BDGP Sequence Production Resources |
Search the DGRC for LD23875
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 238 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10565-RA |
Protein status: | LD23875.pep: gold |
Preliminary Size: | 2344 |
Sequenced Size: | 2248 |
Gene | Date | Evidence |
---|---|---|
CG10565 | 2001-01-01 | Release 2 assignment |
CG10565 | 2001-11-29 | Blastp of sequenced clone |
CG10565 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10565 | 2008-04-29 | Release 5.5 accounting |
CG10565 | 2008-08-15 | Release 5.9 accounting |
CG10565 | 2008-12-18 | 5.12 accounting |
2248 bp (2248 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069523
> LD23875.complete ACCACTAGTCGAAAAACATGCGGTGCTGCGGAAAAGTGTGATTATTAATT GGATTTCGACGTTTTGAAGGCAGCGGATCGCCAAATTTTGAGTAACGTGA ATCCACAGGAGTGGCGGTGAATGCCCATTAACCAGCGGACCTGACCAGAG ATGACGAGCGGTACGGTAGCAACGGCGGTGGAGGTGCAGCTGCCGCTCAA GGTCGTTCGCCGTAAAATCGAGCGCGTTGGCTTCGCTTACTTTGCGCAAC GGCGCCAATTTCTAGCTCCCGGCGGCGTGGAGCGCAGCGAAAGCGATGAG AAATTGGAGGGCGTGGGCGAGGAGGTGGACATCAGCTACCTAAAGTCGCT GGATCCTAAGGAGTGGAAGGACCAGGATCATTACGCCGTTCTTGGCTTGG GCAAGCTCCGATACGAGGCCAGCGAGGATGATGTTCGACGGGCTTACAGG CGCATGGTTCTGCTGCACCATCCCGATAAGCGGAAAGCCAAGGGCGAGGA AGTCATCCAGGACGATGATTACTTCACATGCATAACCAAAGCTTACGAGA TACTGGGCACATCCAAGCCGCGCCGCAGCTTTGACTCAGTGGATCCCGAG TTTGACGACTCGCTGCCCTCACAGAACGACATCGATAACGACTACTTTGG CGTATTTAACAAATTTTTCACACTTAACGGGCGCTGGAGCGAAAAGCCGC ATGTTCCCTCCTTCGGGCAGGTGGACGCCAAACGCGAAGAGGTGGAGCGC TTCTACAACTTCTGGTACGATTTTAAGTCATGGCGGGAATTCAGCTACTT GGACGAAGAGGACAAGGAGAAGGGCCAGGACCGCGACGAACGTCGCTGGA TCGAAAAGGAGAACAGGGCGGCTCGAATCAAGCGCAAGAAGGAGGAAATG TCTCGTATCCGGTCGCTCGTCGATTTAGCCTACAACAATGATAAGCGCAT TCAGCGCTTCAAGCAGGAGGAAAAGGATCGCAAGGCTGCTGCCAAGCGAG CCAAGATGGACGCCGCCCAGGCCCAGAAGGCAGAAGCTGATCGTGCCATC CGTGAAGCGGCTTTGGCCAAGGAGAAGGCTGAAAAGGCCGAGCAGAAACG CATCGAGCAGATCCGCATCGAACGCGAGCAGCAGAAAAAGCTGCTTAAGA AGGAGCGCAAAACGCTGCGCGACAAGGTCAAGGACTGCAAGTATTATGCC AAGAACGACAAGGATCAGCTGAAGCACATGGAGGGCACCGAGAAGATTTG CGAGACCTTCAATCTGGCAGAGCTGCAAGCTCTAAATAAGGCAATGGAAA GCAAGGGCCGTGAGTCGTTTGTTGCTGCCCTTCAAACGGCCGAGCAGAAG ATAGCTGCCGAGTTGGAGGAGATTAACCAGACACAGGCCAAGAAGCTTGC CAGCTCAGCGGCCACGCCAAAAGGCGTTAAGGAGGTCAAGAAGAATGAGC TCTGGAGCAATGAGAACGTGCAGTTGCTTATCAAGGCGGTTAATCTGTTT CCCGCTGGCACTGCACAGCGTTGGGATGTCATAGCCACTTTCATTAACCA GCATAGCCCGGATAACACTGTTCTGGTCAATGCCAGGGATGTGCTCAACA AAGCCAAGGCGCTCCAGAACACAGATCACTCGAAGAGCTCCCTGAAGACT CAAGCCAACGATGCGGCATTTGCCAGTTTCGAGAAGTCCAAGAAAGATGT TCAGACGTGTAAGGATATAACCCTGGGCGAGGAGACGGCCCAGGCGAGCA AGGAGAACTTGAAACAAAACGGTGTAGATCATAAGGCGAACAATCAGTCA ACCAAGCAGAATGGCACGGCTCCAGCTCCAGCAAACCCCACGGCTGCACC AGCCCCAGTTCCGGCCACAAATGGGTCTACGGGCGGCGGTGCTGCCTCCA AAACCTGGACCAAGGAGGAGCAAGCCCTGCTCGAACAGGCCATTAAAACC TATCCAACGACGACACCCGATCGCTGGGATTGCATCGCCGCCTGCATACC GAATCGCAGTAAAAAGGACTGCTTACGTCGCGTCAAAGAGCTGGTCGAGC TGGTTAACTCCAAGAAGGAGGCACAGGCGGCGGTCAAATGAGTGCGGCTC CTGCTCCACTTTACCTGCCTCTCGTCCGCCTCATCCACTTCTAGCTGCTG TGTCCCATATAAATTTTATTTAAATAAAACATAAAAAGTTTTTGAACGTT TAGCGAAAAGTTAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21122258..21123915 | 2213..556 | 8290 | 100 | Minus |
chr3L | 24539361 | chr3L | 21124627..21125036 | 410..1 | 2035 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 21124372..21124519 | 557..410 | 740 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21133249..21134906 | 2213..556 | 8290 | 100 | Minus |
3L | 28110227 | 3L | 21135618..21136027 | 410..1 | 2035 | 99.8 | Minus |
3L | 28110227 | 3L | 21135363..21135510 | 557..410 | 740 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21126349..21128006 | 2213..556 | 8290 | 100 | Minus |
3L | 28103327 | 3L | 21128718..21129127 | 410..1 | 2035 | 99.7 | Minus |
3L | 28103327 | 3L | 21128463..21128610 | 557..410 | 740 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21122259..21123914 | 557..2212 | 98 | <- | Minus |
chr3L | 21124373..21124518 | 411..556 | 100 | <- | Minus |
chr3L | 21124627..21125036 | 1..410 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10565-RA | 1..1941 | 151..2091 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10565-RA | 1..1941 | 151..2091 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10565-RA | 1..1941 | 151..2091 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10565-RA | 1..1941 | 151..2091 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10565-RA | 1..1941 | 151..2091 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10565-RA | 15..2226 | 1..2212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10565-RA | 15..2226 | 1..2212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10565-RA | 26..2237 | 1..2212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10565-RA | 15..2226 | 1..2212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10565-RA | 26..2237 | 1..2212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21133250..21134905 | 557..2212 | 100 | <- | Minus |
3L | 21135364..21135509 | 411..556 | 100 | <- | Minus |
3L | 21135618..21136027 | 1..410 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21133250..21134905 | 557..2212 | 100 | <- | Minus |
3L | 21135364..21135509 | 411..556 | 100 | <- | Minus |
3L | 21135618..21136027 | 1..410 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21133250..21134905 | 557..2212 | 100 | <- | Minus |
3L | 21135364..21135509 | 411..556 | 100 | <- | Minus |
3L | 21135618..21136027 | 1..410 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21126350..21128005 | 557..2212 | 100 | <- | Minus |
arm_3L | 21128464..21128609 | 411..556 | 100 | <- | Minus |
arm_3L | 21128718..21129127 | 1..410 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21126350..21128005 | 557..2212 | 100 | <- | Minus |
3L | 21128464..21128609 | 411..556 | 100 | <- | Minus |
3L | 21128718..21129127 | 1..410 | 99 | Minus |
Translation from 150 to 2090
> LD23875.pep MTSGTVATAVEVQLPLKVVRRKIERVGFAYFAQRRQFLAPGGVERSESDE KLEGVGEEVDISYLKSLDPKEWKDQDHYAVLGLGKLRYEASEDDVRRAYR RMVLLHHPDKRKAKGEEVIQDDDYFTCITKAYEILGTSKPRRSFDSVDPE FDDSLPSQNDIDNDYFGVFNKFFTLNGRWSEKPHVPSFGQVDAKREEVER FYNFWYDFKSWREFSYLDEEDKEKGQDRDERRWIEKENRAARIKRKKEEM SRIRSLVDLAYNNDKRIQRFKQEEKDRKAAAKRAKMDAAQAQKAEADRAI REAALAKEKAEKAEQKRIEQIRIEREQQKKLLKKERKTLRDKVKDCKYYA KNDKDQLKHMEGTEKICETFNLAELQALNKAMESKGRESFVAALQTAEQK IAAELEEINQTQAKKLASSAATPKGVKEVKKNELWSNENVQLLIKAVNLF PAGTAQRWDVIATFINQHSPDNTVLVNARDVLNKAKALQNTDHSKSSLKT QANDAAFASFEKSKKDVQTCKDITLGEETAQASKENLKQNGVDHKANNQS TKQNGTAPAPANPTAAPAPVPATNGSTGGGAASKTWTKEEQALLEQAIKT YPTTTPDRWDCIAACIPNRSKKDCLRRVKELVELVNSKKEAQAAVK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10188-PA | 656 | GF10188-PA | 19..656 | 13..646 | 2894 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13262-PA | 647 | GG13262-PA | 1..647 | 1..646 | 3218 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17000-PA | 653 | GH17000-PA | 1..653 | 6..646 | 2630 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10565-PB | 646 | CG10565-PB | 1..646 | 1..646 | 3321 | 100 | Plus |
CG10565-PA | 646 | CG10565-PA | 1..646 | 1..646 | 3321 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11414-PA | 651 | GI11414-PA | 1..651 | 6..646 | 2664 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20759-PA | 658 | GL20759-PA | 1..658 | 6..646 | 2731 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10399-PA | 658 | GA10399-PA | 1..658 | 6..646 | 2733 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22166-PA | 642 | GM22166-PA | 1..642 | 1..646 | 3289 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12143-PA | 648 | GD12143-PA | 1..648 | 1..646 | 3348 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13609-PA | 636 | GJ13609-PA | 12..636 | 16..646 | 2696 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12316-PA | 666 | GK12316-PA | 1..666 | 6..646 | 2674 | 77.1 | Plus |
Translation from 150 to 2090
> LD23875.hyp MTSGTVATAVEVQLPLKVVRRKIERVGFAYFAQRRQFLAPGGVERSESDE KLEGVGEEVDISYLKSLDPKEWKDQDHYAVLGLGKLRYEASEDDVRRAYR RMVLLHHPDKRKAKGEEVIQDDDYFTCITKAYEILGTSKPRRSFDSVDPE FDDSLPSQNDIDNDYFGVFNKFFTLNGRWSEKPHVPSFGQVDAKREEVER FYNFWYDFKSWREFSYLDEEDKEKGQDRDERRWIEKENRAARIKRKKEEM SRIRSLVDLAYNNDKRIQRFKQEEKDRKAAAKRAKMDAAQAQKAEADRAI REAALAKEKAEKAEQKRIEQIRIEREQQKKLLKKERKTLRDKVKDCKYYA KNDKDQLKHMEGTEKICETFNLAELQALNKAMESKGRESFVAALQTAEQK IAAELEEINQTQAKKLASSAATPKGVKEVKKNELWSNENVQLLIKAVNLF PAGTAQRWDVIATFINQHSPDNTVLVNARDVLNKAKALQNTDHSKSSLKT QANDAAFASFEKSKKDVQTCKDITLGEETAQASKENLKQNGVDHKANNQS TKQNGTAPAPANPTAAPAPVPATNGSTGGGAASKTWTKEEQALLEQAIKT YPTTTPDRWDCIAACIPNRSKKDCLRRVKELVELVNSKKEAQAAVK*