BDGP Sequence Production Resources |
Search the DGRC for LD23619
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 236 |
Well: | 19 |
Vector: | pOT2 |
Associated Gene/Transcript | Ude-RB |
Protein status: | LD23619.pep: gold |
Preliminary Size: | 1473 |
Sequenced Size: | 1493 |
Gene | Date | Evidence |
---|---|---|
CG18410 | 2001-01-01 | Release 2 assignment |
CG18410 | 2001-07-04 | Blastp of sequenced clone |
CG18410 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18410 | 2008-04-29 | Release 5.5 accounting |
CG18410 | 2008-08-15 | Release 5.9 accounting |
CG18410 | 2008-12-18 | 5.12 accounting |
1493 bp (1493 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051686
> LD23619.complete CTCTGATCAGTGCCTCTCAGTGGTGCTCATTTTGCGTCTTCCTCCCATGA TTAAGTGCCATATGCCGTCGAGTTGGAGACGGCTACGCAAAATCAGTCGT ATTCTAGCGCTGACAGGAAGCAGACAGATACTCACCCAAGTATTAGCAAC CAAAGGAGCAGCAATGGCAGAGGGAGATTCGAAATTTGGCTTCAAGGACA TGGAGAAGGCGTTAGAGACGTTGAAGCTGCTGGAGAGTCACGACATGCAG TATCGCAAGCTGACGGTGCGCGGTTTGCTTGGCCGGGCCAAAAGAGTCCT GACAATGACCAAGGCGGAGGAGAAGCTGAAGAACATCAATGCGGCCATTG GAGTCTTTGAAAAGTGGCTGGAGGAGAATGGCGGAGGGGCGTCCAGCAAG AATGCCAAGACAGAGAGCGAGGACAAGGTGGAGACGGTGCCGGGATTGGG ATTCAAGGACAAGGCTGCTGCGGAGGCAACGCTGAGCATTTTGGCGGAAC GAGATCCGGACTACCAGAGGTTGGCCATCAAGGGATTGATTGGCAGCTCC AAGCGTGTCCTGTCAGGCACCAAGAACGAGGACAAGATCACGGCCATAAA GGAGGGAGTCCAGGTACTTGAGGATTTCCTCGAAAAGTTCGAGGCCGAGA ATCGTATCAAGGACAATCGAGCATACTTGCCACTCGCCGTGGTCACCAAA CTGCCCGATCCCAAAGATGAGTTGGCTAAGGAGTTTCTCGAAGCCTATGG CGGCTCCAAGGCCAAGGGTAACTACAAGCACCTGCGCACAATGTTCCCCA AAACGGATGAAAAGACCAGCTGGGATATTGTGCGCAATCGTCAGCTGTCC AAGTTGCTGGAGCAGATTAAGAGTGAGGAGGCCAAGCTCTTCGATGCAGA GACCGGAGCACCCACCGACCTGCACCTGCAGTTGATCCACTGGGCATACA GTCCGCAGCCGGACAAGCTGAAGCAGTACATCGAAAAGCTGGCCAAGAAG ACGCCCGAAAAGCGCAAGCAGGAGAGCAGCAGCAGTGCCAGCGATTCCAG TGCCACCAGCCAGGATTCCGATGGCGAGGATAAGCCCAAAAGGAAGAAGA AGAGGGAGGAGTGAGGTCTAAACAATCAAAAACACTCTGTTGCCATTTAT TAACGAACAGAAACGGTTCAAACAGCTCTGTTTCCGGTTTCTCCAACCGA TGCAATTTGGTGGACTTTAGATTTAACAATTTTTTTTTTAAATATTACCT TATTGAACTGAAGTTTCATGGTTTCCTAATCTGCCAGATTGCACGGTCTT CGAAATCGAAAACTGGCTAAATAGTTTATTTAAGTAACTCAACCTCAATG CAGAACTACGATATTTGGTGGACACATGGCTGCTTTCCTCTGTAACCCCC TCTATGTACACAGATAGATACATATATATGTATACATAAGCGCTCAAGTA TATATTCTATATGTTAATATTGTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18410-RA | 1706 | CG18410-RA | 76..1551 | 1..1476 | 7380 | 100 | Plus |
Ets96B-RA | 2631 | Ets96B-RA | 2267..2631 | 1476..1112 | 1825 | 100 | Minus |
Ets96B.a | 2805 | Ets96B.a | 2441..2805 | 1476..1112 | 1825 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20620799..20621787 | 1473..485 | 4930 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 20622580..20622882 | 305..3 | 1455 | 98.7 | Minus |
chr3R | 27901430 | chr3R | 20622352..20622523 | 477..306 | 860 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24797592..24798583 | 1476..485 | 4960 | 100 | Minus |
3R | 32079331 | 3R | 24799364..24799668 | 305..1 | 1525 | 100 | Minus |
3R | 32079331 | 3R | 24799127..24799307 | 486..306 | 905 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24538423..24539414 | 1476..485 | 4960 | 100 | Minus |
3R | 31820162 | 3R | 24540195..24540499 | 305..1 | 1525 | 100 | Minus |
3R | 31820162 | 3R | 24539958..24540138 | 486..306 | 905 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Kepler | 722 | Dbuz\Kepler KEPLER 722bp | 417..482 | 1408..1472 | 129 | 68.2 | Plus |
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 3652..3822 | 998..833 | 123 | 58.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20622580..20622884 | 1..305 | 98 | Minus | |
chr3R | 20622342..20622523 | 306..486 | 97 | <- | Minus |
chr3R | 20620799..20621785 | 487..1473 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18410-RA | 1..1068 | 47..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18410-RA | 1..1068 | 47..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ude-RB | 1..951 | 164..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18410-RA | 1..1068 | 47..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ude-RB | 1..951 | 164..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18410-RA | 1..1473 | 1..1473 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18410-RA | 1..1473 | 1..1473 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ude-RC | 1..1473 | 1..1473 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18410-RA | 1..1473 | 1..1473 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ude-RC | 1..1473 | 1..1473 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24797595..24798581 | 487..1473 | 100 | <- | Minus |
3R | 24799127..24799307 | 306..486 | 100 | <- | Minus |
3R | 24799364..24799668 | 1..305 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24797595..24798581 | 487..1473 | 100 | <- | Minus |
3R | 24799127..24799307 | 306..486 | 100 | <- | Minus |
3R | 24799364..24799668 | 1..305 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24797595..24798581 | 487..1473 | 100 | <- | Minus |
3R | 24799127..24799307 | 306..486 | 100 | <- | Minus |
3R | 24799364..24799668 | 1..305 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20623317..20624303 | 487..1473 | 100 | <- | Minus |
arm_3R | 20624849..20625029 | 306..486 | 100 | <- | Minus |
arm_3R | 20625086..20625390 | 1..305 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24539958..24540138 | 306..486 | 100 | <- | Minus |
3R | 24538426..24539412 | 487..1473 | 100 | <- | Minus |
3R | 24540195..24540499 | 1..305 | 100 | Minus |
Translation from 0 to 1113
> LD23619.hyp SDQCLSVVLILRLPPMIKCHMPSSWRRLRKISRILALTGSRQILTQVLAT KGAAMAEGDSKFGFKDMEKALETLKLLESHDMQYRKLTVRGLLGRAKRVL TMTKAEEKLKNINAAIGVFEKWLEENGGGASSKNAKTESEDKVETVPGLG FKDKAAAEATLSILAERDPDYQRLAIKGLIGSSKRVLSGTKNEDKITAIK EGVQVLEDFLEKFEAENRIKDNRAYLPLAVVTKLPDPKDELAKEFLEAYG GSKAKGNYKHLRTMFPKTDEKTSWDIVRNRQLSKLLEQIKSEEAKLFDAE TGAPTDLHLQLIHWAYSPQPDKLKQYIEKLAKKTPEKRKQESSSSASDSS ATSQDSDGEDKPKRKKKREE*
Translation from 46 to 1113
> LD23619.pep MIKCHMPSSWRRLRKISRILALTGSRQILTQVLATKGAAMAEGDSKFGFK DMEKALETLKLLESHDMQYRKLTVRGLLGRAKRVLTMTKAEEKLKNINAA IGVFEKWLEENGGGASSKNAKTESEDKVETVPGLGFKDKAAAEATLSILA ERDPDYQRLAIKGLIGSSKRVLSGTKNEDKITAIKEGVQVLEDFLEKFEA ENRIKDNRAYLPLAVVTKLPDPKDELAKEFLEAYGGSKAKGNYKHLRTMF PKTDEKTSWDIVRNRQLSKLLEQIKSEEAKLFDAETGAPTDLHLQLIHWA YSPQPDKLKQYIEKLAKKTPEKRKQESSSSASDSSATSQDSDGEDKPKRK KKREE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23181-PA | 316 | GF23181-PA | 1..316 | 40..355 | 1425 | 88.6 | Plus |
Dana\GF13963-PA | 91 | GF13963-PA | 6..83 | 7..69 | 186 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12323-PA | 316 | GG12323-PA | 1..316 | 40..355 | 1606 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18464-PA | 316 | GH18464-PA | 1..287 | 40..326 | 1310 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ude-PD | 316 | CG18410-PD | 1..316 | 40..355 | 1597 | 100 | Plus |
Ude-PC | 316 | CG18410-PC | 1..316 | 40..355 | 1597 | 100 | Plus |
Ude-PB | 316 | CG18410-PB | 1..316 | 40..355 | 1597 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24043-PA | 315 | GI24043-PA | 1..315 | 40..355 | 1274 | 78.8 | Plus |
Dmoj\GI24043-PA | 315 | GI24043-PA | 81..157 | 39..109 | 150 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13863-PA | 345 | GL13863-PA | 9..314 | 20..326 | 1376 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14925-PA | 316 | GA14925-PA | 1..287 | 40..326 | 1348 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23464-PA | 316 | GM23464-PA | 1..316 | 40..355 | 1601 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18271-PA | 315 | GD18271-PA | 1..303 | 40..343 | 1332 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23671-PA | 436 | GJ23671-PA | 98..404 | 18..324 | 1313 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13169-PA | 319 | GK13169-PA | 1..286 | 40..325 | 1322 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10776-PA | 316 | GE10776-PA | 1..316 | 40..355 | 1606 | 97.2 | Plus |