BDGP Sequence Production Resources |
Search the DGRC for LD23868
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 238 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | CG16721-RA |
Protein status: | LD23868.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2531 |
Gene | Date | Evidence |
---|---|---|
CG16721 | 2001-01-01 | Release 2 assignment |
CG16721 | 2001-09-19 | Blastp of sequenced clone |
CG16721 | 2003-01-01 | Sim4 clustering to Release 3 |
CG16721 | 2008-04-29 | Release 5.5 accounting |
CG16721 | 2008-08-15 | Release 5.9 accounting |
CG16721 | 2008-12-18 | 5.12 accounting |
2531 bp (2531 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058533
> LD23868.complete CAACAACCAAAGTTTTCAATCGAAACGGAAACATTCGGATATCAGTCGTC GTTCTTAATAGTTCAGATTAGAATAAAAATCCTCCTGGAGGAGCATAATT GAGTGAAAATTAACTGCAAAATTTGTCTGTGATTGTGGAAAGTGAATCAG CTGTTTGGGAAAAGTAAAACGGAATACTCTGGAACCTTCTCGTCGTTTCT TCCTATTGCGAACTGACCCCGAGCGGAGCTTTAGCGACGACCTCGAACAA AGAACAAAGAAAGCCCGAGTGCAGTTGCCAATTGCCTTGTAATAATCACC AAGCCATATATACAACTGGCTCTAACCGGTGGTAACCAAATTCGCATTTG GTCGAAACCAGTTGCTGCAGCTGCCTAACGTCGCACTTCCGCCCGTGAGG AGACAACAAAGGACTGGAATTTGAATATGGATGCCCAGGAGAATAGGAGT GAACAGTCGGGACAATCGGGCGACCACGAAGAGCACGAGGAGCGCCGGAT CCGTACGGACAGCGAGAGTTCCGTGGAAAGCATGACGCGTTTCGTGCTGC CCAGCTTGGATGGTACTCCGCCGAAAATTGTGACCCTGGACGAAGTGTCC AGCATGTTCAAGAATTTGCGCAACATGGAGCTGGCCCACGAGATAGCCCT CAATCCGGACTTCAAGCTGCAGAAGTACGAGCCGCCCTCGGATAGTTTGG AGGGCGCCATCAAGAAGATGGTGCACAAGGCCTTTTGGGATCTGCTGCGT GTGCAGCTGGACCGCCAGCCGCCATCGTATGATCAGGCCATCCGGCTGCT GGCTGAGATCAAGGAGTGCTTCCCGCAGCTGCTGTCGCCCAACAACGAAC GTGCCCTGGCCCACATCAACGAGGTGCTGGATGACTCCGTCATCCGCCAG CAAGCGGAGCGGGGTACCCTGGACTTTCGAGCATATGCCAACTTTGTGAT CAACATCCTGTCGCGATCCTGTTCGCCAGCTAGGGACGAAGCAGTGGCCG CTCTGCGCAAGATCGACGATGTGGTGGACACGTTTCGCTGCATTCTCGAG CTGATGACGCTGATGAAGCTGGATATGGCCAACTTTATGCTTCGACTGGC GCGCACCGAAATCGCTGCCAATTCGGTGCAGTATGAGAAGGAGAAGTTTA GCAAGTACTTGCGCGAGTTCCATGGAAATGTTGGTTTTCCGGCCACTGAG GATTGGCTGCAGCGTCACCGGTCCGGTAGCAGCGATGATGAGACCATTTA CAATGCCTACATGCAGCTGATTGACTATCCGGCCGACAAGGAGTTCCCGG AGCTGTTGCGCATCGACAAAGAGCGCTTCGCCGGCCTAAGTTGGCGAGCC CAGCGCTTGATCCTGTGCGCCTCGCTCATCTCGGTGGCCCAGGGCATGCC TATCATATCGCAGCGCCGCGAGAACCGCATCAAGCTGGCCCAGCAGCTGG ACATCATTGTGCAGGACATCAAGAACCAGGACCAAGTGGCCTCTACCATT GAGAGCTGCTACGAGCAGATTCGCTCCTTTGTGAACAAGGCCCTGGAGCA GGAGAACTTGCCTGCGCTGAGTGATGCCGACCAGGCGGCGCTCAAGAACC AGGTGCTTAAGCTGGCCAACAAGACGTCGCCGGTGCCCAGTTTGATGGCC AAACGATTGGATGGCTATGTGCGCGTAACACTGCGCTCCAATGGCAGCAT TCCGCCGCCGCCCTCAGGATTCGCGGACTACCAAGAGGAGCTGGTTGCAT TTATCGCCTCGTTCCGTCGTCTGGTGTCCTACAACCACGCCGTGTTCGGG GAGCACTTCCACCAGATACTCAACAAAACGCTGCCCGGTGAGGAAACGGA GGCTACCACTTCCACGGCCAGTGGCATAAATCCTGGCCAGGCTCAGACTG CCAAGCCTTAGGTGGATTTGTCTACCGTCTTAGGCAACACAAGATACCAG TATACAACACTCAGACACACCTGTAGGCGAACAACAGATCTGGCGGAGAT CTGCATGATGTTAGGGCAACCGGAGTGGCGGATAGCATCTTCCGTGTGGA GGAGGAGGGATTCCGCATTCCGCAGCTGCTTTCCCATGTGACGTGACACT TGCGTAGAAAATTTGACGCACGCACCCGTAACCACCAAGTAGAAATGAGT ACTCCAGATGCAAATCCCCCTGCAAAAAAGCCAGTGGGATCCGAGGCATC TGAAAGGAATCAAAAATGTGCTGGAGCGTCTGTGATAACAAGAATATTCA ACACAAAATTCAAATTTTTGGGGGTTAAGAAAAGTGAACTCGTGAATTAT GTGTGCTCCTCAATTTTCGTAATGTAAACCCCCTCTTTATAGTACATACA TATATATATATATTATGATTATACACGTGTACCCTAACCCCGGACTAATC CTATATCTTAGACCTTTGTGACCGTAACTCCCATTGAATTTATTTTGATT GTTTCGATTGATTAGCAGTGTTTCGACTGAATCTTCACGAATATATCTAT ACCTAGTTTACCGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 5774876..5775741 | 1648..2513 | 4300 | 99.8 | Plus |
chrX | 22417052 | chrX | 5773184..5773671 | 208..695 | 2440 | 100 | Plus |
chrX | 22417052 | chrX | 5773734..5774224 | 694..1184 | 2440 | 99.8 | Plus |
chrX | 22417052 | chrX | 5774284..5774585 | 1180..1481 | 1510 | 100 | Plus |
chrX | 22417052 | chrX | 5772252..5772459 | 1..208 | 1040 | 100 | Plus |
chrX | 22417052 | chrX | 5774647..5774813 | 1482..1648 | 820 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 5882526..5883394 | 1648..2516 | 4345 | 100 | Plus |
X | 23542271 | X | 5880834..5881321 | 208..695 | 2440 | 100 | Plus |
X | 23542271 | X | 5881384..5881874 | 694..1184 | 2440 | 99.8 | Plus |
X | 23542271 | X | 5881934..5882235 | 1180..1481 | 1510 | 100 | Plus |
X | 23542271 | X | 5879902..5880109 | 1..208 | 1040 | 100 | Plus |
X | 23542271 | X | 5882297..5882463 | 1482..1648 | 835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 5890624..5891492 | 1648..2516 | 4345 | 100 | Plus |
X | 23527363 | X | 5888932..5889419 | 208..695 | 2440 | 100 | Plus |
X | 23527363 | X | 5889482..5889972 | 694..1184 | 2440 | 99.7 | Plus |
X | 23527363 | X | 5890032..5890333 | 1180..1481 | 1510 | 100 | Plus |
X | 23527363 | X | 5888000..5888207 | 1..208 | 1040 | 100 | Plus |
X | 23527363 | X | 5890395..5890561 | 1482..1648 | 835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5772252..5772458 | 1..207 | 100 | -> | Plus |
chrX | 5773184..5773671 | 208..695 | 100 | -> | Plus |
chrX | 5773736..5774220 | 696..1180 | 100 | -> | Plus |
chrX | 5774285..5774585 | 1181..1481 | 100 | -> | Plus |
chrX | 5774647..5774813 | 1482..1648 | 99 | -> | Plus |
chrX | 5774877..5775741 | 1649..2513 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16721-RA | 1..1485 | 427..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16721-RA | 1..1485 | 427..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16721-RB | 1..1485 | 427..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16721-RA | 1..1485 | 427..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16721-RB | 1..1485 | 427..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16721-RA | 45..2557 | 1..2513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16721-RA | 45..2557 | 1..2513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16721-RA | 34..2546 | 1..2513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16721-RA | 45..2557 | 1..2513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16721-RA | 34..2546 | 1..2513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5879902..5880108 | 1..207 | 100 | -> | Plus |
X | 5880834..5881321 | 208..695 | 100 | -> | Plus |
X | 5881386..5881870 | 696..1180 | 100 | -> | Plus |
X | 5881935..5882235 | 1181..1481 | 100 | -> | Plus |
X | 5882297..5882463 | 1482..1648 | 100 | -> | Plus |
X | 5882527..5883391 | 1649..2513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5879902..5880108 | 1..207 | 100 | -> | Plus |
X | 5880834..5881321 | 208..695 | 100 | -> | Plus |
X | 5881386..5881870 | 696..1180 | 100 | -> | Plus |
X | 5881935..5882235 | 1181..1481 | 100 | -> | Plus |
X | 5882297..5882463 | 1482..1648 | 100 | -> | Plus |
X | 5882527..5883391 | 1649..2513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5879902..5880108 | 1..207 | 100 | -> | Plus |
X | 5880834..5881321 | 208..695 | 100 | -> | Plus |
X | 5881386..5881870 | 696..1180 | 100 | -> | Plus |
X | 5881935..5882235 | 1181..1481 | 100 | -> | Plus |
X | 5882297..5882463 | 1482..1648 | 100 | -> | Plus |
X | 5882527..5883391 | 1649..2513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5773935..5774141 | 1..207 | 100 | -> | Plus |
arm_X | 5774867..5775354 | 208..695 | 100 | -> | Plus |
arm_X | 5775419..5775903 | 696..1180 | 100 | -> | Plus |
arm_X | 5775968..5776268 | 1181..1481 | 100 | -> | Plus |
arm_X | 5776330..5776496 | 1482..1648 | 100 | -> | Plus |
arm_X | 5776560..5777424 | 1649..2513 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5888000..5888206 | 1..207 | 100 | -> | Plus |
X | 5888932..5889419 | 208..695 | 100 | -> | Plus |
X | 5889484..5889968 | 696..1180 | 100 | -> | Plus |
X | 5890033..5890333 | 1181..1481 | 100 | -> | Plus |
X | 5890395..5890561 | 1482..1648 | 100 | -> | Plus |
X | 5890625..5891489 | 1649..2513 | 100 | Plus |
Translation from 426 to 1910
> LD23868.pep MDAQENRSEQSGQSGDHEEHEERRIRTDSESSVESMTRFVLPSLDGTPPK IVTLDEVSSMFKNLRNMELAHEIALNPDFKLQKYEPPSDSLEGAIKKMVH KAFWDLLRVQLDRQPPSYDQAIRLLAEIKECFPQLLSPNNERALAHINEV LDDSVIRQQAERGTLDFRAYANFVINILSRSCSPARDEAVAALRKIDDVV DTFRCILELMTLMKLDMANFMLRLARTEIAANSVQYEKEKFSKYLREFHG NVGFPATEDWLQRHRSGSSDDETIYNAYMQLIDYPADKEFPELLRIDKER FAGLSWRAQRLILCASLISVAQGMPIISQRRENRIKLAQQLDIIVQDIKN QDQVASTIESCYEQIRSFVNKALEQENLPALSDADQAALKNQVLKLANKT SPVPSLMAKRLDGYVRVTLRSNGSIPPPPSGFADYQEELVAFIASFRRLV SYNHAVFGEHFHQILNKTLPGEETEATTSTASGINPGQAQTAKP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21216-PA | 500 | GF21216-PA | 1..500 | 1..494 | 2173 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18796-PA | 494 | GG18796-PA | 1..494 | 1..494 | 2472 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24639-PA | 486 | GH24639-PA | 1..464 | 1..467 | 1821 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16721-PC | 494 | CG16721-PC | 1..494 | 1..494 | 2514 | 100 | Plus |
CG16721-PA | 494 | CG16721-PA | 1..494 | 1..494 | 2514 | 100 | Plus |
CG16721-PB | 494 | CG16721-PB | 1..494 | 1..494 | 2514 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21686-PA | 490 | GI21686-PA | 1..490 | 1..494 | 1857 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19690-PA | 570 | GL19690-PA | 137..570 | 60..494 | 1616 | 69.7 | Plus |
Dper\GL19693-PA | 427 | GL19693-PA | 1..427 | 67..494 | 1597 | 69.7 | Plus |
Dper\GL22407-PA | 469 | GL22407-PA | 38..469 | 60..494 | 1594 | 69 | Plus |
Dper\GL15173-PA | 436 | GL15173-PA | 20..436 | 26..494 | 1373 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14105-PA | 487 | GA14105-PA | 20..487 | 26..494 | 1778 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12446-PA | 494 | GM12446-PA | 1..494 | 1..494 | 2561 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16762-PA | 495 | GD16762-PA | 1..495 | 1..494 | 2556 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15865-PA | 515 | GJ15865-PA | 1..470 | 1..471 | 1820 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16258-PA | 490 | GK16258-PA | 17..490 | 22..494 | 1906 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17557-PA | 494 | GE17557-PA | 1..494 | 1..494 | 2442 | 93.9 | Plus |
Translation from 426 to 1910
> LD23868.hyp MDAQENRSEQSGQSGDHEEHEERRIRTDSESSVESMTRFVLPSLDGTPPK IVTLDEVSSMFKNLRNMELAHEIALNPDFKLQKYEPPSDSLEGAIKKMVH KAFWDLLRVQLDRQPPSYDQAIRLLAEIKECFPQLLSPNNERALAHINEV LDDSVIRQQAERGTLDFRAYANFVINILSRSCSPARDEAVAALRKIDDVV DTFRCILELMTLMKLDMANFMLRLARTEIAANSVQYEKEKFSKYLREFHG NVGFPATEDWLQRHRSGSSDDETIYNAYMQLIDYPADKEFPELLRIDKER FAGLSWRAQRLILCASLISVAQGMPIISQRRENRIKLAQQLDIIVQDIKN QDQVASTIESCYEQIRSFVNKALEQENLPALSDADQAALKNQVLKLANKT SPVPSLMAKRLDGYVRVTLRSNGSIPPPPSGFADYQEELVAFIASFRRLV SYNHAVFGEHFHQILNKTLPGEETEATTSTASGINPGQAQTAKP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16721-PC | 494 | CG16721-PC | 1..494 | 1..494 | 2514 | 100 | Plus |
CG16721-PA | 494 | CG16721-PA | 1..494 | 1..494 | 2514 | 100 | Plus |
CG16721-PB | 494 | CG16721-PB | 1..494 | 1..494 | 2514 | 100 | Plus |