Clone LD23587 Report

Search the DGRC for LD23587

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:235
Well:87
Vector:pOT2
Associated Gene/TranscriptHrd3-RA
Protein status:LD23587.pep: gold
Preliminary Size:2960
Sequenced Size:4264

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10221 2000-02-14 Blastp of sequenced clone
CG10221 2001-01-01 Release 2 assignment
CG10221 2003-01-01 Sim4 clustering to Release 3
CG10221 2008-04-29 Release 5.5 accounting
CG10221 2008-08-15 Release 5.9 accounting
CG10221 2008-12-18 5.12 accounting

Clone Sequence Records

LD23587.complete Sequence

4264 bp (4264 high quality bases) assembled on 2000-02-14

GenBank Submission: AF181652

> LD23587.complete
CTTACGTGTGAAAAATTAAGGAAACCGAACCAAGGTATTCCAACCACCAC
CAAGTCGAGGTGGCCAAAATGAGCTACCAGTAAGTCAAACGAATCCACCC
AGAAGCAGCAATCCACTCTTTTTGCCGACCCTGCGCCCCAAGAAAACAGT
AAATAACACAACACGTCAGAAGTGGAAGAGCACCATATAGACGCAGCAAA
GGCGAAGACCAAAATTGCCGTTGTACATCCACATTGCCATCGAGAAAGGC
AGATAGGCGACGATGAAGGCCAACAGCTGGATGTGCCTGCTGGCGCTGCT
TCTCGCCTGGCAGCTGCGAGCGGAGGAGCTCCAAGGGCCCAACATTGATG
GTACGGGCAGCAGTTTGGGTTCGGCCACAGGTACGGGTACGGGAACGGGA
TTGGGCACGGGAACAGCCACGCCAACGCTGCCCAATGAGCCCTCCACCCA
GGCGGAGGCGGAGGAGGTGACCACGGCGGAATCAGAGTCGCGGGTTCCGT
CGGAAAGCAACGAACGCAAGGCAGACAAACCCAAGGAGTCCACAAAGTTT
GCTTCCAGGACGAAGGTTATGCCGGCTTCCCTGTTCGAACGCCTGTGGAA
CGAAAGTCTGATCAGGCGGCAAAAGCTGAAAGCCGAGATCGAGCGCATCG
AAGCCAAACGCAAATCCACTGAAGTGTTAGAACTTACCCCAGACCAAATA
GAAGCTCAAACCGTGTACGACAACGCAATGGACATGTTGGCCAAGCCAAG
CACGGATAAGCGAGTAGCCATGATTTTGCTTAAGAAGGCTGCTGCATTTA
ATCACCTCAAGGCGAGGGCGGAACTAGCCTGGGCCGCCCTACTGGGTCAA
TGGATGGACTTTGATTTCAACCATGCTGTCGATGAGTTTGAGAGTCTGGC
CAACGAAGGCGTCCCAGAGGCTCACATGGGCCTGGGATTCCTTTATTCGG
TGGGCGTTGGCGGTAAAAATGTAAGCCAGCCCCTGGCACTGATCCACTAT
AGCCTGGCTGCCCTCGGTGATAATACTCCGGCGCAAATGGCCATGGGGTA
TCGCTATCTTTATGGCATCAATGTGCCCATTAGCTGTGAGAAGGCGCTGA
TCCACTACAAGCGAGTAGCCAAAAAAGTGGCTTCCAAGATAACCTTCGCC
AATGGGCCGGTTGTGCATCGGGTAAGACTGCTGGATGACCTAGAGAATCC
CGGCAGTTCCGAAACTGAGATTGTCGACTATTACAAACTTCTGGCCGATA
AAGGCGACATCCAGTCGCAGGTGGGATTGGGTCAGGTGTACTATCAGGGC
GGCAAGGTCACCGAGCAAGATCATCAAAAGGCTTTGGAATATTTCAAAAT
GGCCGCCGATGCAGGTAGTGCAGTTGGCATCGCGTTTTTAGGCAAGCTTT
ATCTGGAAGGAAGTGATCAAATCAGGGCCGATAATGATGCAGCATTTGGG
TACTTCTCCAAGGCCGCTGAAATGGGGGATCCAGTTGGTCAAAGCGGACT
GGGCCTCATGTATCTAAAGGGTTTAGGTGTTCCCAAAGACTCCATCAAGG
CATTATCCTATTTCACTCAGGCGGCTGATCAAGGTTGGGTTGATGGGCAA
CTGCAGCTGGGCAACATGTATTTCACTGGCAATGGTGTAAAAACCGACTA
CAAGTTAGCCTTTAAGTACTTCAACCTGGCCACCCAATCAGGCCATGTTT
TAGCCTATTATAATCTGGGAGTGATGAATGCCTACGGTATGGGAATGCTG
CGTTCATGTCCAGCAGCAGTAGAATTCTTCAAGACTGTTTCGGAGCGTGG
CCGTTGGAGCAGCCGATTGATGATGGCCTACAGCGACTATAAAAATAACC
GCATCGACGAGGCCTACATGCAGTACTCGTTGATGGCCGAAATGGGCTAT
GAGGTGGCTCAAAGTAATGCCGCCTTTTTACTAGACCGCAAGGAGGTGCA
TGTGTTCAACGATCGGCACGAAGATCTGATTCGTGCCTTCTACTACTGGA
AACGAGCAGCCGGACAGGGCTATTCTGCGGCCCAAGTCAAGCTGGGCGAT
TACTATTACTACGGTTGGGGTACTTCGACGGACTTCGAGACTGCCGCTGC
TCTTTACAGGAAAGCCTCTGAGCAGCAATATAATGCCCAAGCCATGTTCA
ACTTGGGATACATGCACGAGCAAGGGCTCGGAATGAAGAAAGACTGGCAT
CTGGCAAAGAGATTATACGATTTGGCTGCGGAAACCAATTCAGACGCCAA
AGTGCCTGTGGCCATTGCGCTTTTTAAGCTACAAATGTTGGCCACGATTG
AATCAATCAAGGAGTCACCTTACAGGTTCATCTTCTACATGGATGAAAAT
ATTGCTGCCAATTGGGACTTGTACATGATTACCGTTCTAACTCTACTGCT
GGGCATCATCATGTACATGAGGCGTCCATTTCAGCAGCCGGATCAGCCGG
CACAGCAGCCAGCTGCAGATGACATTGCTGCTGCGCCAGTTAACTTGGCG
CCGGTTGGAGCGGAAGCAGCACCTGTAGCCGCAGTGGTCGAAGGTGTGGG
CGTCACACCACCTGCCGCCGCAGTTTCATCTCACGATGCTGTGGCCGCGT
CCTCCTCTACGGAAACCTCATCAACCACTGCCACGTCCCTTGTCGATGCA
GCGTCACAAGGGGGAAGTGGCACGACATCTGCGGCGCCGGATGGCGCTAA
CACACTCGATCCCACTGGTTAGTCTTAGTAACTTGGTAAATCATCCCTCT
AGGCTGAGAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAAT
AAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTAT
TGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGA
GTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCT
TGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAG
GGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTAT
GGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCT
TCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCG
AATTTCAACAGGTAAGTTAGTTGCTAGAACCCATGGCTCCTTTGCCGACG
CTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGC
TGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGA
GATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGAC
TAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCT
AGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACC
CAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGA
CAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGA
AATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTT
CTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATA
CCATAAGTCGTTTTTGCTCACGAATATCAGACCAGTCAACAAGTACAATG
GGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGC
GAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTT
TGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCG
GTAAGAGTGAGAGTTTTACAGTCAAGTAATGCGTGGCAAGCCAACGTTAA
GCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGT
CGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTC
GCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATG
ATTTTTACCAAAATCATTAGGGGATTCATCAGCCCTCTAGGTTAATTAGT
GTGCGTGTAAATATTTATCATCTAATTTCGCCCGATGTAATATTTTTTAT
TAATTCTAAAACCGACCTTTTTAGATATTTAAAAAATATCGTACTCAGAA
TGTAAATGTTGTACTGATAAACCAATGAATCGCTCGACATTTGAAAAAAA
AAAAAAAAAAAAAA

LD23587.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:42:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG10221-RA 3189 CG10221-RA 256..3008 1..2753 13765 100 Plus
CG10221.a 3134 CG10221.a 239..2552 1..2314 11570 100 Plus
CG10221.a 3134 CG10221.a 2551..2980 2324..2753 2150 100 Plus
CG10221-RA 3189 CG10221-RA 2995..3161 4078..4244 820 99.4 Plus
CG10221.a 3134 CG10221.a 2967..3133 4078..4244 820 99.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19579806..19580553 1450..703 3680 99.5 Minus
chr3R 27901430 chr3R 19580605..19581308 704..1 3475 99.6 Minus
chr3R 27901430 chr3R 19578183..19578623 2753..2313 2145 99.1 Minus
chr3R 27901430 chr3R 19578946..19579281 2110..1775 1650 99.4 Minus
chr3R 27901430 chr3R 19578682..19578891 2314..2105 1050 100 Minus
chr3R 27901430 chr3R 19579565..19579740 1625..1450 880 100 Minus
chr3R 27901430 chr3R 19578031..19578196 4243..4078 815 99.4 Minus
chr3R 27901430 chr3R 19579347..19579495 1774..1626 745 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:13:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:40:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23756398..23757145 1450..703 3740 100 Minus
3R 32079331 3R 23757197..23757900 704..1 3520 100 Minus
3R 32079331 3R 23754775..23755215 2753..2313 2205 100 Minus
3R 32079331 3R 23755538..23755873 2110..1775 1680 100 Minus
3R 32079331 3R 23755274..23755483 2314..2105 1050 100 Minus
3R 32079331 3R 23756157..23756332 1625..1450 880 100 Minus
3R 32079331 3R 23754622..23754788 4244..4078 820 99.4 Minus
3R 32079331 3R 23755939..23756087 1774..1626 745 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 23497229..23497976 1450..703 3740 100 Minus
3R 31820162 3R 23498028..23498731 704..1 3520 100 Minus
3R 31820162 3R 23495606..23496046 2753..2313 2205 100 Minus
3R 31820162 3R 23496369..23496704 2110..1775 1680 100 Minus
3R 31820162 3R 23496105..23496314 2314..2105 1050 100 Minus
3R 31820162 3R 23496988..23497163 1625..1450 880 100 Minus
3R 31820162 3R 23495453..23495619 4244..4078 820 99.4 Minus
3R 31820162 3R 23496770..23496918 1774..1626 745 100 Minus
Blast to na_te.dros performed on 2019-03-16 09:40:21 has no hits.

LD23587.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:41:20 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19578183..19578621 2315..2753 99 <- Minus
chr3R 19578682..19578886 2110..2314 100 <- Minus
chr3R 19578947..19579281 1775..2109 99 <- Minus
chr3R 19579347..19579495 1626..1774 100 <- Minus
chr3R 19579565..19579739 1451..1625 100 <- Minus
chr3R 19579806..19580551 705..1450 99 <- Minus
chr3R 19580605..19581308 1..704 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:00:23 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
CG10221-RA 1..2460 263..2722 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:35:36 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
Hrd3-RA 1..2460 263..2722 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:03:47 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
Hrd3-RA 1..2460 263..2722 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:11:29 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
CG10221-RA 1..2460 263..2722 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:16:16 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
Hrd3-RA 1..2460 263..2722 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:38:34 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
CG10221-RA 239..2991 1..2753 100 == Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:35:36 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
Hrd3-RA 239..2991 1..2753 100 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:03:47 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
Hrd3-RA 118..2870 1..2753 100 == Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:11:29 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
CG10221-RA 239..2991 1..2753 100 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:16:16 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
Hrd3-RA 118..2870 1..2753 100 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:20 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23754775..23755213 2315..2753 100 <- Minus
3R 23755274..23755478 2110..2314 100 <- Minus
3R 23755539..23755873 1775..2109 100 <- Minus
3R 23755939..23756087 1626..1774 100 <- Minus
3R 23756157..23756331 1451..1625 100 <- Minus
3R 23756398..23757143 705..1450 100 <- Minus
3R 23757197..23757900 1..704 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:20 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23754775..23755213 2315..2753 100 <- Minus
3R 23755274..23755478 2110..2314 100 <- Minus
3R 23755539..23755873 1775..2109 100 <- Minus
3R 23755939..23756087 1626..1774 100 <- Minus
3R 23756157..23756331 1451..1625 100 <- Minus
3R 23756398..23757143 705..1450 100 <- Minus
3R 23757197..23757900 1..704 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:20 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23754775..23755213 2315..2753 100 <- Minus
3R 23755274..23755478 2110..2314 100 <- Minus
3R 23755539..23755873 1775..2109 100 <- Minus
3R 23755939..23756087 1626..1774 100 <- Minus
3R 23756157..23756331 1451..1625 100 <- Minus
3R 23756398..23757143 705..1450 100 <- Minus
3R 23757197..23757900 1..704 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:03:47 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19581879..19582053 1451..1625 100 <- Minus
arm_3R 19580497..19580935 2315..2753 100 <- Minus
arm_3R 19580996..19581200 2110..2314 100 <- Minus
arm_3R 19581261..19581595 1775..2109 100 <- Minus
arm_3R 19581661..19581809 1626..1774 100 <- Minus
arm_3R 19582120..19582865 705..1450 100 <- Minus
arm_3R 19582919..19583622 1..704 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:47:55 Download gff for LD23587.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23495606..23496044 2315..2753 100 <- Minus
3R 23496105..23496309 2110..2314 100 <- Minus
3R 23496370..23496704 1775..2109 100 <- Minus
3R 23496770..23496918 1626..1774 100 <- Minus
3R 23496988..23497162 1451..1625 100 <- Minus
3R 23497229..23497974 705..1450 100 <- Minus
3R 23498028..23498731 1..704 100   Minus

LD23587.pep Sequence

Translation from 262 to 2721

> LD23587.pep
MKANSWMCLLALLLAWQLRAEELQGPNIDGTGSSLGSATGTGTGTGLGTG
TATPTLPNEPSTQAEAEEVTTAESESRVPSESNERKADKPKESTKFASRT
KVMPASLFERLWNESLIRRQKLKAEIERIEAKRKSTEVLELTPDQIEAQT
VYDNAMDMLAKPSTDKRVAMILLKKAAAFNHLKARAELAWAALLGQWMDF
DFNHAVDEFESLANEGVPEAHMGLGFLYSVGVGGKNVSQPLALIHYSLAA
LGDNTPAQMAMGYRYLYGINVPISCEKALIHYKRVAKKVASKITFANGPV
VHRVRLLDDLENPGSSETEIVDYYKLLADKGDIQSQVGLGQVYYQGGKVT
EQDHQKALEYFKMAADAGSAVGIAFLGKLYLEGSDQIRADNDAAFGYFSK
AAEMGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLG
NMYFTGNGVKTDYKLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCP
AAVEFFKTVSERGRWSSRLMMAYSDYKNNRIDEAYMQYSLMAEMGYEVAQ
SNAAFLLDRKEVHVFNDRHEDLIRAFYYWKRAAGQGYSAAQVKLGDYYYY
GWGTSTDFETAAALYRKASEQQYNAQAMFNLGYMHEQGLGMKKDWHLAKR
LYDLAAETNSDAKVPVAIALFKLQMLATIESIKESPYRFIFYMDENIAAN
WDLYMITVLTLLLGIIMYMRRPFQQPDQPAQQPAADDIAAAPVNLAPVGA
EAAPVAAVVEGVGVTPPAAAVSSHDAVAASSSTETSSTTATSLVDAASQG
GSGTTSAAPDGANTLDPTG*

LD23587.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18742-PA 804 GF18742-PA 1..716 1..723 3238 84 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:57:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12409-PA 824 GG12409-PA 1..824 1..819 3539 87.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:57:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11624-PA 821 GH11624-PA 1..789 1..770 3112 75.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
Hrd3-PB 819 CG10221-PB 1..819 1..819 4211 100 Plus
Hrd3-PA 819 CG10221-PA 1..819 1..819 4211 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22400-PA 816 GI22400-PA 1..748 1..755 3183 78.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:57:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24274-PA 806 GL24274-PA 1..739 1..747 3141 79.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:57:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10167-PA 811 GA10167-PA 1..739 1..747 3138 79.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:57:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23543-PA 818 GM23543-PA 1..818 1..819 3763 95.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:57:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18357-PA 818 GD18357-PA 1..818 1..819 3767 96 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:57:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24649-PA 810 GJ24649-PA 1..748 7..754 3101 77.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22768-PA 817 GK22768-PA 1..725 1..734 3138 78.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:57:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23928-PA 822 GE23928-PA 1..822 1..819 3773 91 Plus

LD23587.hyp Sequence

Translation from 262 to 2721

> LD23587.hyp
MKANSWMCLLALLLAWQLRAEELQGPNIDGTGSSLGSATGTGTGTGLGTG
TATPTLPNEPSTQAEAEEVTTAESESRVPSESNERKADKPKESTKFASRT
KVMPASLFERLWNESLIRRQKLKAEIERIEAKRKSTEVLELTPDQIEAQT
VYDNAMDMLAKPSTDKRVAMILLKKAAAFNHLKARAELAWAALLGQWMDF
DFNHAVDEFESLANEGVPEAHMGLGFLYSVGVGGKNVSQPLALIHYSLAA
LGDNTPAQMAMGYRYLYGINVPISCEKALIHYKRVAKKVASKITFANGPV
VHRVRLLDDLENPGSSETEIVDYYKLLADKGDIQSQVGLGQVYYQGGKVT
EQDHQKALEYFKMAADAGSAVGIAFLGKLYLEGSDQIRADNDAAFGYFSK
AAEMGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLG
NMYFTGNGVKTDYKLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCP
AAVEFFKTVSERGRWSSRLMMAYSDYKNNRIDEAYMQYSLMAEMGYEVAQ
SNAAFLLDRKEVHVFNDRHEDLIRAFYYWKRAAGQGYSAAQVKLGDYYYY
GWGTSTDFETAAALYRKASEQQYNAQAMFNLGYMHEQGLGMKKDWHLAKR
LYDLAAETNSDAKVPVAIALFKLQMLATIESIKESPYRFIFYMDENIAAN
WDLYMITVLTLLLGIIMYMRRPFQQPDQPAQQPAADDIAAAPVNLAPVGA
EAAPVAAVVEGVGVTPPAAAVSSHDAVAASSSTETSSTTATSLVDAASQG
GSGTTSAAPDGANTLDPTG*

LD23587.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:15:17
Subject Length Description Subject Range Query Range Score Percent Strand
Hrd3-PB 819 CG10221-PB 1..819 1..819 4211 100 Plus
Hrd3-PA 819 CG10221-PA 1..819 1..819 4211 100 Plus