BDGP Sequence Production Resources |
Search the DGRC for LD23656
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 236 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | Sin1-RA |
Protein status: | LD23656.pep: gold |
Preliminary Size: | 2033 |
Sequenced Size: | 2014 |
Gene | Date | Evidence |
---|---|---|
CG10105 | 2001-01-01 | Release 2 assignment |
CG10105 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10105 | 2003-01-14 | Blastp of sequenced clone |
Sin1 | 2008-04-29 | Release 5.5 accounting |
Sin1 | 2008-08-15 | Release 5.9 accounting |
Sin1 | 2008-12-18 | 5.12 accounting |
2014 bp (2014 high quality bases) assembled on 2003-01-14
GenBank Submission: BT003261
> LD23656.complete ATAGAAATTAATTTTGAAAAAGAGATTTTCTTTTGTTTACTACCATGGCG ACCTACTCCAACCAGCATTGGCTGCTCTCCCACATCCGCAACTCCTTCAT ATCCACGGACGACACCGGAATGTGCGAGACGGTGATGCTGAGCGATGACA TGCCCAAACACTATTTGCGAAAATTCGGTAACTCGGGCGCTGGAGGAGAT CACTATCATTGGCGACGGGCGCACAAGACACCGCCGACGGGGGGCGGGAC AACACCGGAGCGGAACACCCGGCATCCGGATGCGCCACTCCAGGAAGTGG ACTTCATCTGCTATCCGGGACTGGACCTCAGCGACGACGAGGAGGACATG TCCACGCACTCCTTTGACATCCAAATGTATCCGGAGGTGGGCGCCCACCG CTTTCGCTCCAACACTGCCCAAAAACTAGAGAAACTGGATATTGCCAAGC GAAGGGCGGCGCGCATCAAGAGTGTTAACTACCAGGAGGAAGTGCAGCCA CCGGAGAGCGATGATTTCTTTAAACGCAAAGAGTTGCCCCTCAGCAAAGC TGAGCGAGTTAAAAATGAACCGAAAGCCAACGACGATGATCTGTCAGATG AGGGTGTTCAGAGCCAGCTCACTGAACAGTTGGCCAAAAGTCCAAAGCAA GCACAGAATCGCTTCATTGAATTCGCCCGCTTCGATGGCACCTCCCAAGT GGGTATGCAAACGAAACGGATAAACGTGTTTTTAAATATGCTTCCCGAGC CGGATCGCAACTACCCGTTGAAGATCTGCGTCGTAGCCACTGCCAAAATC CAGGAGGTAATTGGTTTTGTCTGCTACAGGACCTCCTTACAATATCCCGA CGTTCCTTTGAAGTCCCTGCAGCATTACGCTTTGTATATGACAGAGGATA ATGATGATATGGAAGACTTCCCACCGTTGGACAATCGCGAACCCTGCTCT AAGTTTGGCTTCTCCCAACTGACCCTCGCAGAGCGTCGGCCATTGGCTCC AGTGACGCGAGTTGATTACCACAGCCAGCTGGGCAGTAAATCCATGACTT CCGTGGAAGACAAGACAGCTCTGTCCGATGCGGCTGTCAAGGCTCTGCAA AATATTAGCCTAAATGGAGGAACTAGTGATCCGGGTGGAGGAGGTGGAGG AGGCGATAGTCCACACGATAATGTCAAGGAGTATGAGAAGCGATTGTTGA ATCACAACGATATGCTGGAAGCACCCATGCATCGTACTTTCCGCCTCAAC ATCATCGACAAGAGGTTCTTCAAATCCGATGTGACTCTGGGAATATCTGG TGAGAGAATAGAGATCGATCAGTGCAAGAATGCCAAGTTCTGGCCGCAGA AGAAGCCCGTATCCACTCCCATTGACTTTGTTGCTCACTGCGAGATTTTG GAGCGACGCCACCTGAAGGCTCTGTTGCGCATCTGGCTGAAGTCAAACTC CTCGTCCCCTTCCTTCTCCACGGGCTGCACTTCGGCGCCGATCAACGCCA GCGTAACCACACTGAATGCGGGAAGCGGCAGTGGTGGGATTGCCCACTCG CCCAGCAGTCCGGGTCACTCTTCCGGACTCTTTTCAAGCAGCAATATTCG CTTTAAGCACTACGACTTCGATACGGACACCCACACGGCGGAGCAGATCC ACAACAAGCTGAACTGCATACTAGAGATGCGATCCAGCGATCTGAGGCGC GAGTTCCTTTTGCAGCGCGATCGGAAGCAGGAGAAGAGGCAGCTGAAGTT GTAGTATTTATTCCTATGGCAGCGGCTGTCGCTCGTTTGCCTAGCAGGCG GGCAACTGTCCTGCCGCTGCAACGTCCCCGCCTACTTCTCCGCCTCCGCC TCCGCCTCCTGTTCGATAAGTTGTATTAGTTGCTAACTAAAGATTGTGTT ACACATGTTTGCCTAGCCTGTAAGTATTTATTGAACTCACCCAACTACGA AGCCTGGTCCTGAAAATAAAATTGCAAAATTTACACTTAAAAAAAAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sin1-RA | 2026 | Sin1-RA | 29..2021 | 1..1992 | 9925 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10299171..10301159 | 1..1988 | 9895 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14411863..14413855 | 1..1992 | 9915 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14413062..14415054 | 1..1992 | 9925 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10299171..10301159 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin1-RA | 1..1710 | 45..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin1-RA | 1..1710 | 45..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin1-RA | 1..1710 | 45..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin1-RA | 1..1710 | 45..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin1-RA | 1..1710 | 45..1754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin1-RA | 29..2017 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin1-RA | 53..2041 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin1-RA | 39..2027 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin1-RA | 29..2017 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sin1-RA | 39..2027 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14411863..14413851 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14411863..14413851 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14411863..14413851 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10299368..10301356 | 1..1988 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14413062..14415050 | 1..1988 | 99 | Plus |
Translation from 44 to 1753
> LD23656.pep MATYSNQHWLLSHIRNSFISTDDTGMCETVMLSDDMPKHYLRKFGNSGAG GDHYHWRRAHKTPPTGGGTTPERNTRHPDAPLQEVDFICYPGLDLSDDEE DMSTHSFDIQMYPEVGAHRFRSNTAQKLEKLDIAKRRAARIKSVNYQEEV QPPESDDFFKRKELPLSKAERVKNEPKANDDDLSDEGVQSQLTEQLAKSP KQAQNRFIEFARFDGTSQVGMQTKRINVFLNMLPEPDRNYPLKICVVATA KIQEVIGFVCYRTSLQYPDVPLKSLQHYALYMTEDNDDMEDFPPLDNREP CSKFGFSQLTLAERRPLAPVTRVDYHSQLGSKSMTSVEDKTALSDAAVKA LQNISLNGGTSDPGGGGGGGDSPHDNVKEYEKRLLNHNDMLEAPMHRTFR LNIIDKRFFKSDVTLGISGERIEIDQCKNAKFWPQKKPVSTPIDFVAHCE ILERRHLKALLRIWLKSNSSSPSFSTGCTSAPINASVTTLNAGSGSGGIA HSPSSPGHSSGLFSSSNIRFKHYDFDTDTHTAEQIHNKLNCILEMRSSDL RREFLLQRDRKQEKRQLKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13505-PA | 579 | GF13505-PA | 1..579 | 1..569 | 2422 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20456-PA | 569 | GG20456-PA | 1..569 | 1..569 | 2768 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19748-PA | 601 | GH19748-PA | 1..601 | 1..569 | 2024 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sin1-PA | 569 | CG10105-PA | 1..569 | 1..569 | 3011 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20284-PA | 603 | GI20284-PA | 1..603 | 1..569 | 1968 | 66.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10693-PA | 578 | GL10693-PA | 1..573 | 1..568 | 2457 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10075-PA | 578 | GA10075-PA | 1..573 | 1..568 | 2455 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21545-PA | 571 | GM21545-PA | 1..571 | 1..569 | 3000 | 97.2 | Plus |
Dsec\GM15129-PA | 186 | GM15129-PA | 48..186 | 426..569 | 536 | 84 | Plus |
Dsec\GM21543-PA | 186 | GM21543-PA | 58..186 | 441..569 | 530 | 93 | Plus |
Dsec\GM11657-PA | 186 | GM11657-PA | 48..186 | 426..569 | 530 | 84.7 | Plus |
Dsec\GM10067-PA | 186 | GM10067-PA | 48..186 | 426..569 | 530 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11053-PA | 571 | GD11053-PA | 1..571 | 1..569 | 3003 | 97.4 | Plus |
Dsim\GD11052-PA | 102 | GD11052-PA | 1..36 | 1..36 | 178 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22011-PA | 608 | GJ22011-PA | 1..608 | 1..569 | 2137 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21478-PA | 591 | GK21478-PA | 1..590 | 1..568 | 2102 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13587-PA | 571 | GE13587-PA | 1..571 | 1..569 | 2854 | 95.3 | Plus |
Translation from 44 to 1753
> LD23656.hyp MATYSNQHWLLSHIRNSFISTDDTGMCETVMLSDDMPKHYLRKFGNSGAG GDHYHWRRAHKTPPTGGGTTPERNTRHPDAPLQEVDFICYPGLDLSDDEE DMSTHSFDIQMYPEVGAHRFRSNTAQKLEKLDIAKRRAARIKSVNYQEEV QPPESDDFFKRKELPLSKAERVKNEPKANDDDLSDEGVQSQLTEQLAKSP KQAQNRFIEFARFDGTSQVGMQTKRINVFLNMLPEPDRNYPLKICVVATA KIQEVIGFVCYRTSLQYPDVPLKSLQHYALYMTEDNDDMEDFPPLDNREP CSKFGFSQLTLAERRPLAPVTRVDYHSQLGSKSMTSVEDKTALSDAAVKA LQNISLNGGTSDPGGGGGGGDSPHDNVKEYEKRLLNHNDMLEAPMHRTFR LNIIDKRFFKSDVTLGISGERIEIDQCKNAKFWPQKKPVSTPIDFVAHCE ILERRHLKALLRIWLKSNSSSPSFSTGCTSAPINASVTTLNAGSGSGGIA HSPSSPGHSSGLFSSSNIRFKHYDFDTDTHTAEQIHNKLNCILEMRSSDL RREFLLQRDRKQEKRQLKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sin1-PA | 569 | CG10105-PA | 1..569 | 1..569 | 3011 | 100 | Plus |