Clone LD23793 Report

Search the DGRC for LD23793

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:237
Well:93
Vector:pOT2
Associated Gene/Transcriptscra-RB
Protein status:LD23793.pep: gold
Preliminary Size:4095
Sequenced Size:4185

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2092 2001-11-29 Blastp of sequenced clone
CG2092 2003-01-01 Sim4 clustering to Release 3
scra 2008-04-29 Release 5.5 accounting
scra 2008-08-15 Release 5.9 accounting
scra 2008-12-18 5.12 accounting

Clone Sequence Records

LD23793.complete Sequence

4185 bp (4185 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069520

> LD23793.complete
CCAACCGCCGAAACGAGCAGAAGCGACGCGCAGAATTTCGAATGCAAACG
GACGCGCAACCCGCCAGTGAAAAACAAACATCAAATATCGCCAACGTGGA
GTGTCGAGCAGTACAGTGAATTCAATAGCATAGTGCGCGCAATCACAACT
CGCATTTGCATTTGCAGCTGCAGCAACAACAATGGACCCGTTTACTCAGC
ACATGCTCGAGAAGGCGGAACAGCGCAGTCGCGCCCTTGGCATCAGCAAT
GCCAGCAAATTTCCGCTCGTCGAGTGCAGCGTTCCAAGCTCCTCCGCCAC
CTCCGCATCCGGCGGGGATGCTGGGGTCCTGGCACCGAGGAGCCGGTCGC
CTGGAGGCCAGAGCGCGGCTAGCGGCGGCGGCAAGGTCGTTACGTTGGGA
AAGGCCACGCTGGAGGCGTCGCCGGCGAAGCCGCTGCGTCACTATACGGC
GGTAAACAAGGAAAACTTGGATATGGGCATAGAGATAAACATAACCACGG
ACAAGCCAATTGGGGTGCAAGTTGAGATTCAGGAGCAGGAGGTGACAGAT
GACGAAGAGCAGGCGGAAGGAGGTGCGCTAAATCCCCTGCTGGAGGCGGA
ACCAGTAAACCAGCCCCTAGCCAGGCTAAGGGACACTTCCCGCAGCCGAC
TGCAACGCATGGGTGCCCTGTACTCAAACACGGACGATCTATCCTCCCCA
ATCCACCGAACCGAGGGGCAGTTCCATGTGACAACGGGTGAGGAAGAGGA
CTGCGGCAACCGTAGCAGCAGGCAACCAAAACAACGGTTGGGCAAACTGG
CCGCCTTGGCGGATACCATCAATCAGTGGGAGGATGACACGTCGCACCAC
GAAGTGCACAGACTGCTCGAAGCACCTCCACCGAAACCGCATTTGTCCAG
TCGAAGGGCCGAGAAGGGTCCAGCTCCACTGCCACCCAAGAAGGATGAAG
TCGACGAGGCAAGCAGGACCAAGCAGCTGAAGTGGGATCCCAAGGTATTG
AGCTCTCTGGAGGCACAAGGTTTTCAGCGCCGCGAATCATCGACCATTAA
ACACACATATGATTATGCCAAACAGGAAGAGGCGGCCCCAGCCTCCAAAG
TGGAAGATGCGGTATTAACTGCCAAGCCGCCAGTGCCGCAGAAATCAACG
ACGGTCAGCCAGGTCGCCAAGAACTTTGCATCTTCCGCCCCAGCGCCTAA
GCCCGCACCAGCGCCTGCTGTTAGTGTGAAGTCCGGCTTGGTTTCCGGAC
GGGCGGCTCTCTTTGAAAACAAGGGAACCGGAGGACAGTCGCAAGGCCTA
CGCAACCAGAAGGATCCTTGTGAGCTGTCGCTGAAGGAGCGGATGAAGCT
GTTCGAAACGGGCAACAACAAAGCGATGTTGCCGATGGCGCCAATAGGAT
CTGCTCCCAGTATTACCCAAATCCGAGCGGAAGAGGTGAAACAACATTTA
GCTGCAATGCATCCGGTGACTGCTGCCGCAGCTACTACCGTGGTTGCAGC
AACCAAGCCGAAACAGGAAAACAAGCTGCGTGACAAGGTGGCCGCTTTGG
TGGCAAATGCGCAATCAAGTGCAGAGACGCGTATCAAGGACATTGATCGC
CAAAGGCAGGAAGACATGCAGATTATTTCTAATCGCTTTAACAAACAAAA
GGAGCTCTTTGACAATCAACCATCCGATAGTTCTGTGGCTGCTCAAGCTC
GACCTCCCGCGCCAGCTCCCAGCAGAGTAGTGCGGCCCATGCCACCGCCT
CCACCACCGCCCATCGCTGCTCTCTCGCCCGGACTGGCCAGCAGCAAGAG
GCGATCACCTGGTGATGCGCCCACCACTGACGAGGATTCGAAGCGAGCCC
GCAAATCGCATTCGGATCGTCTGTATCCCGCCCTGTCCGACCTCGACTCC
AGCGGTGACAACTGCTGCGCCGCCGAAACTGCCTCCGCTACGGATGACAG
CCATCAACAGGACGAGGAGGAAACCGAAAGTTGCATGGATGAGTCCGACG
ACCAGTCACAGACTGAGGACAGTAGCGCCGGCATGTGCAATGGCAGTCTT
GGCCGCGAGATAATGAGCGCAGTGCAGCGCAACGAAGTGGAGATGCAGCA
GCAGCAGACGGGCAAGAAGACTGTGCGCTATGCGGACCAGGACATGTATT
ACGATGACAGCTCTCTGAACTCGTCGCAGGTCTCAGCGGGCATCGATGAT
TATCTGGATGAAGCACTTGTCGAGGACTACGGCAGCACTCAGGATGACCA
GAGCGACAGCGGGGACGAGCAAAATGCCAGTCGGCTGTCCTTGGGCAGCA
AAGGAACGACGGCCTCAAACAGCTTTTCCTTCCGAAAAAATCCTGCCTCT
ATTTGCACGCCTATCGAAGAGCACCATGAGATGGAGATGGACCTGCAGAC
GCCACTGCTCAGTGGTGCCCAGCCGGTCAAGTCTGAATTGAGTGTCAACC
AGGACAACGACAACCTGGTTACCCTGGTGCACACGGTCAGCTTCTATCGC
CGCCAACAGAGCGCTAACAGCTCCAATTCCACACCGGTTCGCAAGATCTG
TCGAGAGCAGCAGGTCATGCGATCAGCCCTAGCAGGCGATTGTCATGCCA
AGCACAGACTGGAGTACGACTCTCCTCAGCAGTCTGATTATGTCGCAGCA
GCAACTGACATAGCTGATCAGACCGACGAGGACGATGAAGAGATGCAGAA
TGCGCGGGAAGTAAACGATGCATCGCAGGCACAAGACAAGATCAAAAAGC
TGTTGAGCGAGGTGTGCAAGCAGCAGCAGGTGATAGGACAAGCCAGTCAG
GCCCTCAACCTTTGTGCTGCCACCGTAGAATTCTCCGGCTCCACAGAGTC
CGTGGAGGGAGAGCGATATCTCCTTCTTGCAACCCATCGACGCCAGGCGT
GTTTGGATGAAGTCCAGCGTTTAAGAGTTGAGAACAGTATTCGTCCGGTG
GGTGCACCAAAAGAAAAGGGCCTACTGACGGTCAAGGACATAACCATTCC
ACTGCGACAGGAGTACGTGCGTAAAATGGCCTCGAACAACATTAACGGCC
ATCATCTTGTGTGCCTCCTGAAGTACAATGAGCACGTGCTGGCCACCAAG
ACAGTACCCACGATGCCAGGGCTGCTGTCTGTCAAGTTTCCCGATGTCCT
GCAACTAAACAATGTATATGCTGACTTCAGGATCACGCTAGAAATCTATG
GCATGTTGGCCCAACGCGATCAGCTGCCTCACGAGCTGAAATACCACATC
AACTTGAACAAGAAGGGTGGCATCAAGACGCCAAAGAAGAAGGGCGGCGA
GAATCGACTGGTGATGCCGCCAGTACAAAGTCCGGCGGGACCGCATGTGG
TACGGACACCGCAGCTGGTGCAATACGGCTTTGCCATTTTCTCGCTGCGT
GAAATTCAACGCACCACATGGACGCTGACCCAGGTGCTGGGCGTCAGTCC
ACTGGAGGGTGTGGTTCACATGAAAGTCAATTGCGAACTATCCGTAAGCG
TGGAGTACAAGGGATTCCTTACCATGTTCGAAGACATCTCCGGTTTCGGG
GCATGGCATCGTCGTTGGTGCTATCTGAATGGCTCCGTGATCAACTACTG
GAAGTACCCGGATGATGAGAAGCGCAAGACGCCAATGGGTAGTATAGATC
TGAATTCCTGCACTTCGCAGAAGGTGACCACGGCACCGCGCGACATTTGC
GCCCGTCTCAACACCATGCTGCTGGAGTGCGAACGGCCGGCGCTGGAGAC
AGACCAAGAGTCCTTGATAATCGTACCCAACGGACGTACCACCACGGTGC
GCCATCTGCTCTCAGCCGACACAAAGGAGGAGCGCGAGGAGTGGTGCGCC
TACCTTAACAAGGCACTGACACTGCTGCGCGCCTGGGGAACCACCCACTG
ACCCGCTGACCCATTGCAATTTTGTCAGCAGCACGGACAATGACCACAAA
CGGGCGGGTTGTTAACAGTTTTCTCTTTTTAAGTTACTCAATTTGCTATT
TTAATCGTGTTCGCATTGGTATTAATTTTGTTTTATGTTTCCAATTCAAA
TTTTTCGTTTCCATCTTGGAGTGGGACACGTTCGTGTTCGTCTATATCGA
CATAACTTTTTACTTATGTACATTTAATTTAGGATGACTCGCTAAATATA
TATGTGTAAACCCCCGTAAAAAAAAAAAAAAAAAA

LD23793.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
scra-RB 4523 scra-RB 200..4371 1..4172 20860 100 Plus
scra.a 4290 scra.a 145..2629 1..2485 12425 100 Plus
scra.b 4263 scra.b 145..2263 1..2119 10595 100 Plus
scra.b 4263 scra.b 2262..4256 2178..4172 9975 100 Plus
scra.a 4290 scra.a 2630..4283 2519..4172 8270 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:11:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3481592..3482562 3181..4151 4855 100 Plus
chr2R 21145070 chr2R 3478280..3479208 514..1442 4585 99.6 Plus
chr2R 21145070 chr2R 3480754..3481117 2519..2882 1820 100 Plus
chr2R 21145070 chr2R 3479274..3479639 1443..1808 1815 99.7 Plus
chr2R 21145070 chr2R 3477900..3478219 197..516 1600 100 Plus
chr2R 21145070 chr2R 3481224..3481529 2876..3181 1515 99.7 Plus
chr2R 21145070 chr2R 3480475..3480696 2297..2518 1110 100 Plus
chr2R 21145070 chr2R 3477598..3477796 1..199 995 100 Plus
chr2R 21145070 chr2R 3480235..3480413 2118..2296 880 99.4 Plus
chr2R 21145070 chr2R 3479694..3479873 1805..1984 870 98.9 Plus
chr2R 21145070 chr2R 3480029..3480169 1979..2119 705 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:14:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:11:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7594256..7595247 3181..4172 4960 100 Plus
2R 25286936 2R 7590945..7591873 514..1442 4645 100 Plus
2R 25286936 2R 7591938..7592303 1443..1808 1830 100 Plus
2R 25286936 2R 7593418..7593781 2519..2882 1820 100 Plus
2R 25286936 2R 7590565..7590884 197..516 1600 100 Plus
2R 25286936 2R 7593888..7594193 2876..3181 1515 99.7 Plus
2R 25286936 2R 7593139..7593360 2297..2518 1110 100 Plus
2R 25286936 2R 7590263..7590461 1..199 995 100 Plus
2R 25286936 2R 7592899..7593077 2118..2296 895 100 Plus
2R 25286936 2R 7592358..7592537 1805..1984 870 98.9 Plus
2R 25286936 2R 7592693..7592833 1979..2119 705 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:16:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 7595455..7596446 3181..4172 4960 100 Plus
2R 25260384 2R 7592144..7593072 514..1442 4645 100 Plus
2R 25260384 2R 7593137..7593502 1443..1808 1830 100 Plus
2R 25260384 2R 7594617..7594980 2519..2882 1820 100 Plus
2R 25260384 2R 7591764..7592083 197..516 1600 100 Plus
2R 25260384 2R 7595087..7595392 2876..3181 1515 99.6 Plus
2R 25260384 2R 7594338..7594559 2297..2518 1110 100 Plus
2R 25260384 2R 7591462..7591660 1..199 995 100 Plus
2R 25260384 2R 7594098..7594276 2118..2296 895 100 Plus
2R 25260384 2R 7593557..7593736 1805..1984 870 98.8 Plus
2R 25260384 2R 7593892..7594032 1979..2119 705 100 Plus
Blast to na_te.dros performed on 2019-03-16 02:11:26 has no hits.

LD23793.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:12:55 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3480475..3480696 2297..2518 100 -> Plus
chr2R 3477598..3477796 1..199 100 -> Plus
chr2R 3477903..3478217 200..514 100 -> Plus
chr2R 3478281..3479208 515..1442 99 -> Plus
chr2R 3479274..3479639 1443..1808 99 -> Plus
chr2R 3479698..3479869 1809..1980 100 -> Plus
chr2R 3480031..3480169 1981..2119 100 -> Plus
chr2R 3480237..3480413 2120..2296 99 -> Plus
chr2R 3480754..3481117 2519..2882 100 -> Plus
chr2R 3481231..3481529 2883..3181 100 -> Plus
chr2R 3481593..3482581 3182..4167 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:00:59 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
scra-RB 1..3720 182..3901 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:20:17 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
scra-RB 1..3720 182..3901 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:35:02 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
scra-RB 1..3720 182..3901 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:46:32 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
scra-RB 1..3720 182..3901 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:00:16 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
scra-RB 1..3720 182..3901 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:54:07 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
scra-RB 145..4311 1..4167 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:20:17 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
scra-RB 145..4311 1..4167 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:35:02 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
scra-RB 145..4311 1..4167 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:46:32 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
scra-RB 145..4311 1..4167 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:00:16 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
scra-RB 145..4311 1..4167 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:12:55 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7592695..7592833 1981..2119 100 -> Plus
2R 7592901..7593077 2120..2296 100 -> Plus
2R 7593139..7593360 2297..2518 100 -> Plus
2R 7593418..7593781 2519..2882 100 -> Plus
2R 7591938..7592303 1443..1808 100 -> Plus
2R 7593895..7594193 2883..3181 100 -> Plus
2R 7590263..7590461 1..199 100 -> Plus
2R 7590568..7590882 200..514 100 -> Plus
2R 7590946..7591873 515..1442 100 -> Plus
2R 7592362..7592533 1809..1980 100 -> Plus
2R 7594257..7595242 3182..4167 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:12:55 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7592695..7592833 1981..2119 100 -> Plus
2R 7592901..7593077 2120..2296 100 -> Plus
2R 7593139..7593360 2297..2518 100 -> Plus
2R 7593418..7593781 2519..2882 100 -> Plus
2R 7591938..7592303 1443..1808 100 -> Plus
2R 7593895..7594193 2883..3181 100 -> Plus
2R 7590263..7590461 1..199 100 -> Plus
2R 7590568..7590882 200..514 100 -> Plus
2R 7590946..7591873 515..1442 100 -> Plus
2R 7592362..7592533 1809..1980 100 -> Plus
2R 7594257..7595242 3182..4167 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:12:55 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7592695..7592833 1981..2119 100 -> Plus
2R 7592901..7593077 2120..2296 100 -> Plus
2R 7593139..7593360 2297..2518 100 -> Plus
2R 7593418..7593781 2519..2882 100 -> Plus
2R 7591938..7592303 1443..1808 100 -> Plus
2R 7593895..7594193 2883..3181 100 -> Plus
2R 7590263..7590461 1..199 100 -> Plus
2R 7590568..7590882 200..514 100 -> Plus
2R 7590946..7591873 515..1442 100 -> Plus
2R 7592362..7592533 1809..1980 100 -> Plus
2R 7594257..7595242 3182..4167 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:35:02 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3480644..3480865 2297..2518 100 -> Plus
arm_2R 3479867..3480038 1809..1980 100 -> Plus
arm_2R 3480200..3480338 1981..2119 100 -> Plus
arm_2R 3480406..3480582 2120..2296 100 -> Plus
arm_2R 3477768..3477966 1..199 100 -> Plus
arm_2R 3478073..3478387 200..514 100 -> Plus
arm_2R 3478451..3479378 515..1442 100 -> Plus
arm_2R 3479443..3479808 1443..1808 100 -> Plus
arm_2R 3480923..3481286 2519..2882 100 -> Plus
arm_2R 3481400..3481698 2883..3181 100 -> Plus
arm_2R 3481762..3482747 3182..4167 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:22:56 Download gff for LD23793.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7595094..7595392 2883..3181 100 -> Plus
2R 7591767..7592081 200..514 100 -> Plus
2R 7592145..7593072 515..1442 100 -> Plus
2R 7593137..7593502 1443..1808 100 -> Plus
2R 7593561..7593732 1809..1980 100 -> Plus
2R 7593894..7594032 1981..2119 100 -> Plus
2R 7594100..7594276 2120..2296 100 -> Plus
2R 7594338..7594559 2297..2518 100 -> Plus
2R 7594617..7594980 2519..2882 100 -> Plus
2R 7595456..7596441 3182..4167 100   Plus
2R 7591462..7591660 1..199 100 -> Plus

LD23793.hyp Sequence

Translation from 181 to 3900

> LD23793.hyp
MDPFTQHMLEKAEQRSRALGISNASKFPLVECSVPSSSATSASGGDAGVL
APRSRSPGGQSAASGGGKVVTLGKATLEASPAKPLRHYTAVNKENLDMGI
EINITTDKPIGVQVEIQEQEVTDDEEQAEGGALNPLLEAEPVNQPLARLR
DTSRSRLQRMGALYSNTDDLSSPIHRTEGQFHVTTGEEEDCGNRSSRQPK
QRLGKLAALADTINQWEDDTSHHEVHRLLEAPPPKPHLSSRRAEKGPAPL
PPKKDEVDEASRTKQLKWDPKVLSSLEAQGFQRRESSTIKHTYDYAKQEE
AAPASKVEDAVLTAKPPVPQKSTTVSQVAKNFASSAPAPKPAPAPAVSVK
SGLVSGRAALFENKGTGGQSQGLRNQKDPCELSLKERMKLFETGNNKAML
PMAPIGSAPSITQIRAEEVKQHLAAMHPVTAAAATTVVAATKPKQENKLR
DKVAALVANAQSSAETRIKDIDRQRQEDMQIISNRFNKQKELFDNQPSDS
SVAAQARPPAPAPSRVVRPMPPPPPPPIAALSPGLASSKRRSPGDAPTTD
EDSKRARKSHSDRLYPALSDLDSSGDNCCAAETASATDDSHQQDEEETES
CMDESDDQSQTEDSSAGMCNGSLGREIMSAVQRNEVEMQQQQTGKKTVRY
ADQDMYYDDSSLNSSQVSAGIDDYLDEALVEDYGSTQDDQSDSGDEQNAS
RLSLGSKGTTASNSFSFRKNPASICTPIEEHHEMEMDLQTPLLSGAQPVK
SELSVNQDNDNLVTLVHTVSFYRRQQSANSSNSTPVRKICREQQVMRSAL
AGDCHAKHRLEYDSPQQSDYVAAATDIADQTDEDDEEMQNAREVNDASQA
QDKIKKLLSEVCKQQQVIGQASQALNLCAATVEFSGSTESVEGERYLLLA
THRRQACLDEVQRLRVENSIRPVGAPKEKGLLTVKDITIPLRQEYVRKMA
SNNINGHHLVCLLKYNEHVLATKTVPTMPGLLSVKFPDVLQLNNVYADFR
ITLEIYGMLAQRDQLPHELKYHINLNKKGGIKTPKKKGGENRLVMPPVQS
PAGPHVVRTPQLVQYGFAIFSLREIQRTTWTLTQVLGVSPLEGVVHMKVN
CELSVSVEYKGFLTMFEDISGFGAWHRRWCYLNGSVINYWKYPDDEKRKT
PMGSIDLNSCTSQKVTTAPRDICARLNTMLLECERPALETDQESLIIVPN
GRTTTVRHLLSADTKEEREEWCAYLNKALTLLRAWGTTH*

LD23793.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:31:04
Subject Length Description Subject Range Query Range Score Percent Strand
scra-PB 1239 CG2092-PB 1..1239 1..1239 6383 100 Plus
scra-PA 1212 CG2092-PA 1..1212 1..1239 6210 97.8 Plus
scra-PC 616 CG2092-PC 1..604 1..604 3066 99.3 Plus
CG30183-PC 1555 CG30183-PC 781..1551 428..1235 203 20.5 Plus
CG30183-PA 1555 CG30183-PA 781..1551 428..1235 203 20.5 Plus

LD23793.pep Sequence

Translation from 181 to 3900

> LD23793.pep
MDPFTQHMLEKAEQRSRALGISNASKFPLVECSVPSSSATSASGGDAGVL
APRSRSPGGQSAASGGGKVVTLGKATLEASPAKPLRHYTAVNKENLDMGI
EINITTDKPIGVQVEIQEQEVTDDEEQAEGGALNPLLEAEPVNQPLARLR
DTSRSRLQRMGALYSNTDDLSSPIHRTEGQFHVTTGEEEDCGNRSSRQPK
QRLGKLAALADTINQWEDDTSHHEVHRLLEAPPPKPHLSSRRAEKGPAPL
PPKKDEVDEASRTKQLKWDPKVLSSLEAQGFQRRESSTIKHTYDYAKQEE
AAPASKVEDAVLTAKPPVPQKSTTVSQVAKNFASSAPAPKPAPAPAVSVK
SGLVSGRAALFENKGTGGQSQGLRNQKDPCELSLKERMKLFETGNNKAML
PMAPIGSAPSITQIRAEEVKQHLAAMHPVTAAAATTVVAATKPKQENKLR
DKVAALVANAQSSAETRIKDIDRQRQEDMQIISNRFNKQKELFDNQPSDS
SVAAQARPPAPAPSRVVRPMPPPPPPPIAALSPGLASSKRRSPGDAPTTD
EDSKRARKSHSDRLYPALSDLDSSGDNCCAAETASATDDSHQQDEEETES
CMDESDDQSQTEDSSAGMCNGSLGREIMSAVQRNEVEMQQQQTGKKTVRY
ADQDMYYDDSSLNSSQVSAGIDDYLDEALVEDYGSTQDDQSDSGDEQNAS
RLSLGSKGTTASNSFSFRKNPASICTPIEEHHEMEMDLQTPLLSGAQPVK
SELSVNQDNDNLVTLVHTVSFYRRQQSANSSNSTPVRKICREQQVMRSAL
AGDCHAKHRLEYDSPQQSDYVAAATDIADQTDEDDEEMQNAREVNDASQA
QDKIKKLLSEVCKQQQVIGQASQALNLCAATVEFSGSTESVEGERYLLLA
THRRQACLDEVQRLRVENSIRPVGAPKEKGLLTVKDITIPLRQEYVRKMA
SNNINGHHLVCLLKYNEHVLATKTVPTMPGLLSVKFPDVLQLNNVYADFR
ITLEIYGMLAQRDQLPHELKYHINLNKKGGIKTPKKKGGENRLVMPPVQS
PAGPHVVRTPQLVQYGFAIFSLREIQRTTWTLTQVLGVSPLEGVVHMKVN
CELSVSVEYKGFLTMFEDISGFGAWHRRWCYLNGSVINYWKYPDDEKRKT
PMGSIDLNSCTSQKVTTAPRDICARLNTMLLECERPALETDQESLIIVPN
GRTTTVRHLLSADTKEEREEWCAYLNKALTLLRAWGTTH*

LD23793.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13186-PA 1199 GF13186-PA 1..1199 1..1239 5081 82.3 Plus
Dana\GF11828-PA 1566 GF11828-PA 1453..1562 1109..1235 183 32.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23289-PA 1210 GG23289-PA 1..1210 1..1239 5987 93.6 Plus
Dere\GG20008-PA 1553 GG20008-PA 1440..1549 1109..1235 185 30.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:25:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21874-PA 1249 GH21874-PA 1..1249 1..1239 4380 72.2 Plus
Dgri\GH21554-PA 1538 GH21554-PA 1185..1534 870..1235 200 22.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:36
Subject Length Description Subject Range Query Range Score Percent Strand
scra-PB 1239 CG2092-PB 1..1239 1..1239 6383 100 Plus
scra-PA 1212 CG2092-PA 1..1212 1..1239 6210 97.8 Plus
scra-PC 616 CG2092-PC 1..604 1..604 3066 99.3 Plus
CG30183-PC 1555 CG30183-PC 781..1551 428..1235 203 20.5 Plus
CG30183-PA 1555 CG30183-PA 781..1551 428..1235 203 20.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20377-PA 1252 GI20377-PA 1..1252 1..1239 4678 74.7 Plus
Dmoj\GI19526-PA 1270 GI19526-PA 889..1266 835..1235 187 22.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20018-PA 1224 GL20018-PA 1..1224 1..1239 4833 76.6 Plus
Dper\GL11187-PA 191 GL11187-PA 24..181 372..542 402 54.4 Plus
Dper\GL17593-PA 1485 GL17593-PA 1180..1481 870..1235 237 23.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15234-PC 1250 GA15234-PC 1..1250 1..1239 4983 78.4 Plus
Dpse\GA15234-PA 1223 GA15234-PA 1..1223 1..1239 4811 76.2 Plus
Dpse\GA15234-PB 623 GA15234-PB 1..611 1..604 1885 68.3 Plus
Dpse\GA15707-PA 1537 GA15707-PA 1184..1533 870..1235 239 23.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:25:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20966-PA 1208 GM20966-PA 1..1208 1..1239 6259 94.8 Plus
Dsec\GM15520-PA 1322 GM15520-PA 1210..1319 1109..1235 197 30.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:25:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10494-PA 930 GD10494-PA 125..929 217..1056 3775 91.4 Plus
Dsim\GD15348-PA 603 GD15348-PA 1..603 638..1239 3259 99 Plus
Dsim\GD15346-PA 719 GD15346-PA 1..417 1..444 2104 91.2 Plus
Dsim\GD10494-PA 930 GD10494-PA 1..140 1..140 585 96.4 Plus
Dsim\GD15349-PA 61 GD15349-PA 1..61 1179..1239 308 95.1 Plus
Dsim\GD25024-PA 1516 GD25024-PA 1163..1513 870..1235 232 24 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:25:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22103-PA 1221 GJ22103-PA 1..1221 1..1239 4667 74.9 Plus
Dvir\GJ21095-PA 1273 GJ21095-PA 923..1269 870..1235 183 21.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10680-PA 1249 GK10680-PA 1..1245 1..1237 4374 72 Plus
Dwil\GK23171-PA 1493 GK23171-PA 1138..1487 870..1235 177 20.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:25:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19135-PA 1210 GE19135-PA 1..1210 1..1239 6187 93.9 Plus
Dyak\GE11544-PA 1560 GE11544-PA 1445..1556 1107..1235 198 31 Plus