BDGP Sequence Production Resources |
Search the DGRC for LD23667
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 236 |
Well: | 67 |
Vector: | pOT2 |
Associated Gene/Transcript | Syx7-RA |
Protein status: | LD23667.pep: gold |
Preliminary Size: | 1679 |
Sequenced Size: | 1590 |
Gene | Date | Evidence |
---|---|---|
CG5081 | 2001-01-01 | Release 2 assignment |
CG5081 | 2001-11-09 | Blastp of sequenced clone |
CG5081 | 2003-01-01 | Sim4 clustering to Release 3 |
Syx7 | 2008-04-29 | Release 5.5 accounting |
Syx7 | 2008-08-15 | Release 5.9 accounting |
Syx7 | 2008-12-18 | 5.12 accounting |
1590 bp (1590 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069516
> LD23667.complete TAAAAACCTAGCTAAAATTTCAGTTTTGCGAACATTCCGCCTACTTAAAT CAACAAATTTCAGATTGCGAAACGCGTAAAAAGTGCGAAGGAAATGCTCT AAGATCAAGGTCACCGGCGAAGGTCACCAACGACAGCTAGGGCAACCACA AAAGGAACAACTTGTCTCCAGCGATAACTCGAAGGTCATCAAAGTGTCTG CCTACGAAAGCATGGACTTACAGCATATGGAGAATGGTCTAAGCGGCGGG GGAGGAGGTGGCCTAAGCGAAATAGATTTCCAAAGGCTGGCCCAGATTAT AGCCACCAGCATCCAGAAGGTGCAGCAGAATGTGTCCACGATGCAGCGCA TGGTCAATCAACTGAACACGCCCCAAGATTCTCCGGAGCTCAAGAAGCAG CTCCACCAAATAATGACCTACACCAACCAGCTGGTGACCGACACAAACAA TCAAATCAACGAGGTGGACAAGTGCAAGGAGCGCCACCTGAAGATCCAGC GGGATAGGCTCGTGGACGAGTTCACGGCGGCACTGACCGCCTTCCAGTCT GTTCAGCGCAAGACGGCGGACATAGAGAAGACGGCGTTGCGGCAGGCGCG CGGAGATAGCTACAACATCGCCCGTCCACCCGGCTCATCGCGTACCGGCA GCTCCAACAGTAGCGCCAGCCAGCAGGACAACAACTCCTTCTTCGAGGAC AACTTCTTCAATCGCAAATCAAACCAGCAACAGATGCAGACTCAGATGGA GGAGCAGGCGGACCTGCAGGCCCTCGAGGAACAGGAGCAGGTCATACGGG AGTTGGAGAACAACATCGTGGGCGTGAACGAGATATACAAGAAGCTTGGC GCCCTGGTCTACGAGCAGGGACTGACGGTGGACTCCATCGAGTCGCAGGT GGAACAGACTAGCATTTTTGTCTCGCAGGGCACGGAAAATCTGCGCAAGG CGAGCTCTTACAGGAACAAAGTGCGCAAGAAGAAGCTTATTTTGGTGGGC ATCCTGAGCGCCGTGCTGCTGGCCATCATCTTGATACTCGTTTTTCAGTT CAAGAATTAGAGCCTTCCGGCATCTCCGAATGATTCAAACCAAACTAGTA AATTGTTGTGAAAAGACAAGAGTTGCCGCATGCAGGCCCCTAAACCCCGT AATTCCCCACCCAATCCTTTGGACCTTAGGCGAGATTATGGCTTTAATCC TTAATCCAACTTCCAATACTGGCTGAAATCGAAAACTGCGACTCGTAGAC GAAGATATAGTGTTTTGAGGAGTATTCACCGGCACGTGCATCTGTTATAT TTGCTTTAAAAACAATTTTATATTTTATGTGTACTACTTTTATTATTACG CACCCTGTATATTGATTATTAGTATTGATTAACAACTGTTGGCTTCAAAT TCTAATTATGTTCCGAAACTCATTCGCCAGCGCTTTGTATTGTATTGTAT TGTATTTAGAGTTAAGAGGCAGAGGAAGCCATATATGCGATGGCATACAC ACATGTACGAAAAATGAAATAATAAACATGAAAATCGAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Syx7.d | 1746 | Syx7.d | 355..1740 | 153..1538 | 6930 | 100 | Plus |
Syx7-RB | 1629 | Syx7-RB | 238..1623 | 153..1538 | 6930 | 100 | Plus |
Syx7.b | 1648 | Syx7.b | 436..1642 | 332..1538 | 6035 | 100 | Plus |
Syx7.b | 1648 | Syx7.b | 238..417 | 153..332 | 900 | 100 | Plus |
Syx7.d | 1746 | Syx7.d | 29..183 | 1..155 | 775 | 100 | Plus |
Syx7.b | 1648 | Syx7.b | 49..202 | 1..154 | 770 | 100 | Plus |
Syx7-RB | 1629 | Syx7-RB | 49..202 | 1..154 | 770 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21436515..21437088 | 964..1537 | 2855 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 21436039..21436457 | 546..964 | 2095 | 100 | Plus |
chr3L | 24539361 | chr3L | 21435156..21435335 | 153..332 | 900 | 100 | Plus |
chr3L | 24539361 | chr3L | 21434830..21434984 | 1..155 | 775 | 100 | Plus |
chr3L | 24539361 | chr3L | 21435823..21435967 | 403..547 | 725 | 100 | Plus |
chr3L | 24539361 | chr3L | 21435402..21435472 | 332..402 | 355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21447555..21448129 | 964..1538 | 2875 | 100 | Plus |
3L | 28110227 | 3L | 21447079..21447497 | 546..964 | 2095 | 100 | Plus |
3L | 28110227 | 3L | 21446196..21446375 | 153..332 | 900 | 100 | Plus |
3L | 28110227 | 3L | 21445870..21446024 | 1..155 | 775 | 100 | Plus |
3L | 28110227 | 3L | 21446863..21447007 | 403..547 | 725 | 100 | Plus |
3L | 28110227 | 3L | 21446442..21446512 | 332..402 | 355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21440655..21441229 | 964..1538 | 2875 | 100 | Plus |
3L | 28103327 | 3L | 21440179..21440597 | 546..964 | 2095 | 100 | Plus |
3L | 28103327 | 3L | 21439296..21439475 | 153..332 | 900 | 100 | Plus |
3L | 28103327 | 3L | 21438970..21439124 | 1..155 | 775 | 100 | Plus |
3L | 28103327 | 3L | 21439963..21440107 | 403..547 | 725 | 100 | Plus |
3L | 28103327 | 3L | 21439542..21439612 | 332..402 | 355 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Damb\P-element_T | 3329 | Damb\P-element_T P_T 3329bp Derived from AF012414. | 2570..2638 | 1308..1371 | 116 | 69.6 | Plus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 899..1018 | 1411..1291 | 116 | 56.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21434830..21434983 | 1..154 | 100 | -> | Plus |
chr3L | 21435158..21435335 | 155..332 | 100 | -> | Plus |
chr3L | 21435403..21435472 | 333..402 | 100 | -> | Plus |
chr3L | 21435823..21435967 | 403..547 | 100 | -> | Plus |
chr3L | 21436041..21436457 | 548..964 | 100 | -> | Plus |
chr3L | 21436516..21437088 | 965..1537 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx7-RB | 1..849 | 212..1060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx7-RB | 1..849 | 212..1060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx7-RA | 1..849 | 212..1060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx7-RB | 1..849 | 212..1060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx7-RA | 1..849 | 212..1060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx7-RA | 49..1585 | 1..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx7-RA | 49..1585 | 1..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx7-RA | 37..1573 | 1..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx7-RA | 49..1585 | 1..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx7-RA | 37..1573 | 1..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21445870..21446023 | 1..154 | 100 | -> | Plus |
3L | 21446198..21446375 | 155..332 | 100 | -> | Plus |
3L | 21446443..21446512 | 333..402 | 100 | -> | Plus |
3L | 21446863..21447007 | 403..547 | 100 | -> | Plus |
3L | 21447081..21447497 | 548..964 | 100 | -> | Plus |
3L | 21447556..21448128 | 965..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21445870..21446023 | 1..154 | 100 | -> | Plus |
3L | 21446198..21446375 | 155..332 | 100 | -> | Plus |
3L | 21446443..21446512 | 333..402 | 100 | -> | Plus |
3L | 21446863..21447007 | 403..547 | 100 | -> | Plus |
3L | 21447081..21447497 | 548..964 | 100 | -> | Plus |
3L | 21447556..21448128 | 965..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21445870..21446023 | 1..154 | 100 | -> | Plus |
3L | 21446198..21446375 | 155..332 | 100 | -> | Plus |
3L | 21446443..21446512 | 333..402 | 100 | -> | Plus |
3L | 21446863..21447007 | 403..547 | 100 | -> | Plus |
3L | 21447081..21447497 | 548..964 | 100 | -> | Plus |
3L | 21447556..21448128 | 965..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21439298..21439475 | 155..332 | 100 | -> | Plus |
arm_3L | 21439543..21439612 | 333..402 | 100 | -> | Plus |
arm_3L | 21439963..21440107 | 403..547 | 100 | -> | Plus |
arm_3L | 21438970..21439123 | 1..154 | 100 | -> | Plus |
arm_3L | 21440181..21440597 | 548..964 | 100 | -> | Plus |
arm_3L | 21440656..21441228 | 965..1537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21440181..21440597 | 548..964 | 100 | -> | Plus |
3L | 21440656..21441228 | 965..1537 | 100 | Plus | |
3L | 21438970..21439123 | 1..154 | 100 | -> | Plus |
3L | 21439298..21439475 | 155..332 | 100 | -> | Plus |
3L | 21439543..21439612 | 333..402 | 100 | -> | Plus |
3L | 21439963..21440107 | 403..547 | 100 | -> | Plus |
Translation from 211 to 1059
> LD23667.hyp MDLQHMENGLSGGGGGGLSEIDFQRLAQIIATSIQKVQQNVSTMQRMVNQ LNTPQDSPELKKQLHQIMTYTNQLVTDTNNQINEVDKCKERHLKIQRDRL VDEFTAALTAFQSVQRKTADIEKTALRQARGDSYNIARPPGSSRTGSSNS SASQQDNNSFFEDNFFNRKSNQQQMQTQMEEQADLQALEEQEQVIRELEN NIVGVNEIYKKLGALVYEQGLTVDSIESQVEQTSIFVSQGTENLRKASSY RNKVRKKKLILVGILSAVLLAIILILVFQFKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Syx7-PB | 282 | CG5081-PB | 1..282 | 1..282 | 1398 | 100 | Plus |
Syx7-PA | 282 | CG5081-PA | 1..282 | 1..282 | 1398 | 100 | Plus |
Syx13-PB | 284 | CG11278-PB | 35..274 | 11..274 | 271 | 25.8 | Plus |
Syx13-PA | 284 | CG11278-PA | 35..274 | 11..274 | 271 | 25.8 | Plus |
Syx16-PA | 352 | CG1467-PA | 206..348 | 132..277 | 191 | 34.2 | Plus |
Translation from 211 to 1059
> LD23667.pep MDLQHMENGLSGGGGGGLSEIDFQRLAQIIATSIQKVQQNVSTMQRMVNQ LNTPQDSPELKKQLHQIMTYTNQLVTDTNNQINEVDKCKERHLKIQRDRL VDEFTAALTAFQSVQRKTADIEKTALRQARGDSYNIARPPGSSRTGSSNS SASQQDNNSFFEDNFFNRKSNQQQMQTQMEEQADLQALEEQEQVIRELEN NIVGVNEIYKKLGALVYEQGLTVDSIESQVEQTSIFVSQGTENLRKASSY RNKVRKKKLILVGILSAVLLAIILILVFQFKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10875-PA | 287 | GF10875-PA | 1..287 | 1..282 | 1193 | 94.1 | Plus |
Dana\GF24028-PA | 281 | GF24028-PA | 33..279 | 11..280 | 240 | 26.4 | Plus |
Dana\GF20436-PA | 356 | GF20436-PA | 236..341 | 163..268 | 149 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16188-PA | 283 | GG16188-PA | 1..283 | 1..282 | 1448 | 98.2 | Plus |
Dere\GG15624-PA | 285 | GG15624-PA | 36..282 | 11..281 | 228 | 27.3 | Plus |
Dere\GG17995-PA | 349 | GG17995-PA | 203..332 | 132..262 | 163 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16098-PA | 285 | GH16098-PA | 1..285 | 1..282 | 1166 | 84.6 | Plus |
Dgri\GH17144-PA | 280 | GH17144-PA | 34..279 | 11..280 | 218 | 27.4 | Plus |
Dgri\GH12082-PA | 354 | GH12082-PA | 202..337 | 132..262 | 158 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Syx7-PB | 282 | CG5081-PB | 1..282 | 1..282 | 1398 | 100 | Plus |
Syx7-PA | 282 | CG5081-PA | 1..282 | 1..282 | 1398 | 100 | Plus |
Syx13-PB | 284 | CG11278-PB | 35..274 | 11..274 | 271 | 25.8 | Plus |
Syx13-PA | 284 | CG11278-PA | 35..274 | 11..274 | 271 | 25.8 | Plus |
Syx16-PA | 352 | CG1467-PA | 206..348 | 132..277 | 191 | 34.2 | Plus |
Syx4-PB | 257 | CG2715-PB | 20..256 | 24..278 | 175 | 25 | Plus |
Syx4-PA | 333 | CG2715-PA | 96..332 | 24..278 | 175 | 25 | Plus |
Syx1A-PB | 296 | CG31136-PB | 35..292 | 22..276 | 163 | 22.7 | Plus |
Syx1A-PC | 291 | CG31136-PC | 35..283 | 22..267 | 161 | 23.1 | Plus |
Syx1A-PA | 291 | CG31136-PA | 35..283 | 22..267 | 161 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12362-PA | 297 | GI12362-PA | 1..297 | 1..282 | 1128 | 79.3 | Plus |
Dmoj\GI11753-PA | 279 | GI11753-PA | 32..270 | 11..274 | 188 | 27.3 | Plus |
Dmoj\GI10970-PA | 320 | GI10970-PA | 221..319 | 180..278 | 152 | 33.3 | Plus |
Dmoj\GI11088-PA | 352 | GI11088-PA | 227..349 | 155..278 | 152 | 32 | Plus |
Dmoj\GI11755-PA | 272 | GI11755-PA | 37..270 | 23..279 | 145 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15057-PA | 284 | GL15057-PA | 1..284 | 1..282 | 1251 | 92.3 | Plus |
Dper\GL25332-PA | 281 | GL25332-PA | 35..271 | 13..274 | 234 | 29.4 | Plus |
Dper\GL26795-PA | 360 | GL26795-PA | 213..357 | 132..278 | 170 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18647-PA | 284 | GA18647-PA | 1..284 | 1..282 | 1251 | 92.3 | Plus |
Dpse\GA10884-PA | 281 | GA10884-PA | 35..271 | 13..274 | 234 | 29.4 | Plus |
Dpse\GA13162-PA | 360 | GA13162-PA | 213..357 | 132..278 | 163 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22370-PA | 287 | GM22370-PA | 1..287 | 1..282 | 1435 | 96.5 | Plus |
Dsec\GM25395-PA | 284 | GM25395-PA | 35..281 | 11..281 | 225 | 27.3 | Plus |
Dsec\GM22676-PA | 350 | GM22676-PA | 204..337 | 132..268 | 168 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14962-PA | 287 | GD14962-PA | 1..287 | 1..282 | 1445 | 97.2 | Plus |
Dsim\GD14427-PA | 284 | GD14427-PA | 35..281 | 11..281 | 225 | 27.3 | Plus |
Dsim\GD15538-PA | 350 | GD15538-PA | 204..337 | 132..268 | 168 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12254-PA | 289 | GJ12254-PA | 1..289 | 1..282 | 1123 | 81.5 | Plus |
Dvir\GJ13463-PA | 278 | GJ13463-PA | 31..274 | 11..277 | 198 | 25.6 | Plus |
Dvir\GJ18528-PA | 315 | GJ18528-PA | 216..314 | 180..278 | 161 | 34.3 | Plus |
Dvir\GJ15770-PA | 363 | GJ15770-PA | 223..350 | 141..268 | 150 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17194-PA | 298 | GK17194-PA | 1..298 | 1..282 | 1051 | 79.5 | Plus |
Dwil\GK17426-PA | 290 | GK17426-PA | 39..290 | 8..282 | 199 | 23.8 | Plus |
Dwil\GK19716-PA | 353 | GK19716-PA | 217..349 | 145..277 | 167 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19759-PA | 283 | GE19759-PA | 1..283 | 1..282 | 1448 | 98.2 | Plus |
Dyak\GE21949-PA | 280 | GE21949-PA | 31..277 | 11..281 | 242 | 26.9 | Plus |
Dyak\GE23047-PA | 79 | GE23047-PA | 1..48 | 1..47 | 161 | 97.9 | Plus |
Dyak\GE15352-PA | 349 | GE15352-PA | 203..336 | 132..268 | 158 | 34.3 | Plus |
Dyak\GE23047-PA | 79 | GE23047-PA | 49..79 | 252..282 | 147 | 100 | Plus |