BDGP Sequence Production Resources |
Search the DGRC for LD23830
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 238 |
Well: | 30 |
Vector: | pOT2 |
Associated Gene/Transcript | Non1-RA |
Protein status: | LD23830.pep: gold |
Preliminary Size: | 2190 |
Sequenced Size: | 2167 |
Gene | Date | Evidence |
---|---|---|
CG8801 | 2000-02-14 | Blastp of sequenced clone |
CG8801 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8801 | 2008-04-29 | Release 5.5 accounting |
CG8801 | 2008-08-15 | Release 5.9 accounting |
CG8801 | 2008-12-18 | 5.12 accounting |
2167 bp (2167 high quality bases) assembled on 2000-02-14
GenBank Submission: AF181654
> LD23830.complete TTTTTGCTTTCGATTCCGCATTTATTTTCCTTTCGACGCGTGGAAAATAA ACAAATCCTGCCAAGATGAGTCTGTACAACTTCAAAAAGATCATGGTGGT TCCGCCAGCAAAGGACTTCATCGACATTATGCTGTCGAAGACACAGCGCA AGACCCCGACGGTGGTCCACAAGGGCTACAAAATATCCAGAATCCGGGCA TTCTACACGCGCAAGGTGAAGTACACGCAGCAGAACTTCCACGATCGCTT GTCGCAGATCATTCAGGACTTTCCCAAACTGGACGACGTGCATCCTTTCT ACGCCGACTTGATGAACGTGCTGTACGACAAGGATCATTACAAGCTGGCG CTGGGTCAACTCAACACAGCCAGGCATTTGGTGGACAATGTGGCCAAGGA CTACGTGCGCCTGCTGAAGTACGGTGACTCGCTGTATCGCTGCAAACAGT TGAAGAAAGCTGCCCTGGGTCGCATGGCCACCATTATGAAGCGACAGGCC TCCAATCTGACGTATCTGGAGCAAGTGCGTCAGCATCTCTCGCGTCTGCC CACCATCGATCCCTATTCGCGTACCATCATCATCTGCGGTTTCCCCAACG TGGGCAAGTCCTCGTTCATCAACAAGATCACCCGCGCCGATGTGGAAGTG CAGCCCTACGCCTTCACCACGAAATCCCTGTACGTGGGACACACAGACTA CAAATATCTGCGCTGGCAGGTCATTGACACACCCGGCATCCTGGATCATC CCCTGGAAGAGCGCAATGTGATCGAAATGCAAGCCATTACTGCCTTGGCT CATTTGCGCGCCTGCGTCCTGTACTTCATGGATATCTCCGAGCAGTGCGG ACACTCCTTGGAGGAACAGGTCAAGCTGTTCGAGAGCATCAAGCCTTTGT TTACAAACAAACCCCTCATCCTGGCCATCAACAAGATCGATATTCTAACA CCAGAGGATCTGCCAGAGGAGCGACGAGCGATTATCACCAAACTACAGGA GGACAAGAACATTCCCGTAATGCTCATGTCCACCGTACAGGAAACCGGTG TCATGGAGGTGAAAACCGAGGCATGTGAGCGTTTGCTCTCGTACCGTGTT GACCAGAAGATGCGCACAAAGAAGGTGGACAACATCCTGAACCGCTTGCA TGTGGCGATGCCAGCGCCGCGAGATGACAAACTTCGTGCACCCTGCATCC CAGAAAAGGCCTCGGCGCGCCTGCTACAGAATGCCGACAAGGCAGAGCGC AAGCGCAAGCTGGAGAAGGAGATCGAGGAGGAGATGGGCGACGACTACAC GCTGGACCTCAAGAAGAACTACAGCGAAATCCCCGAGGAGGAGCGCTACG ACATTATTCCAGAGTTCTGGCAGGGTCACAACATTGCCGACTACATCGAT GCCGACATCTTCGACAAGCTGGAGGAGCTGGAGCGCGAGGAGGGACTGCG GGAGGAGAGCGGCGTCTACAAGGTGCCCGATATGACCATGGACGAGACGC TCAAGGAGATCCGCGAGATAGCCAAGCAAATCCGTGGCAAGCGCTTCGAG CTGCGCGACGAAAAGCGACTGTCGTCGCGAAAGAACAAGCCAGTCATCCC ACGAAACAAGCAGCCCAAGGTGCGTGACCGTTCCGTACAGAAACTGGTGT CGACGATGGAGGGCCTCGGTGTGGACATGTCCGGCAGCGAGAACGCCAAC TTCACCAAGTCCGTGGTGGATCTGCGTCGTGGCCAGGTGGCAGTTGGCTC CAAGAAGGTGCCCATGCAGCCGCTGCTCGACAAGGAGTCCTCTGCGGTGG TCAGGAAGACTGGTCAGCCTCTGAAGCGGGCGCCGTCGCGCGACACACTG GGCATCAAGAACTTGGCCATTCGCAAGAAGGCGCAAATTATGGCCAAGCG GGATATTGCCAAGAAGGTCACAAGCAGGGGTCTCAAGGGCGAGGCGGATC GCTTCATCGGCACCAAGATGCCGAAGCATTTGTTCTCCGGCAAGCGTGGA AATGGCAAGACGGATCGCCGTTAAGCGCCGCAGCCTTGGCTGGTTAAGTG ATTCTACCTGGTGGGCTCGCCTGCTCCTCTGTATAAACTAAGCGTCTATC TTTATCCCTGAAAAACATTTTCAATACAATATTGTATTTTTACAAAAAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8801-RA | 2433 | CG8801-RA | 146..2295 | 1..2150 | 10735 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5283850..5285604 | 2143..389 | 8700 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 5285674..5285950 | 388..112 | 1355 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 5286073..5286186 | 114..1 | 570 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9396353..9398114 | 2150..389 | 8795 | 99.9 | Minus |
2R | 25286936 | 2R | 9398184..9398460 | 388..112 | 1385 | 100 | Minus |
2R | 25286936 | 2R | 9398583..9398696 | 114..1 | 570 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9397552..9399313 | 2150..389 | 8795 | 99.9 | Minus |
2R | 25260384 | 2R | 9399383..9399659 | 388..112 | 1385 | 100 | Minus |
2R | 25260384 | 2R | 9399782..9399895 | 114..1 | 570 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5286074..5286186 | 1..113 | 100 | Minus | |
chr2R | 5283850..5285604 | 389..2143 | 99 | <- | Minus |
chr2R | 5285674..5285948 | 114..388 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8801-RA | 1..1959 | 66..2024 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8801-RA | 1..1959 | 66..2024 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8801-RA | 1..1959 | 66..2024 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8801-RA | 1..1959 | 66..2024 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Non1-RA | 1..1959 | 66..2024 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8801-RA | 55..2197 | 1..2143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8801-RA | 55..2197 | 1..2143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8801-RA | 39..2181 | 1..2143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8801-RA | 55..2197 | 1..2143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Non1-RA | 39..2181 | 1..2143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9396360..9398114 | 389..2143 | 100 | <- | Minus |
2R | 9398184..9398458 | 114..388 | 100 | <- | Minus |
2R | 9398584..9398696 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9396360..9398114 | 389..2143 | 100 | <- | Minus |
2R | 9398184..9398458 | 114..388 | 100 | <- | Minus |
2R | 9398584..9398696 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9396360..9398114 | 389..2143 | 100 | <- | Minus |
2R | 9398184..9398458 | 114..388 | 100 | <- | Minus |
2R | 9398584..9398696 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5283865..5285619 | 389..2143 | 100 | <- | Minus |
arm_2R | 5285689..5285963 | 114..388 | 100 | <- | Minus |
arm_2R | 5286089..5286201 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9397559..9399313 | 389..2143 | 100 | <- | Minus |
2R | 9399383..9399657 | 114..388 | 100 | <- | Minus |
2R | 9399783..9399895 | 1..113 | 100 | Minus |
Translation from 65 to 2023
> LD23830.hyp MSLYNFKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRK VKYTQQNFHDRLSQIIQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLN TARHLVDNVAKDYVRLLKYGDSLYRCKQLKKAALGRMATIMKRQASNLTY LEQVRQHLSRLPTIDPYSRTIIICGFPNVGKSSFINKITRADVEVQPYAF TTKSLYVGHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAITALAHLRAC VLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLILAINKIDILTPEDLP EERRAIITKLQEDKNIPVMLMSTVQETGVMEVKTEACERLLSYRVDQKMR TKKVDNILNRLHVAMPAPRDDKLRAPCIPEKASARLLQNADKAERKRKLE KEIEEEMGDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIFD KLEELEREEGLREESGVYKVPDMTMDETLKEIREIAKQIRGKRFELRDEK RLSSRKNKPVIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENANFTKSV VDLRRGQVAVGSKKVPMQPLLDKESSAVVRKTGQPLKRAPSRDTLGIKNL AIRKKAQIMAKRDIAKKVTSRGLKGEADRFIGTKMPKHLFSGKRGNGKTD RR*
Translation from 65 to 2023
> LD23830.pep MSLYNFKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRK VKYTQQNFHDRLSQIIQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLN TARHLVDNVAKDYVRLLKYGDSLYRCKQLKKAALGRMATIMKRQASNLTY LEQVRQHLSRLPTIDPYSRTIIICGFPNVGKSSFINKITRADVEVQPYAF TTKSLYVGHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAITALAHLRAC VLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLILAINKIDILTPEDLP EERRAIITKLQEDKNIPVMLMSTVQETGVMEVKTEACERLLSYRVDQKMR TKKVDNILNRLHVAMPAPRDDKLRAPCIPEKASARLLQNADKAERKRKLE KEIEEEMGDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIFD KLEELEREEGLREESGVYKVPDMTMDETLKEIREIAKQIRGKRFELRDEK RLSSRKNKPVIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENANFTKSV VDLRRGQVAVGSKKVPMQPLLDKESSAVVRKTGQPLKRAPSRDTLGIKNL AIRKKAQIMAKRDIAKKVTSRGLKGEADRFIGTKMPKHLFSGKRGNGKTD RR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13082-PA | 652 | GF13082-PA | 1..652 | 1..652 | 3157 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10559-PA | 652 | GG10559-PA | 1..652 | 1..652 | 3435 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21544-PA | 652 | GH21544-PA | 1..652 | 1..652 | 3181 | 92.6 | Plus |
Dgri\GH10882-PA | 375 | GH10882-PA | 204..322 | 175..293 | 154 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Non1-PB | 652 | CG8801-PB | 1..652 | 1..652 | 3340 | 100 | Plus |
Non1-PA | 652 | CG8801-PA | 1..652 | 1..652 | 3340 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19517-PA | 652 | GI19517-PA | 1..652 | 1..652 | 3155 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16889-PA | 653 | GL16889-PA | 1..653 | 1..652 | 3120 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21331-PA | 653 | GA21331-PA | 1..653 | 1..652 | 3117 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20605-PA | 652 | GM20605-PA | 1..652 | 1..652 | 3458 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10078-PA | 652 | GD10078-PA | 1..652 | 1..652 | 3461 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21086-PA | 652 | GJ21086-PA | 1..652 | 1..652 | 3195 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20864-PA | 652 | GK20864-PA | 1..652 | 1..652 | 3164 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22324-PA | 652 | GE22324-PA | 1..652 | 1..652 | 3446 | 98.8 | Plus |