BDGP Sequence Production Resources |
Search the DGRC for LD23846
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 238 |
Well: | 46 |
Vector: | pOT2 |
Associated Gene/Transcript | AdipoR-RA |
Protein status: | LD23846.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1785 |
Gene | Date | Evidence |
---|---|---|
CG5315 | 2001-01-01 | Release 2 assignment |
CG5315 | 2002-07-13 | Blastp of sequenced clone |
CG5315 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5315 | 2008-04-29 | Release 5.5 accounting |
CG5315 | 2008-08-15 | Release 5.9 accounting |
CG5315 | 2008-12-18 | 5.12 accounting |
1785 bp (1785 high quality bases) assembled on 2002-07-13
GenBank Submission: BT001487
> LD23846.complete TCACACTGGAAAAAACACAGAAAAAATTAAATTAAGGGAAAACAGATGAA AAACTGCAATTGCACGCAATTGAAGCAAGTGCAGCAAATAGTTTTTCGCG CCAGTGTTGACTCCTGGGCCTGCCGTCGAAGCCACGCCAACTGCGCGACT TTCGAGTGAATACTATTTGCGGAGTGCAAAACGAATCCGCGGGATCGTAA GACCATGGATTCGGCCACTAATCTCCTCGAGCAACAGGGCTCAGCGGCTG ATGTGAGTGGCGGGAGCCATCCCGCCGAGGTGGAGGTAACCACCCAGGCT CGAGCCACTTTCGGCATGGACGCCGAAGGACATGCTACCGGCGAGGCGGT GACCACCACCACGGCCACCTTGCGTAGAGAAGGTTCAGACGAGGATATCT TTGAGCAGGTGCAGATGATCCTGCGCAAGCGACGTGGCTGGGGACCGGAG GACTCGCTTAGCCCCAATGATCTGGACATTCTGGAGTACGACGATGAGTT GGTCGAGGAGGATGACGCCGGTTGTCCACTCCCCTCGACCCCGGAGGACA CACAGCTTATTGAGGCGGAGATGACGGAAGTGCTGAAGGCCGGAGTTCTC TCCGATGAAATTGATTTGGGCGCATTGGCACACAATGCCGCCGAGCAGGC AGAGGAGTTTGTGCGCAAGGTCTGGGAGGCTAGCTGGAAAGTGTGCCACT ACAAAAATCTACCCAAGTGGCTGCAGGATAACGACTTCCTACACCGCGGC CATCGCCCACCGCTCCCCTCTTTCCGTGCGTGCTTTAAATCAATTTTCCG CGTGCACACGGAAACGGGCAACATCTGGACACATCTTCTTGGCTGCATCG CCTTCATCGGCGTGGCATTATACTTCATCTCGCGTCCCTCGGTTGAGATC CAGACACAGGAGAAGATCGTTTTTGGCGCCTTCTTTATCGGTGCGATTGT GTGCCTAGGATTCTCATTCGCTTTTCACACACTGAGCTGTCATTCTGTAG AGATGGGAAGACTGTTTTCTAAACTTGACTACTGTGGAATTGCGCTGCTG ATCATGGGTTCCTTTGTGCCTTGGCTGTACTATGGCTTCTACTGTCATTA CCAGCCAAAGGTGATATACCTATCCGTTGTTAGCATTCTGGGCATCCTCT CCATCGTGGTCTCGCTATGGGACAAGTTTTCGGAGCCGGCACTTCGTCCC TTGCGCGCTGGCGTATTTATGAGCTTTGGCCTGTCGGGTGTGATTCCAGC TATTCACTACAGCATCATGGAGGGCTGGTTCAGCCAGATGAGCCGCGCCA GTCTGGGATGGCTAATTCTGATGGGCCTCCTCTACATTCTGGGCGCACTG CTGTACGCCCTCCGTGTTCCCGAACGCTGGTTCCCTGGAAAGTTTGACAT TTGGGGTCAATCACATCAAATATTCCACATACTGGTCATTGCGGCCGCTT TTGTCCACTACCATGGCATCTCTGAAATGGCCATGTACCGCGTCATGTAT AGCGAATGCACTGTTCCCATCGAACCAATAACCTTTTAGATGCTGAAGTG GATGCCAAGAAACAATCATCGTAAAAGCACATACAATCCCATTCATAGTA CGAGTAAAACATATATTAATGCGAACTAGCGCAGTTTTACAATGCAACCT TTTTAGCGTTTGGGGAGCATTTGTACCTTGTTATACAAAATCAACGGAAC CATATAGAAGACAAAAACACACACTTAACACACAATTACACGCATTTATC ATCAAAATCTTGCATAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18370241..18370657 | 574..158 | 2025 | 99 | Minus |
chr3R | 27901430 | chr3R | 18367717..18368080 | 1767..1404 | 1820 | 100 | Minus |
chr3R | 27901430 | chr3R | 18368640..18368994 | 1022..668 | 1775 | 100 | Minus |
chr3R | 27901430 | chr3R | 18368279..18368581 | 1325..1023 | 1485 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 18371191..18371348 | 158..1 | 775 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 18369205..18369307 | 671..569 | 515 | 100 | Minus |
chr3R | 27901430 | chr3R | 18368136..18368217 | 1405..1324 | 410 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22546708..22547124 | 574..158 | 2070 | 99.8 | Minus |
3R | 32079331 | 3R | 22544184..22544558 | 1778..1404 | 1875 | 100 | Minus |
3R | 32079331 | 3R | 22545118..22545472 | 1022..668 | 1775 | 100 | Minus |
3R | 32079331 | 3R | 22544757..22545059 | 1325..1023 | 1515 | 100 | Minus |
3R | 32079331 | 3R | 22547659..22547816 | 158..1 | 790 | 100 | Minus |
3R | 32079331 | 3R | 22545683..22545785 | 671..569 | 515 | 100 | Minus |
3R | 32079331 | 3R | 22544614..22544695 | 1405..1324 | 410 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22287539..22287955 | 574..158 | 2070 | 99.7 | Minus |
3R | 31820162 | 3R | 22285015..22285389 | 1778..1404 | 1875 | 100 | Minus |
3R | 31820162 | 3R | 22285949..22286303 | 1022..668 | 1775 | 100 | Minus |
3R | 31820162 | 3R | 22285588..22285890 | 1325..1023 | 1515 | 100 | Minus |
3R | 31820162 | 3R | 22288490..22288647 | 158..1 | 790 | 100 | Minus |
3R | 31820162 | 3R | 22286514..22286616 | 671..569 | 515 | 100 | Minus |
3R | 31820162 | 3R | 22285445..22285526 | 1405..1324 | 410 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18367717..18368079 | 1405..1767 | 100 | <- | Minus |
chr3R | 18368137..18368216 | 1325..1404 | 100 | <- | Minus |
chr3R | 18368280..18368581 | 1023..1324 | 99 | <- | Minus |
chr3R | 18368640..18368992 | 670..1022 | 100 | <- | Minus |
chr3R | 18369207..18369305 | 571..669 | 100 | <- | Minus |
chr3R | 18370245..18370656 | 159..570 | 99 | <- | Minus |
chr3R | 18371191..18371348 | 1..158 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5315-RA | 1..1335 | 205..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5315-RA | 1..1335 | 205..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5315-RA | 1..1335 | 205..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5315-RA | 1..1335 | 205..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AdipoR-RA | 1..1335 | 205..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5315-RA | 30..1796 | 1..1767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5315-RA | 30..1796 | 1..1767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5315-RA | 31..1797 | 1..1767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5315-RA | 30..1796 | 1..1767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
AdipoR-RA | 31..1797 | 1..1767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22544195..22544557 | 1405..1767 | 100 | <- | Minus |
3R | 22544615..22544694 | 1325..1404 | 100 | <- | Minus |
3R | 22544758..22545059 | 1023..1324 | 100 | <- | Minus |
3R | 22545118..22545470 | 670..1022 | 100 | <- | Minus |
3R | 22545685..22545783 | 571..669 | 100 | <- | Minus |
3R | 22546712..22547123 | 159..570 | 100 | <- | Minus |
3R | 22547659..22547816 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22544195..22544557 | 1405..1767 | 100 | <- | Minus |
3R | 22544615..22544694 | 1325..1404 | 100 | <- | Minus |
3R | 22544758..22545059 | 1023..1324 | 100 | <- | Minus |
3R | 22545118..22545470 | 670..1022 | 100 | <- | Minus |
3R | 22545685..22545783 | 571..669 | 100 | <- | Minus |
3R | 22546712..22547123 | 159..570 | 100 | <- | Minus |
3R | 22547659..22547816 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22544195..22544557 | 1405..1767 | 100 | <- | Minus |
3R | 22544615..22544694 | 1325..1404 | 100 | <- | Minus |
3R | 22544758..22545059 | 1023..1324 | 100 | <- | Minus |
3R | 22545118..22545470 | 670..1022 | 100 | <- | Minus |
3R | 22545685..22545783 | 571..669 | 100 | <- | Minus |
3R | 22546712..22547123 | 159..570 | 100 | <- | Minus |
3R | 22547659..22547816 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18369917..18370279 | 1405..1767 | 100 | <- | Minus |
arm_3R | 18370337..18370416 | 1325..1404 | 100 | <- | Minus |
arm_3R | 18370480..18370781 | 1023..1324 | 100 | <- | Minus |
arm_3R | 18370840..18371192 | 670..1022 | 100 | <- | Minus |
arm_3R | 18371407..18371505 | 571..669 | 100 | <- | Minus |
arm_3R | 18372434..18372845 | 159..570 | 100 | <- | Minus |
arm_3R | 18373381..18373538 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22285446..22285525 | 1325..1404 | 100 | <- | Minus |
3R | 22285589..22285890 | 1023..1324 | 100 | <- | Minus |
3R | 22285949..22286301 | 670..1022 | 100 | <- | Minus |
3R | 22286516..22286614 | 571..669 | 100 | <- | Minus |
3R | 22285026..22285388 | 1405..1767 | 100 | <- | Minus |
3R | 22287543..22287954 | 159..570 | 100 | <- | Minus |
3R | 22288490..22288647 | 1..158 | 100 | Minus |
Translation from 204 to 1538
> LD23846.pep MDSATNLLEQQGSAADVSGGSHPAEVEVTTQARATFGMDAEGHATGEAVT TTTATLRREGSDEDIFEQVQMILRKRRGWGPEDSLSPNDLDILEYDDELV EEDDAGCPLPSTPEDTQLIEAEMTEVLKAGVLSDEIDLGALAHNAAEQAE EFVRKVWEASWKVCHYKNLPKWLQDNDFLHRGHRPPLPSFRACFKSIFRV HTETGNIWTHLLGCIAFIGVALYFISRPSVEIQTQEKIVFGAFFIGAIVC LGFSFAFHTLSCHSVEMGRLFSKLDYCGIALLIMGSFVPWLYYGFYCHYQ PKVIYLSVVSILGILSIVVSLWDKFSEPALRPLRAGVFMSFGLSGVIPAI HYSIMEGWFSQMSRASLGWLILMGLLYILGALLYALRVPERWFPGKFDIW GQSHQIFHILVIAAAFVHYHGISEMAMYRVMYSECTVPIEPITF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16147-PA | 503 | GF16147-PA | 1..503 | 1..444 | 2039 | 78.7 | Plus |
Dana\GF18132-PA | 348 | GF18132-PA | 1..346 | 85..439 | 368 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12506-PA | 483 | GG12506-PA | 1..483 | 1..444 | 2245 | 91.3 | Plus |
Dere\GG21110-PA | 351 | GG21110-PA | 5..349 | 108..439 | 391 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17396-PA | 440 | GH17396-PA | 1..440 | 1..444 | 1873 | 80.6 | Plus |
Dgri\GH14088-PA | 355 | GH14088-PA | 63..353 | 144..439 | 339 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
AdipoR-PE | 444 | CG5315-PE | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PD | 444 | CG5315-PD | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PA | 444 | CG5315-PA | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PC | 444 | CG5315-PC | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PB | 362 | CG5315-PB | 29..362 | 110..444 | 1728 | 97.3 | Plus |
CG7530-PC | 351 | CG7530-PC | 1..349 | 85..439 | 419 | 28.6 | Plus |
CG7530-PB | 351 | CG7530-PB | 1..349 | 85..439 | 419 | 28.6 | Plus |
CG7530-PA | 351 | CG7530-PA | 1..349 | 85..439 | 419 | 28.6 | Plus |
CG7530-PD | 341 | CG7530-PD | 59..339 | 155..439 | 411 | 31.1 | Plus |
CG33203-PD | 450 | CG33203-PD | 177..416 | 166..416 | 200 | 27.3 | Plus |
CG33203-PE | 453 | CG33203-PE | 177..419 | 166..416 | 196 | 26.9 | Plus |
CG33203-PF | 500 | CG33203-PF | 177..419 | 166..416 | 196 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22724-PA | 440 | GI22724-PA | 1..440 | 1..444 | 1884 | 80.9 | Plus |
Dmoj\GI10620-PA | 362 | GI10620-PA | 70..360 | 144..439 | 352 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13682-PA | 371 | GL13682-PA | 9..371 | 81..444 | 1709 | 88 | Plus |
Dper\GL23669-PA | 357 | GL23669-PA | 83..355 | 163..439 | 358 | 30.6 | Plus |
Dper\GL13681-PA | 116 | GL13681-PA | 1..109 | 1..114 | 336 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18798-PB | 439 | GA18798-PB | 1..439 | 1..444 | 2057 | 88.1 | Plus |
Dpse\GA18798-PA | 484 | GA18798-PA | 1..484 | 1..444 | 2005 | 80.1 | Plus |
Dpse\GA30161-PB | 521 | GA30161-PB | 247..487 | 165..416 | 201 | 27.2 | Plus |
Dpse\GA30161-PA | 524 | GA30161-PA | 247..490 | 165..416 | 198 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23638-PA | 484 | GM23638-PA | 1..484 | 1..444 | 2326 | 91.7 | Plus |
Dsec\GM25830-PA | 351 | GM25830-PA | 1..349 | 85..439 | 392 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18448-PA | 483 | GD18448-PA | 1..483 | 1..444 | 2303 | 91.3 | Plus |
Dsim\GD20404-PA | 351 | GD20404-PA | 1..349 | 85..439 | 396 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24663-PA | 429 | GJ24663-PA | 1..429 | 1..444 | 1841 | 81.8 | Plus |
Dvir\GJ22972-PA | 356 | GJ22972-PA | 63..345 | 144..430 | 346 | 29.8 | Plus |
Translation from 204 to 1538
> LD23846.hyp MDSATNLLEQQGSAADVSGGSHPAEVEVTTQARATFGMDAEGHATGEAVT TTTATLRREGSDEDIFEQVQMILRKRRGWGPEDSLSPNDLDILEYDDELV EEDDAGCPLPSTPEDTQLIEAEMTEVLKAGVLSDEIDLGALAHNAAEQAE EFVRKVWEASWKVCHYKNLPKWLQDNDFLHRGHRPPLPSFRACFKSIFRV HTETGNIWTHLLGCIAFIGVALYFISRPSVEIQTQEKIVFGAFFIGAIVC LGFSFAFHTLSCHSVEMGRLFSKLDYCGIALLIMGSFVPWLYYGFYCHYQ PKVIYLSVVSILGILSIVVSLWDKFSEPALRPLRAGVFMSFGLSGVIPAI HYSIMEGWFSQMSRASLGWLILMGLLYILGALLYALRVPERWFPGKFDIW GQSHQIFHILVIAAAFVHYHGISEMAMYRVMYSECTVPIEPITF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
AdipoR-PE | 444 | CG5315-PE | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PD | 444 | CG5315-PD | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PA | 444 | CG5315-PA | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PC | 444 | CG5315-PC | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PB | 362 | CG5315-PB | 29..362 | 110..444 | 1728 | 97.3 | Plus |