.5 | Minus |
chr2R | 21145070 | chr2R | 9425100..9425352 | 1442..1190 | 545 | 81 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13548243..13548896 | 1843..1190 | 3270 | 100 | Minus |
2R | 25286936 | 2R | 13548954..13549536 | 1191..609 | 2915 | 100 | Minus |
2R | 25286936 | 2R | 13549599..13549918 | 608..289 | 1600 | 100 | Minus |
2R | 25286936 | 2R | 13549986..13550276 | 291..1 | 1455 | 100 | Minus |
2R | 25286936 | 2R | 13538198..13538468 | 1191..921 | 770 | 85.6 | Minus |
2R | 25286936 | 2R | 13539104..13539359 | 539..281 | 600 | 83 | Minus |
2R | 25286936 | 2R | 13538625..13538855 | 839..609 | 585 | 83.5 | Minus |
2R | 25286936 | 2R | 13537799..13538051 | 1442..1190 | 545 | 81 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13549442..13550095 | 1843..1190 | 3270 | 100 | Minus |
2R | 25260384 | 2R | 13550153..13550735 | 1191..609 | 2915 | 100 | Minus |
2R | 25260384 | 2R | 13550798..13551117 | 608..289 | 1600 | 100 | Minus |
2R | 25260384 | 2R | 13551185..13551475 | 291..1 | 1455 | 100 | Minus |
2R | 25260384 | 2R | 13539397..13539667 | 1191..921 | 770 | 85.6 | Minus |
2R | 25260384 | 2R | 13539824..13540054 | 839..609 | 585 | 83.5 | Minus |
2R | 25260384 | 2R | 13538998..13539250 | 1442..1190 | 545 | 81 | Minus |
2R | 25260384 | 2R | 13540392..13540558 | 447..281 | 505 | 86.8 | Minus |
2R | 25260384 | 2R | 13540303..13540380 | 539..462 | 210 | 84.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9436900..9437217 | 291..608 | 100 | <- | Minus |
chr2R | 9437288..9437577 | 1..290 | 100 | Minus | |
chr2R | 9435545..9436195 | 1192..1842 | 100 | <- | Minus |
chr2R | 9436255..9436837 | 609..1191 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33156-RB | 1..1362 | 118..1479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33156-RB | 1..1362 | 118..1479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33156-RB | 1..1362 | 118..1479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33156-RB | 1..1362 | 118..1479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33156-RB | 1..1362 | 118..1479 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33156-RB | 1..1841 | 2..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33156-RB | 1..1841 | 2..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33156-RB | 1..1824 | 19..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33156-RB | 1..1841 | 2..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33156-RB | 1..1824 | 19..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13548244..13548894 | 1192..1842 | 100 | <- | Minus |
2R | 13548954..13549536 | 609..1191 | 100 | <- | Minus |
2R | 13549599..13549916 | 291..608 | 100 | <- | Minus |
2R | 13549987..13550276 | 1..290 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13548244..13548894 | 1192..1842 | 100 | <- | Minus |
2R | 13548954..13549536 | 609..1191 | 100 | <- | Minus |
2R | 13549599..13549916 | 291..608 | 100 | <- | Minus |
2R | 13549987..13550276 | 1..290 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13548244..13548894 | 1192..1842 | 100 | <- | Minus |
2R | 13548954..13549536 | 609..1191 | 100 | <- | Minus |
2R | 13549599..13549916 | 291..608 | 100 | <- | Minus |
2R | 13549987..13550276 | 1..290 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9435749..9436399 | 1192..1842 | 100 | <- | Minus |
arm_2R | 9436459..9437041 | 609..1191 | 100 | <- | Minus |
arm_2R | 9437104..9437421 | 291..608 | 100 | <- | Minus |
arm_2R | 9437492..9437781 | 1..290 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13550798..13551115 | 291..608 | 100 | <- | Minus |
2R | 13551186..13551475 | 1..290 | 100 | Minus | |
2R | 13549443..13550093 | 1192..1842 | 100 | <- | Minus |
2R | 13550153..13550735 | 609..1191 | 100 | <- | Minus |
Translation from 117 to 1478
> LD23573.hyp MFPLRPDQPQAVASFPLHSSLSIEEFNNVKWEDINDCNNNCIREEPILRP KTNRHILRRTRSLNAPSPVQQFGPCGRIMKNSAMVMQIQDPASQRLTWYK PPLTVLVIKKVSDASVLAPFVYLVDWLLQEKNMVVWVESAVLEDVQLNEN VRFKAIRDKLVTFKDGRDDLTDRIDFIVCLGGDGTLLYASLLFQQSVPPV MAFHLGSLGFLTPFRFDNFEEQLTSVLEGHAALTLRSRLRCVMHRRSDRK HEAKTLEADLDGEARPAANSILVLNEVVIDRGPSPYLSNIDLFLDGKYIT SVQGDGLIVSTPTGSTAYAAAAGASMIHPSVPAIMVTPICPHSLSFRPIV VPAGVELKISVSPESRNTSWVSFDGRNRQELFHGDSLRVTTSIYPVPCIC AQDQISDWFASLADGLHWNVRKRQKCLDELSDLTASGSEDTLDEIENMKL YDV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33156-PB | 453 | CG33156-PB | 1..453 | 1..453 | 2358 | 100 | Plus |
CG33156-PF | 450 | CG33156-PF | 11..450 | 10..453 | 2052 | 90.5 | Plus |
CG33156-PA | 454 | CG33156-PA | 60..454 | 59..453 | 2041 | 100 | Plus |
CG33156-PE | 490 | CG33156-PE | 96..490 | 59..453 | 2041 | 100 | Plus |
CG33156-PC | 375 | CG33156-PC | 1..375 | 79..453 | 1933 | 100 | Plus |
Translation from 117 to 1478
> LD23573.pep MFPLRPDQPQAVASFPLHSSLSIEEFNNVKWEDINDCNNNCIREEPILRP KTNRHILRRTRSLNAPSPVQQFGPCGRIMKNSAMVMQIQDPASQRLTWYK PPLTVLVIKKVSDASVLAPFVYLVDWLLQEKNMVVWVESAVLEDVQLNEN VRFKAIRDKLVTFKDGRDDLTDRIDFIVCLGGDGTLLYASLLFQQSVPPV MAFHLGSLGFLTPFRFDNFEEQLTSVLEGHAALTLRSRLRCVMHRRSDRK HEAKTLEADLDGEARPAANSILVLNEVVIDRGPSPYLSNIDLFLDGKYIT SVQGDGLIVSTPTGSTAYAAAAGASMIHPSVPAIMVTPICPHSLSFRPIV VPAGVELKISVSPESRNTSWVSFDGRNRQELFHGDSLRVTTSIYPVPCIC AQDQISDWFASLADGLHWNVRKRQKCLDELSDLTASGSEDTLDEIENMKL YDV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11176-PA | 543 | GF11176-PA | 96..543 | 6..453 | 2091 | 91.1 | Plus |
Dana\GF11178-PA | 544 | GF11178-PA | 108..544 | 59..453 | 1584 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22480-PA | 643 | GG22480-PA | 210..643 | 20..453 | 2286 | 97.9 | Plus |
Dere\GG22483-PA | 549 | GG22483-PA | 110..549 | 59..453 | 1601 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22631-PA | 442 | GH22631-PA | 49..442 | 59..453 | 1912 | 90.4 | Plus |
Dgri\GH22633-PA | 564 | GH22633-PA | 123..563 | 59..452 | 1622 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33156-PB | 453 | CG33156-PB | 1..453 | 1..453 | 2358 | 100 | Plus |
CG33156-PF | 450 | CG33156-PF | 11..450 | 10..453 | 2052 | 90.5 | Plus |
CG33156-PE | 490 | CG33156-PE | 96..490 | 59..453 | 2041 | 100 | Plus |
CG33156-PA | 454 | CG33156-PA | 60..454 | 59..453 | 2041 | 100 | Plus |
CG33156-PC | 375 | CG33156-PC | 1..375 | 79..453 | 1933 | 100 | Plus |
CG6145-PF | 484 | CG6145-PF | 33..483 | 47..452 | 1623 | 73.2 | Plus |
CG6145-PE | 483 | CG6145-PE | 43..482 | 58..452 | 1622 | 74.4 | Plus |
CG6145-PC | 548 | CG6145-PC | 109..547 | 59..452 | 1617 | 74.3 | Plus |
CG6145-PA | 520 | CG6145-PA | 81..519 | 59..452 | 1617 | 74.3 | Plus |
CG6145-PB | 420 | CG6145-PB | 1..419 | 79..452 | 1519 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21327-PA | 412 | GI21327-PA | 8..412 | 59..453 | 1856 | 87.3 | Plus |
Dmoj\GI21329-PA | 560 | GI21329-PA | 119..560 | 59..453 | 1629 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17065-PA | 546 | GL17065-PA | 121..546 | 22..453 | 1918 | 88.2 | Plus |
Dper\GL17067-PA | 557 | GL17067-PA | 109..550 | 59..453 | 1618 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17329-PA | 605 | GA17329-PA | 155..605 | 1..453 | 2072 | 89.4 | Plus |
Dpse\GA24350-PA | 557 | GA24350-PA | 109..550 | 59..453 | 1619 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20268-PA | 523 | GM20268-PA | 90..523 | 20..453 | 2298 | 99.3 | Plus |
Dsec\GM20270-PA | 548 | GM20270-PA | 109..548 | 59..453 | 1600 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25753-PA | 519 | GD25753-PA | 80..518 | 59..452 | 1596 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19672-PA | 448 | GJ19672-PA | 38..448 | 42..453 | 1919 | 87.9 | Plus |
Dvir\GJ19674-PA | 557 | GJ19674-PA | 117..556 | 59..452 | 1611 | 74.9 | Plus |