BDGP Sequence Production Resources |
Search the DGRC for LD23804
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 238 |
Well: | 4 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7946-RA |
Protein status: | LD23804.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1859 |
Gene | Date | Evidence |
---|---|---|
CG7946 | 2001-01-01 | Release 2 assignment |
CG7946 | 2001-07-04 | Blastp of sequenced clone |
CG7946 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7946 | 2008-04-29 | Release 5.5 accounting |
CG7946 | 2008-08-15 | Release 5.9 accounting |
CG7946 | 2008-12-18 | 5.12 accounting |
1859 bp (1859 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051690
> LD23804.complete AAAAGAAGAAAAGCAGACGCCGCAGAAATACGGCAAAAGATATTGGTATT GCACGCGAACCAAACGAGCTAGAAGTCAAACGAAATGGGTAAGGAAAAGG CGGCCGCCTCCTACAGCATTGGCGACCTGGTGTTCGCCAAGGTGAAGGGC TATCCGCCCTGGCCGGCCAAAATCACCAAGAGCAACAACAACAAGAAGTA CAATGTTTACTTCTACGGCACGGGCGAAACGGCCAACATCAAGTTGGAGG ATCTGTTCCCGTACGCCAGCAACAAGGAGCGCTTCGCCACCGAGAAGATC ATGAAGCGGGCCAAGTTCATCGAGGCCATCGATCAGATCGAGAGCGCCTT GCGCGGCGAGGACTCGGCGCCCATTGATTTGCTCGACGGCGCGGAGCCAG TTGCTCCGCCCACAACTGGTGATGGCGTCAAGACGGAGGAGCCCAAGCCG GAGCCGGGACCGGAGCCAGCCACTGCTGCACCAGTCGCAGCAGCGGCCGA GAAGCCCAAGAAGAGCGGCACCCGGAAGACCAAGGCACCACCGCGCCATG TGGACGGGGATAGTGAAGCAGGCGCGGAACTAGCACCTCCGCCGGCCAAG CGAAGGGTTCCCACCGAGGGTCTGGCTACCGCCGCAGCCATCCCCGCTGC TCCGGCTGCGGCGACCCCCACCTCCAGCAAGAAATCAGTGAAGAAATCCA AGCCCACGGCTGCAGTAACTCCGATTCAGAAGCGGTCGCGGCCAGTCAAT AACATCCGGAACGAGATGCTCATGGTGTACATGCCCACAGCCAAGTGTTT GGGAATCGTTATAAACTACAAAAAGCCGGAGAGTTTCGAAAGCGCCGCTG CCGAGGAAGCCTGGATGGAGAACGCCCGCAAAGAAGCCTTGGAGCTCAAA CTGAAACTAGAGAGCGGCCAAATCAATCCGGAGTCCATGCCCGATAGGAT CGTGGTGGAGCCAACACGCAGCGAAATACCCAAGCAGGAGGCTTTGCGAT TCATCGAGGAGCTCATTGAGCACGAGGATGCCCTCTTCATGGAGCGAGAC TTCATCCAACTTTCCCAGCAGCTGCGCGAATGTTTGGGCCTGCGGCGCGC CAATGTGGGCAAATGCCTGGAGATCCTCGAGCAGTTCAAGGAGGTGGAGT TCACCAAGTTGATGCTGCTGCGCAATCCGGAGTGCGTGGACATAATGCGC CGACTTCGCCGGTATGTGGGCAATCTGGAGCTCTGGAAAATGGACCTGTC CGACGAGGTGGAGTTCAAGGAGAGGGCGCAGACCATACGCAAGGTCTCCT CTGGCATATACGATGGCTTCAAGAGTCTCTTCAATCCGGAGCCCGAGAGC GAGGACAACTTTTGGATCGACTTCTGCGAAAAGGTAAAAATCTACAAGAC CTATACGAAAAATATCAACGAAAACCTTCGCGTCGGGATGAACGAGCGCG GATATAATAGCCTGGTTTTGGCCAAGGAGGCCGCCGCTTCAGCCGGATCG GCTCCACAGTAAATGATCGAGGACCAGTTCTGCTGGACCAATTACATGAT AAGTTACTCGTAAGCGTTACAAACCAGGCAACTTAAAGACCGTGCTTTGG ATGACAAAGTTTTGATGAGCCAAGTGGGCTATGCTTAATTCTAGGTTAAA AATTCAGCTAAATTCCTTAATTCTGTTTGCCTGCCAGGTGCATGTCGTGT TACGCTGCGCTGATGGGGCTTTTCCTGCTGCATCCGCTTATTACCAGACT AAAAAAAAGGTTTTTGCTTCGAAACCCCTAAATATTTTCTAAGTTTGTAG ATGATTTGAATAATATTGAATTAAATATAGATGGTACATACAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7946-RA | 2151 | CG7946-RA | 282..2124 | 1..1843 | 9215 | 100 | Plus |
CG7946.a | 2835 | CG7946.a | 994..2835 | 1..1842 | 9210 | 100 | Plus |
CG7946.b | 2810 | CG7946.b | 1033..2658 | 1..1626 | 8130 | 100 | Plus |
CG7946.b | 2810 | CG7946.b | 2651..2810 | 1683..1842 | 785 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 25875959..25876761 | 751..1553 | 4015 | 100 | Plus |
chr3R | 27901430 | chr3R | 25875130..25875879 | 1..750 | 3750 | 100 | Plus |
chr3R | 27901430 | chr3R | 25876823..25877112 | 1552..1841 | 1450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 30053544..30054346 | 751..1553 | 4015 | 100 | Plus |
3R | 32079331 | 3R | 30052715..30053464 | 1..750 | 3750 | 100 | Plus |
3R | 32079331 | 3R | 30054408..30054699 | 1552..1843 | 1460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 29794375..29795177 | 751..1553 | 4015 | 100 | Plus |
3R | 31820162 | 3R | 29793546..29794295 | 1..750 | 3750 | 100 | Plus |
3R | 31820162 | 3R | 29795239..29795530 | 1552..1843 | 1460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25876825..25877112 | 1554..1841 | 100 | Plus | |
chr3R | 25875959..25876761 | 751..1553 | 100 | -> | Plus |
chr3R | 25875130..25875879 | 1..750 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7946-RA | 1..1428 | 85..1512 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7946-RA | 1..1428 | 85..1512 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7946-RA | 1..1428 | 85..1512 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7946-RA | 1..1428 | 85..1512 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7946-RA | 1..1428 | 85..1512 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7946-RA | 202..2042 | 1..1841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7946-RA | 202..2042 | 1..1841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7946-RA | 202..2042 | 1..1841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7946-RA | 202..2042 | 1..1841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7946-RA | 202..2042 | 1..1841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30052715..30053464 | 1..750 | 100 | -> | Plus |
3R | 30053544..30054346 | 751..1553 | 100 | -> | Plus |
3R | 30054410..30054697 | 1554..1841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30052715..30053464 | 1..750 | 100 | -> | Plus |
3R | 30053544..30054346 | 751..1553 | 100 | -> | Plus |
3R | 30054410..30054697 | 1554..1841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30052715..30053464 | 1..750 | 100 | -> | Plus |
3R | 30053544..30054346 | 751..1553 | 100 | -> | Plus |
3R | 30054410..30054697 | 1554..1841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25878437..25879186 | 1..750 | 100 | -> | Plus |
arm_3R | 25879266..25880068 | 751..1553 | 100 | -> | Plus |
arm_3R | 25880132..25880419 | 1554..1841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29793546..29794295 | 1..750 | 100 | -> | Plus |
3R | 29794375..29795177 | 751..1553 | 100 | -> | Plus |
3R | 29795241..29795528 | 1554..1841 | 100 | Plus |
Translation from 84 to 1511
> LD23804.pep MGKEKAAASYSIGDLVFAKVKGYPPWPAKITKSNNNKKYNVYFYGTGETA NIKLEDLFPYASNKERFATEKIMKRAKFIEAIDQIESALRGEDSAPIDLL DGAEPVAPPTTGDGVKTEEPKPEPGPEPATAAPVAAAAEKPKKSGTRKTK APPRHVDGDSEAGAELAPPPAKRRVPTEGLATAAAIPAAPAAATPTSSKK SVKKSKPTAAVTPIQKRSRPVNNIRNEMLMVYMPTAKCLGIVINYKKPES FESAAAEEAWMENARKEALELKLKLESGQINPESMPDRIVVEPTRSEIPK QEALRFIEELIEHEDALFMERDFIQLSQQLRECLGLRRANVGKCLEILEQ FKEVEFTKLMLLRNPECVDIMRRLRRYVGNLELWKMDLSDEVEFKERAQT IRKVSSGIYDGFKSLFNPEPESEDNFWIDFCEKVKIYKTYTKNINENLRV GMNERGYNSLVLAKEAAASAGSAPQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18819-PA | 498 | GF18819-PA | 1..498 | 1..475 | 1671 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11728-PA | 478 | GG11728-PA | 1..478 | 1..475 | 1992 | 89.6 | Plus |
Dere\GG11726-PA | 473 | GG11726-PA | 1..473 | 1..475 | 1980 | 85.7 | Plus |
Dere\GG16038-PA | 248 | GG16038-PA | 14..245 | 228..472 | 459 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19174-PA | 502 | GH19174-PA | 1..493 | 1..470 | 1584 | 64.1 | Plus |
Dgri\GH19176-PA | 245 | GH19176-PA | 1..229 | 233..461 | 853 | 69.3 | Plus |
Dgri\GH17401-PA | 154 | GH17401-PA | 14..154 | 12..161 | 144 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7946-PB | 475 | CG7946-PB | 1..475 | 1..475 | 2440 | 100 | Plus |
CG7946-PA | 475 | CG7946-PA | 1..475 | 1..475 | 2440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24210-PA | 475 | GI24210-PA | 1..470 | 1..472 | 1575 | 64.5 | Plus |
Dmoj\GI22730-PA | 143 | GI22730-PA | 5..90 | 3..89 | 157 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14025-PA | 485 | GL14025-PA | 1..476 | 1..466 | 1750 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20710-PA | 485 | GA20710-PA | 1..476 | 1..466 | 1750 | 71.3 | Plus |
Dpse\GA28522-PA | 361 | GA28522-PA | 104..357 | 215..470 | 637 | 52.7 | Plus |
Dpse\GA28896-PA | 191 | GA28896-PA | 6..179 | 288..463 | 405 | 44.3 | Plus |
Dpse\GA28960-PA | 128 | GA28960-PA | 1..86 | 1..85 | 240 | 54.7 | Plus |
Dpse\GA28522-PA | 361 | GA28522-PA | 1..86 | 1..85 | 219 | 51.2 | Plus |
Dpse\GA27257-PA | 305 | GA27257-PA | 156..285 | 304..441 | 152 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12857-PA | 473 | GM12857-PA | 1..473 | 1..475 | 2393 | 96.4 | Plus |
Dsec\GM19578-PA | 241 | GM19578-PA | 6..240 | 227..473 | 438 | 36.8 | Plus |
Dsec\GM25896-PA | 226 | GM25896-PA | 1..70 | 1..69 | 152 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21500-PA | 476 | GD21500-PA | 1..476 | 1..475 | 2408 | 96.6 | Plus |
Dsim\GD14806-PA | 241 | GD14806-PA | 6..240 | 227..473 | 432 | 36.4 | Plus |
Dsim\GD20466-PA | 230 | GD20466-PA | 1..70 | 1..69 | 154 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10780-PA | 483 | GJ10780-PA | 1..482 | 1..475 | 1611 | 66.1 | Plus |
Dvir\GJ14058-PA | 147 | GJ14058-PA | 14..97 | 13..95 | 176 | 41.2 | Plus |
Dvir\GJ24668-PA | 164 | GJ24668-PA | 13..98 | 11..95 | 158 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13869-PA | 516 | GK13869-PA | 191..511 | 156..467 | 1211 | 72.6 | Plus |
Dwil\GK15060-PA | 917 | GK15060-PA | 693..911 | 224..441 | 640 | 52.5 | Plus |
Dwil\GK15060-PA | 917 | GK15060-PA | 2..84 | 6..89 | 215 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10855-PA | 481 | GE10855-PA | 1..481 | 1..475 | 2102 | 88.6 | Plus |
Translation from 84 to 1511
> LD23804.hyp MGKEKAAASYSIGDLVFAKVKGYPPWPAKITKSNNNKKYNVYFYGTGETA NIKLEDLFPYASNKERFATEKIMKRAKFIEAIDQIESALRGEDSAPIDLL DGAEPVAPPTTGDGVKTEEPKPEPGPEPATAAPVAAAAEKPKKSGTRKTK APPRHVDGDSEAGAELAPPPAKRRVPTEGLATAAAIPAAPAAATPTSSKK SVKKSKPTAAVTPIQKRSRPVNNIRNEMLMVYMPTAKCLGIVINYKKPES FESAAAEEAWMENARKEALELKLKLESGQINPESMPDRIVVEPTRSEIPK QEALRFIEELIEHEDALFMERDFIQLSQQLRECLGLRRANVGKCLEILEQ FKEVEFTKLMLLRNPECVDIMRRLRRYVGNLELWKMDLSDEVEFKERAQT IRKVSSGIYDGFKSLFNPEPESEDNFWIDFCEKVKIYKTYTKNINENLRV GMNERGYNSLVLAKEAAASAGSAPQ*