BDGP Sequence Production Resources |
Search the DGRC for LD23605
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 236 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3534-RA |
Protein status: | LD23605.pep: gold |
Preliminary Size: | 4600 |
Sequenced Size: | 1871 |
Gene | Date | Evidence |
---|---|---|
CG3534 | 2001-01-01 | Release 2 assignment |
CG3534 | 2001-09-19 | Blastp of sequenced clone |
CG3534 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3534 | 2008-04-29 | Release 5.5 accounting |
CG3534 | 2008-08-15 | Release 5.9 accounting |
CG3534 | 2008-12-18 | 5.12 accounting |
1871 bp (1871 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058530
> LD23605.complete GAAGCAGTTTGAACATGGGTCCGCCAAAGCAGCTGAAACGAACCTTTCTT GGCTTCGACTTGAGCACGCAAAAGCTCAAAGCCGTCCTGCTGGGCTCCAG TTTGGAGGTGGTTGCCGCGGCTGAAGTGAAATTCGACACCGACTTGCCGG AGTTCCGGACCACCGGTGGAGCCAACGCTGGATCCATCAAAAATGAATAC TTTGTACAACCAGTGATGTGGGTGAAGGCCATGGACATTGTCCTGGACCG ACTGGTTATGCAGCAAGCGGATCTTAGCACCGTAGCTGCCATCAGTGGCT CCGGACAGCAGCACGGATCGCTCTACTGGTCCAAACATGGAATCAACACG CTGCAAAACCTCGATTCCGAGAAGTTCCTTCACGCACAAATCGACGACTC CGCCTTTGTGGTAAATCGTACTCCGATTTGGATGGACGCCACCACCACCA AACAGTGCCTAGAGATGGAGATGGCTGTTGGTGGCAAACTTAACATGGTG GAACTGACGGGCTCGAAGTGCTACGAACGTTTTACGGGTCCCCAAATTAG AAAGATATATCAGCAACGCTGCCACGCCTACGAAGAGGCCAACCGAATCT CATTGGTCAGCAGTTTTATATCATCGCTATTTCTGGGCTCCGTCGCTCCA ATTGACTTCAGTGATGGTTCCGGCATGAATCTGCTGGACATCCGCAAGAA GAACTGGTCCAAAGAATGCCTAAATGTTTGTGCACCCGATTTGGACAAGC GCCTGGACATTCCGGTCAGTCCAAATTCGATTTTAGGCAACGTCTCTCCG TACTTTGTGGAGCGCTTTAGTTTTTCGCCCGATTGCAAAGTGGCTGCTAG CACGGGGGACAATCCTTCGGCGCTGTCTGGAATGTTGGTGGGCAGCAGCT GGCTTACCATTTCCATGGGCACAAGTGACACCCTAATGATGAGCTTGAAG GAGCCGCTAAACTGGGAGGAGGGTCATATACTCTGCCATCCAACTGAAAC GGAAGAATTCATGGGCCTTCTATGTTTTAGAAATGCTTCATTGGTCCGTG AGGAAATGAACAAGAAGACAACCGGCGGCGATTGGGATAAATTCAATGAG TATCTCGACTCCACGCCCCGTGGAAACTTTGGGAACATGGCCGTGCACTT TAACGACATGGAAATCATTCCCAAGGCGCAGGGTATTCTGCGATGGAACA GGGAAATGGATCCCAGTTCCCCGGACGCGGCTAGGGGTGTAATCAAATTC AGCTCGCCCCAAATCGAAATTCGAGCCCTAGTTGAAGGTCAGATGCTGCA TCACCGGGCTGTGGCTGAAGACCTTGGCTACAAATTCGGACCCGAGACAC AAATCCTTGTCACAGGAGGCGCATCTGTTAACAAATCAATCCTGCAAACA ATTGCCGATGTGTTCAATGCTCCCGTCCATATCCAGGATGAAGGATTTGA GGCTGCCCTACTGGGAGCCGCTTATCGATCCGCCTACGCTCTGTACCTTC AAGAGGCAGGTGATGGGGTGACGCCTCTCTGTTACCGAGATTATATCCTA AGTCTGACAAGTAACAAACTGAGCCTTGTATGCGAACCACACAAGGACAG CGAGGAAATCTACGCTCCAATGCTACAACGATATCGCGAAATGGCGCGCG TCCTGTCCAATCCTAACACATAAACTCTCCGAAAGCCCAACGTAACATTC CAGTTTATACTCCGTACATTCACAAACTGATTCCTTCTTAAACGTCTCCT GTAATTGACAGAACTTAAGTGCAATTAACAAATTCTGTGATTGACGATTT ATTACAAATTTATGCGAAACCATATACAAATAAATTTTTATATATGGCCC AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 12821951..12822778 | 197..1024 | 4140 | 100 | Plus |
chr3R | 27901430 | chr3R | 12823519..12823935 | 1434..1850 | 2085 | 100 | Plus |
chr3R | 27901430 | chr3R | 12822836..12823058 | 1024..1246 | 1115 | 100 | Plus |
chr3R | 27901430 | chr3R | 12823273..12823463 | 1247..1437 | 940 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 12821537..12821660 | 73..196 | 620 | 100 | Plus |
chr3R | 27901430 | chr3R | 12821061..12821134 | 1..74 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 16997465..16998292 | 197..1024 | 4140 | 100 | Plus |
3R | 32079331 | 3R | 16999033..16999450 | 1434..1851 | 2090 | 100 | Plus |
3R | 32079331 | 3R | 16998350..16998572 | 1024..1246 | 1115 | 100 | Plus |
3R | 32079331 | 3R | 16998787..16998977 | 1247..1437 | 955 | 100 | Plus |
3R | 32079331 | 3R | 16997051..16997174 | 73..196 | 620 | 100 | Plus |
3R | 32079331 | 3R | 16996575..16996648 | 1..74 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 16738296..16739123 | 197..1024 | 4140 | 100 | Plus |
3R | 31820162 | 3R | 16739864..16740281 | 1434..1851 | 2090 | 100 | Plus |
3R | 31820162 | 3R | 16739181..16739403 | 1024..1246 | 1115 | 100 | Plus |
3R | 31820162 | 3R | 16739618..16739808 | 1247..1437 | 955 | 100 | Plus |
3R | 31820162 | 3R | 16737882..16738005 | 73..196 | 620 | 100 | Plus |
3R | 31820162 | 3R | 16737406..16737479 | 1..74 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\BuT2 | 2775 | Dbuz\BuT2 BUT2 2775bp | 111..169 | 1844..1787 | 121 | 71.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12821539..12821660 | 75..196 | 100 | -> | Plus |
chr3R | 12821061..12821134 | 1..74 | 100 | -> | Plus |
chr3R | 12821951..12822778 | 197..1024 | 100 | -> | Plus |
chr3R | 12822837..12823058 | 1025..1246 | 100 | -> | Plus |
chr3R | 12823273..12823462 | 1247..1436 | 99 | -> | Plus |
chr3R | 12823522..12823935 | 1437..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3534-RA | 1..1659 | 15..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3534-RA | 1..1659 | 15..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3534-RA | 1..1659 | 15..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3534-RA | 1..1659 | 15..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3534-RA | 1..1659 | 15..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3534-RA | 124..1973 | 1..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3534-RA | 124..1973 | 1..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3534-RA | 130..1979 | 1..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3534-RA | 124..1973 | 1..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3534-RA | 130..1979 | 1..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16996575..16996648 | 1..74 | 100 | -> | Plus |
3R | 16997053..16997174 | 75..196 | 100 | -> | Plus |
3R | 16997465..16998292 | 197..1024 | 100 | -> | Plus |
3R | 16998351..16998572 | 1025..1246 | 100 | -> | Plus |
3R | 16998787..16998976 | 1247..1436 | 100 | -> | Plus |
3R | 16999036..16999449 | 1437..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16996575..16996648 | 1..74 | 100 | -> | Plus |
3R | 16997053..16997174 | 75..196 | 100 | -> | Plus |
3R | 16997465..16998292 | 197..1024 | 100 | -> | Plus |
3R | 16998351..16998572 | 1025..1246 | 100 | -> | Plus |
3R | 16998787..16998976 | 1247..1436 | 100 | -> | Plus |
3R | 16999036..16999449 | 1437..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16996575..16996648 | 1..74 | 100 | -> | Plus |
3R | 16997053..16997174 | 75..196 | 100 | -> | Plus |
3R | 16997465..16998292 | 197..1024 | 100 | -> | Plus |
3R | 16998351..16998572 | 1025..1246 | 100 | -> | Plus |
3R | 16998787..16998976 | 1247..1436 | 100 | -> | Plus |
3R | 16999036..16999449 | 1437..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12822297..12822370 | 1..74 | 100 | -> | Plus |
arm_3R | 12822775..12822896 | 75..196 | 100 | -> | Plus |
arm_3R | 12823187..12824014 | 197..1024 | 100 | -> | Plus |
arm_3R | 12824073..12824294 | 1025..1246 | 100 | -> | Plus |
arm_3R | 12824509..12824698 | 1247..1436 | 100 | -> | Plus |
arm_3R | 12824758..12825171 | 1437..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16737406..16737479 | 1..74 | 100 | -> | Plus |
3R | 16737884..16738005 | 75..196 | 100 | -> | Plus |
3R | 16739182..16739403 | 1025..1246 | 100 | -> | Plus |
3R | 16739618..16739807 | 1247..1436 | 100 | -> | Plus |
3R | 16738296..16739123 | 197..1024 | 100 | -> | Plus |
3R | 16739867..16740280 | 1437..1850 | 100 | Plus |
Translation from 2 to 1672
> LD23605.hyp SSLNMGPPKQLKRTFLGFDLSTQKLKAVLLGSSLEVVAAAEVKFDTDLPE FRTTGGANAGSIKNEYFVQPVMWVKAMDIVLDRLVMQQADLSTVAAISGS GQQHGSLYWSKHGINTLQNLDSEKFLHAQIDDSAFVVNRTPIWMDATTTK QCLEMEMAVGGKLNMVELTGSKCYERFTGPQIRKIYQQRCHAYEEANRIS LVSSFISSLFLGSVAPIDFSDGSGMNLLDIRKKNWSKECLNVCAPDLDKR LDIPVSPNSILGNVSPYFVERFSFSPDCKVAASTGDNPSALSGMLVGSSW LTISMGTSDTLMMSLKEPLNWEEGHILCHPTETEEFMGLLCFRNASLVRE EMNKKTTGGDWDKFNEYLDSTPRGNFGNMAVHFNDMEIIPKAQGILRWNR EMDPSSPDAARGVIKFSSPQIEIRALVEGQMLHHRAVAEDLGYKFGPETQ ILVTGGASVNKSILQTIADVFNAPVHIQDEGFEAALLGAAYRSAYALYLQ EAGDGVTPLCYRDYILSLTSNKLSLVCEPHKDSEEIYAPMLQRYREMARV LSNPNT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3534-PA | 552 | CG3534-PA | 1..552 | 5..556 | 2876 | 100 | Plus |
CG3544-PB | 572 | CG3544-PB | 13..564 | 14..556 | 1335 | 45.7 | Plus |
CG3544-PA | 572 | CG3544-PA | 13..564 | 14..556 | 1335 | 45.7 | Plus |
Translation from 14 to 1672
> LD23605.pep MGPPKQLKRTFLGFDLSTQKLKAVLLGSSLEVVAAAEVKFDTDLPEFRTT GGANAGSIKNEYFVQPVMWVKAMDIVLDRLVMQQADLSTVAAISGSGQQH GSLYWSKHGINTLQNLDSEKFLHAQIDDSAFVVNRTPIWMDATTTKQCLE MEMAVGGKLNMVELTGSKCYERFTGPQIRKIYQQRCHAYEEANRISLVSS FISSLFLGSVAPIDFSDGSGMNLLDIRKKNWSKECLNVCAPDLDKRLDIP VSPNSILGNVSPYFVERFSFSPDCKVAASTGDNPSALSGMLVGSSWLTIS MGTSDTLMMSLKEPLNWEEGHILCHPTETEEFMGLLCFRNASLVREEMNK KTTGGDWDKFNEYLDSTPRGNFGNMAVHFNDMEIIPKAQGILRWNREMDP SSPDAARGVIKFSSPQIEIRALVEGQMLHHRAVAEDLGYKFGPETQILVT GGASVNKSILQTIADVFNAPVHIQDEGFEAALLGAAYRSAYALYLQEAGD GVTPLCYRDYILSLTSNKLSLVCEPHKDSEEIYAPMLQRYREMARVLSNP NT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17074-PA | 549 | GF17074-PA | 3..538 | 4..548 | 2311 | 77.4 | Plus |
Dana\GF15035-PA | 569 | GF15035-PA | 27..559 | 24..549 | 1249 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21873-PA | 552 | GG21873-PA | 1..552 | 1..552 | 2848 | 94.4 | Plus |
Dere\GG24744-PA | 571 | GG24744-PA | 13..560 | 10..548 | 1382 | 46.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19552-PA | 550 | GH19552-PA | 12..547 | 11..547 | 2166 | 75.2 | Plus |
Dgri\GH25221-PA | 458 | GH25221-PA | 1..454 | 21..474 | 1932 | 76.4 | Plus |
Dgri\GH11241-PA | 568 | GH11241-PA | 13..563 | 10..552 | 1101 | 39.5 | Plus |
Dgri\GH23245-PA | 479 | GH23245-PA | 13..315 | 10..313 | 621 | 39.5 | Plus |
Dgri\GH23245-PA | 479 | GH23245-PA | 337..476 | 422..552 | 242 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3534-PA | 552 | CG3534-PA | 1..552 | 1..552 | 2876 | 100 | Plus |
CG3544-PB | 572 | CG3544-PB | 13..564 | 10..552 | 1335 | 45.7 | Plus |
CG3544-PA | 572 | CG3544-PA | 13..564 | 10..552 | 1335 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23848-PA | 553 | GI23848-PA | 9..547 | 8..547 | 2160 | 75.2 | Plus |
Dmoj\GI21838-PA | 580 | GI21838-PA | 5..560 | 2..548 | 1022 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24542-PA | 550 | GL24542-PA | 1..547 | 1..549 | 2334 | 77 | Plus |
Dper\GL15293-PA | 574 | GL15293-PA | 15..561 | 10..548 | 1215 | 44 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17507-PA | 550 | GA17507-PA | 1..547 | 1..549 | 2329 | 76.9 | Plus |
Dpse\GA17513-PA | 574 | GA17513-PA | 15..561 | 10..548 | 1241 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15194-PA | 552 | GM15194-PA | 1..552 | 1..552 | 2911 | 97.5 | Plus |
Dsec\GM16766-PA | 572 | GM16766-PA | 13..564 | 10..552 | 1368 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19126-PA | 405 | GD19126-PA | 1..397 | 1..397 | 2101 | 97.7 | Plus |
Dsim\GD23045-PA | 572 | GD23045-PA | 13..564 | 10..552 | 1378 | 45.3 | Plus |
Dsim\GD15162-PA | 184 | GD15162-PA | 1..184 | 369..552 | 823 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10562-PA | 553 | GJ10562-PA | 9..547 | 8..547 | 2169 | 75.4 | Plus |
Dvir\GJ17792-PA | 580 | GJ17792-PA | 13..559 | 10..548 | 1197 | 42.9 | Plus |