BDGP Sequence Production Resources |
Search the DGRC for LD23718
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 237 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8939-RA |
Protein status: | LD23718.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2620 |
Gene | Date | Evidence |
---|---|---|
CG8939 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8939 | 2004-07-15 | Blastp of sequenced clone |
CG8939 | 2008-04-29 | Release 5.5 accounting |
CG8939 | 2008-08-15 | Release 5.9 accounting |
CG8939 | 2008-12-18 | 5.12 accounting |
2620 bp (2620 high quality bases) assembled on 2004-07-15
GenBank Submission: AY069518
> LD23718.complete CACACTGTTGGCAACACGTGCACGAATTCGACATTTGATTTGAATTCGTT TTGATTTTTATCGTAATTGTACGAAAAGCCAGCAGCAATGGGCAAGAAGA CGAAAGTTGGAAAGACGCGCAAGGATAAGTTCTACCAGTTGGCCAAGGAG ACGGGCCTGCGATCGCGTGCCGCCTTCAAATTGATCCAGCTGAATCGCAA ATTCGGTTTCCTCCAACAATCGCAAGTATGTTTGGATTTGTGCGCAGCTC CCGGTGGCTGGATGCAGGTGGCCAAGCAGAATATGCCGGTGTCCAGCATT GTGATCGGCGTGGATCTCTTTCCCATCCGTCCCATTGCCGGCTGCATTGG TCTCGTCGAGGACATCACCACCGAGAAGTGCCGCCAATCGCTGACCAAGG AGCTGCAATCGTGGAAGGCCGATGTTGTGCTCCACGACGGTGCTCCCAAT GTGGGTAGGAACTGGCTGTACGATGCCTATCAGCAGATCTGTCTCACCCT CAACGCGCTCAAGTTGAGCACACAGTTTCTGCGCAACGGCGGCTGGTTTG TGACGAAGGTTTTCCGCTCCAAGGATTACAATGCCCTGCTCTGGGTGCTC AAGCAGCTGTTCAAGAAGGTGCACGCCACCAAGCCGAGTGCGTCGCGTAA GGAATCCGCCGAGATATTCGTCGTCTGTCAGGGCTACCTGGCGCCCGATC ACATTGATCCCCGTCTCCTGGACTCGAAGTATGTGTTCGAGGAGCTGGAT CTCGATGCCAAAAAGAAGAGCAGCCTGCTGCATCCCGAAAAGCAAAAGCG CATCAAGGCCGAGGGCTATACGGCCCAGGATATTGCGCTGCGCAACGATC TGGCTGCCACAGAGTTCCTGAAGGCTGAAAATGCACTGGCTGCGCTGCAG GGCATCGGTTCGATTCGCATCGATGATCAGCGCATTGCCAATCACAAGAA GACCACGCCAGAGATTCTCGAGTGCTGCAAGGATCTGAAGGTATTGGGCC GCAAGGATATCAAGGGTCTCGTGCAATGGTGGAAGGATGTTAGGGAGTTG TTCGTTGAAAAGGAAACCCCACTGGTCGTCGGCAATGCCGCAGATGAGAA GCCCAAGCCATTGACGCAAGCGGAAATCGAGGACATGGAAGATGCCGAGC TGCAAACGCAAATTGAGACAATTGTCGAAGAGGAGAAGAAGGACTTGAAG CGTAAGCGTAAGAAGACGCTCAAGACCAAGGCGAAATTGCACGAGAAGAT GAACCTTAATATGGTGATCAAGGGAGACGATGGTCCGGTCGAGGAAATGG AGCACGAAATCTTTGACCTCAAGAATATTCGCACCTCTGCCGAGCTTGAC GAGCTGCTAGACGTGCAACCCGATTTTGCTGTCGATGAATCGCAGCCCGA GGAAACAAAGCTGCCAAAATACAAGTATTTCGACAAGGATGAGGGCAACA TCAACGATGATCTAAACTATGACGATGACAATGATGAGGAGCAAAGCGAG GCCTCCGACGACGAGGATCAAATCAATGATAAGCAGGGCCTGGGCCTCAG TGACGACGACAATGATGAGGGCAATGCAAAGGGCAAAAACAAGAGAAAGA AACGCTCCGAGAATCCGCTGATTAAATCCAATGATTTCCGTGACAAAAAC ACCAAGCGAGAGCAACGCGTACAGCTGTGGTACGAGAAGGATGTACTACA GAATATCCAGTCGGATGACGACGAGGAAACCTACGATCTGAACAATCTGG CCAAGGAATTCAAGGCCAAGGGTGTCGCCGTTCTGGGTGAGAGCACCCTA ACGCCGGACGCCAACGAGGAGGTTGTCCAGGGTAAGAAGGCCAAACGTCG TGCACGCCATGAGACCGCAACTAAAGACAGCAGCTCAGAGTCATCCGAAT CCGAGGATGACGCTAACGAGGATAGCGACGGCGAACAGCCAGCTGCAGGT ACAAATGCCAAGAAGGTTCGCCTGTCCGAAAACGAAATGGCTTTGGGCGC ACTGCTGACACGCAGCAAGAAGACACGCCGTGACTTGATCGACGCAGCCT GGAATCGCTACGCTTTCAACGATGAGAACGTTCCCGTTTGGTTCAAGCTC GATGAGGACGAGCATATGACCAAGCCAACACCGGTGCCGAAGGAGCTGAC CGCCGAGTACCAGCGCAAGTTGCAGGAGGTGAACGTGCGTCCGATCAAGA AGGTCATGGAGGCCAAGGCGCGCAAGCATCGTCGTGCCACGAAACGCTTG GCCAAGGCTAAGAAGATGGCCGAAAAGATTATGGAGAACAGCGATGCCAC CAACCACGAGAAGTCCAAGCAACTGAAGAAGGTGTACAAGAAGGCTCAGG AGAAGAAGAAGGAGGTCACATATGTGGTGGCCAAGAAGCAGACAGCAGCT CGACGCGCACGTCGTCCAGCTGGCGTCAAGGGTCGCTATAAGGTCGTCGA TCCGCGCGAGAAGAAGGACAAGCGGTCAATGGATGCAAAGAAGAGGCGCG AAAAGGGTTCGAAGGGTCGCAAGGGGAAGGGGCGTAAATAAATGTAAATC TAAAAAATAAATATGTAATATTTTATAGATACTAAATATATATATAAAAC GAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8939-RA | 2719 | CG8939-RA | 20..2622 | 1..2603 | 13015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15886884..15888831 | 1..1948 | 99 | -> | Plus |
chrX | 15888893..15889478 | 1949..2534 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8939-RA | 1..2454 | 88..2541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8939-RA | 1..2454 | 88..2541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8939-RA | 1..2454 | 88..2541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8939-RA | 1..2454 | 88..2541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8939-RA | 1..2454 | 88..2541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8939-RA | 1..2601 | 1..2601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8939-RA | 1..2601 | 1..2601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8939-RA | 22..2622 | 1..2601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8939-RA | 1..2601 | 1..2601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8939-RA | 22..2622 | 1..2601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15997037..15998984 | 1..1948 | 100 | -> | Plus |
X | 15999046..15999698 | 1949..2601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15997037..15998984 | 1..1948 | 100 | -> | Plus |
X | 15999046..15999698 | 1949..2601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15997037..15998984 | 1..1948 | 100 | -> | Plus |
X | 15999046..15999698 | 1949..2601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15891070..15893017 | 1..1948 | 100 | -> | Plus |
arm_X | 15893079..15893731 | 1949..2601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16005135..16007082 | 1..1948 | 100 | -> | Plus |
X | 16007144..16007796 | 1949..2601 | 100 | Plus |
Translation from 87 to 2540
> LD23718.hyp MGKKTKVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLD LCAAPGGWMQVAKQNMPVSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQ SLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLTLNALKLSTQFLRN GGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGY LAPDHIDPRLLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGYTAQDIA LRNDLAATEFLKAENALAALQGIGSIRIDDQRIANHKKTTPEILECCKDL KVLGRKDIKGLVQWWKDVRELFVEKETPLVVGNAADEKPKPLTQAEIEDM EDAELQTQIETIVEEEKKDLKRKRKKTLKTKAKLHEKMNLNMVIKGDDGP VEEMEHEIFDLKNIRTSAELDELLDVQPDFAVDESQPEETKLPKYKYFDK DEGNINDDLNYDDDNDEEQSEASDDEDQINDKQGLGLSDDDNDEGNAKGK NKRKKRSENPLIKSNDFRDKNTKREQRVQLWYEKDVLQNIQSDDDEETYD LNNLAKEFKAKGVAVLGESTLTPDANEEVVQGKKAKRRARHETATKDSSS ESSESEDDANEDSDGEQPAAGTNAKKVRLSENEMALGALLTRSKKTRRDL IDAAWNRYAFNDENVPVWFKLDEDEHMTKPTPVPKELTAEYQRKLQEVNV RPIKKVMEAKARKHRRATKRLAKAKKMAEKIMENSDATNHEKSKQLKKVY KKAQEKKKEVTYVVAKKQTAARRARRPAGVKGRYKVVDPREKKDKRSMDA KKRREKGSKGRKGKGRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8939-PA | 817 | CG8939-PA | 1..817 | 1..817 | 4210 | 100 | Plus |
CG7009-PA | 320 | CG7009-PA | 1..234 | 7..229 | 346 | 38.5 | Plus |
CG5220-PA | 302 | CG5220-PA | 1..219 | 7..212 | 315 | 36.1 | Plus |
CG11447-PA | 250 | CG11447-PA | 48..244 | 13..200 | 200 | 29.9 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4240..4822 | 213..809 | 180 | 22 | Plus |
Translation from 87 to 2540
> LD23718.pep MGKKTKVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLD LCAAPGGWMQVAKQNMPVSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQ SLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLTLNALKLSTQFLRN GGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGY LAPDHIDPRLLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGYTAQDIA LRNDLAATEFLKAENALAALQGIGSIRIDDQRIANHKKTTPEILECCKDL KVLGRKDIKGLVQWWKDVRELFVEKETPLVVGNAADEKPKPLTQAEIEDM EDAELQTQIETIVEEEKKDLKRKRKKTLKTKAKLHEKMNLNMVIKGDDGP VEEMEHEIFDLKNIRTSAELDELLDVQPDFAVDESQPEETKLPKYKYFDK DEGNINDDLNYDDDNDEEQSEASDDEDQINDKQGLGLSDDDNDEGNAKGK NKRKKRSENPLIKSNDFRDKNTKREQRVQLWYEKDVLQNIQSDDDEETYD LNNLAKEFKAKGVAVLGESTLTPDANEEVVQGKKAKRRARHETATKDSSS ESSESEDDANEDSDGEQPAAGTNAKKVRLSENEMALGALLTRSKKTRRDL IDAAWNRYAFNDENVPVWFKLDEDEHMTKPTPVPKELTAEYQRKLQEVNV RPIKKVMEAKARKHRRATKRLAKAKKMAEKIMENSDATNHEKSKQLKKVY KKAQEKKKEVTYVVAKKQTAARRARRPAGVKGRYKVVDPREKKDKRSMDA KKRREKGSKGRKGKGRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10393-PA | 817 | GF10393-PA | 1..795 | 1..800 | 3006 | 76.7 | Plus |
Dana\GF23069-PA | 405 | GF23069-PA | 1..209 | 7..204 | 366 | 38.8 | Plus |
Dana\GF17080-PA | 301 | GF17080-PA | 1..222 | 7..213 | 329 | 36.5 | Plus |
Dana\GF17621-PA | 254 | GF17621-PA | 48..244 | 13..200 | 194 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17939-PA | 816 | GG17939-PA | 1..799 | 1..800 | 3753 | 95.9 | Plus |
Dere\GG14838-PA | 321 | GG14838-PA | 1..213 | 7..208 | 358 | 40.8 | Plus |
Dere\GG21940-PA | 300 | GG21940-PA | 1..219 | 7..212 | 333 | 36.1 | Plus |
Dere\GG23538-PA | 250 | GG23538-PA | 48..244 | 13..200 | 198 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17878-PA | 836 | GH17878-PA | 1..815 | 1..804 | 2894 | 75.4 | Plus |
Dgri\GH18555-PA | 356 | GH18555-PA | 1..221 | 7..215 | 372 | 40.3 | Plus |
Dgri\GH14141-PA | 311 | GH14141-PA | 1..221 | 7..212 | 330 | 36.2 | Plus |
Dgri\GH16178-PA | 249 | GH16178-PA | 50..246 | 13..200 | 180 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8939-PA | 817 | CG8939-PA | 1..817 | 1..817 | 4210 | 100 | Plus |
CG7009-PA | 320 | CG7009-PA | 1..234 | 7..229 | 346 | 38.5 | Plus |
CG5220-PA | 302 | CG5220-PA | 1..219 | 7..212 | 315 | 36.1 | Plus |
CG11447-PA | 250 | CG11447-PA | 48..244 | 13..200 | 200 | 29.9 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 4240..4822 | 213..809 | 180 | 22 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 4279..4861 | 213..809 | 180 | 22 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 4240..4822 | 213..809 | 180 | 22 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 4279..4861 | 213..809 | 180 | 22 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1140..1656 | 316..812 | 170 | 20.4 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1140..1656 | 316..812 | 170 | 20.4 | Plus |
Strn-Mlck-PT | 7905 | CG44162-PT | 3718..4302 | 210..809 | 164 | 20 | Plus |
Strn-Mlck-PV | 7944 | CG44162-PV | 3757..4341 | 210..809 | 164 | 20 | Plus |
Strn-Mlck-PS | 8216 | CG44162-PS | 3718..4302 | 210..809 | 164 | 20 | Plus |
Strn-Mlck-PU | 8255 | CG44162-PU | 3757..4341 | 210..809 | 164 | 20 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16447-PA | 826 | GI16447-PA | 1..812 | 1..805 | 3036 | 76.9 | Plus |
Dmoj\GI24754-PA | 382 | GI24754-PA | 1..216 | 1..210 | 384 | 41.1 | Plus |
Dmoj\GI10674-PA | 305 | GI10674-PA | 1..221 | 7..212 | 323 | 35.7 | Plus |
Dmoj\GI22429-PA | 254 | GI22429-PA | 50..251 | 13..203 | 184 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13168-PA | 189 | GL13168-PA | 1..178 | 627..804 | 734 | 79.2 | Plus |
Dper\GL12002-PA | 316 | GL12002-PA | 1..220 | 7..215 | 363 | 40.5 | Plus |
Dper\GL24549-PA | 304 | GL24549-PA | 1..222 | 7..213 | 310 | 35.6 | Plus |
Dper\GL12202-PA | 249 | GL12202-PA | 47..243 | 13..200 | 196 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23163-PA | 139 | GA23163-PA | 1..128 | 677..804 | 522 | 81.2 | Plus |
Dpse\GA20027-PA | 316 | GA20027-PA | 1..220 | 7..215 | 360 | 40 | Plus |
Dpse\GA18746-PA | 304 | GA18746-PA | 1..222 | 7..213 | 308 | 35.6 | Plus |
Dpse\GA23223-PA | 232 | GA23223-PA | 1..136 | 80..215 | 205 | 36 | Plus |
Dpse\GA11008-PA | 249 | GA11008-PA | 47..243 | 13..200 | 197 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11680-PA | 817 | GM11680-PA | 1..817 | 1..817 | 4257 | 98.4 | Plus |
Dsec\GM15097-PA | 321 | GM15097-PA | 1..220 | 7..215 | 366 | 40 | Plus |
Dsec\GM15199-PA | 302 | GM15199-PA | 1..219 | 7..212 | 344 | 37 | Plus |
Dsec\GM26867-PA | 250 | GM26867-PA | 48..244 | 13..200 | 199 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24825-PA | 353 | GD24825-PA | 11..353 | 475..817 | 1729 | 98 | Plus |
Dsim\GD17262-PA | 204 | GD17262-PA | 1..188 | 1..188 | 981 | 95.2 | Plus |
Dsim\GD19132-PA | 302 | GD19132-PA | 1..219 | 7..212 | 341 | 36.5 | Plus |
Dsim\GD19317-PA | 250 | GD19317-PA | 48..244 | 13..200 | 202 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15847-PA | 831 | GJ15847-PA | 1..814 | 1..805 | 3069 | 77.8 | Plus |
Dvir\GJ22540-PA | 316 | GJ22540-PA | 1..216 | 1..210 | 387 | 40.6 | Plus |
Dvir\GJ23026-PA | 313 | GJ23026-PA | 1..221 | 7..212 | 353 | 37.6 | Plus |
Dvir\GJ10992-PA | 254 | GJ10992-PA | 50..252 | 13..206 | 191 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19748-PA | 824 | GK19748-PA | 1..806 | 1..805 | 3093 | 79.8 | Plus |
Dwil\GK22383-PA | 305 | GK22383-PA | 1..221 | 7..215 | 357 | 39.8 | Plus |
Dwil\GK16249-PA | 306 | GK16249-PA | 1..221 | 7..212 | 331 | 36.2 | Plus |
Dwil\GK22358-PA | 249 | GK22358-PA | 50..246 | 13..200 | 199 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17245-PA | 819 | GE17245-PA | 1..802 | 1..800 | 3700 | 94.9 | Plus |
Dyak\GE25011-PA | 318 | GE25011-PA | 1..213 | 7..208 | 348 | 40.4 | Plus |
Dyak\GE24604-PA | 302 | GE24604-PA | 1..219 | 7..212 | 325 | 35.6 | Plus |
Dyak\GE11211-PA | 250 | GE11211-PA | 48..244 | 13..200 | 190 | 29.9 | Plus |
Dyak\GE25629-PA | 250 | GE25629-PA | 48..244 | 13..200 | 189 | 29.9 | Plus |