Clone LD23876 Report

Search the DGRC for LD23876

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:238
Well:76
Vector:pOT2
Associated Gene/TranscriptCG11970-RA
Protein status:LD23876.pep: gold
Preliminary Size:5393
Sequenced Size:5372

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11970 2000-02-14 Blastp of sequenced clone
CG11970 2001-01-01 Release 2 assignment
CG11970 2003-01-01 Sim4 clustering to Release 3
CG11970 2008-04-29 Release 5.5 accounting
CG11970 2008-08-15 Release 5.9 accounting
CG11970 2008-12-18 5.12 accounting

Clone Sequence Records

LD23876.complete Sequence

5372 bp (5372 high quality bases) assembled on 2000-02-14

GenBank Submission: AF145684

> LD23876.complete
CTAACGCTGGCTGATTGATATAACGAGGAAGGACAGCGGCGTAAGAGACA
AAAATTATAAATTAGTGTAGAGAAAAAATCGCTCTTCGCGAAGAAAAATC
TGGTGACAAATCGTTGGCGATCCGATGAGCAACATAAACGTAAACACAGT
GCCCAGGTCGAGTCCAAATGCCAATGGGAATCCAAATGCGAATCCAAATC
GCAGTGTGGCCTCCGAGGAGGAGGAGGGCGATGGCCGGATGAGCGACAGC
GGGAGCAACTCGGCCAGCAGCCAGCTGAGTCGCACGTCGAGCAGCAGCTC
CTCGGACTCGGCGAGTGGTTCACTGGAGGATGACCCGGATGGCGAGGACG
AGGATATGTCCGCCCAGGACGCGGGCAGCGCCTCGGAAACGGAAGACGAC
ACCTCCACCTGCCAGTCGGATGAACTGGAGCTGGCGCAGCTCACTGGTCG
GGATATCTTTCGGTTGCCGCGCGGCTTGTGCGAAAATGCAGCTATTTTTC
ATGAATTCTTCTCTCTTGAGACCTGGCAACAGCTGCCCCATCACCTCCAG
GCCCGACTACAGCCGATGCTTCCGGACTTCTCCCGTTTGGTATCCGGACA
GGCACAGGCCTGTGCGGAACAGCAACGTACACTGGTGCAGCTATTTAATG
GCGGTCTACAGCGTTTCGGGCAATCACCACTGCTTCAGCTACAACGCCAA
CTTGAGGAAGGAAACCTGCGTCCCGATGTCCTTCAGTTGCGGAGGAGCAT
ACAGCATTCGGGCAGAAGGGAATTTCGTTTCCAGCAGGCTGAGCGCCTAA
GTCTGCTAGCCAAGGAGCTCTTTATGTCAAGGGAACAGCTACTCCAGCAT
GCCTACACCTCTGCTCCACCTTCTGATGGTGCTTTTGGTAAAAATCTGCC
AAGGCCACGTTCCCGTAAGAGAAAGCCGCCCACACTGTCGATAGAGAACA
AATTTTGTTCGCAGCGTGCCAAGAAACGCTATGCCCAAGAGCTTCTGGAA
CTAATAGGCTCGCTAGAGGCGAAACCCGGCGACATCAGTGCGGAGGAGGA
GGAAGAGGACGAGGAATGCCGACAGCTTATGGACCGTTTGGCCAAAGGCC
CACAGGAATTCGAATTGGAGGAGACCAAGGCTCCGGAGCCGGCAGGTCCT
GGCAGGCCCTCGAATGCGGCAGATAAGAAATGCATTTACAACACCTTCTT
CAAGCGGCGACCTGGTGTAGACGATGACCTTGTGCTGCGTTCCATGCAGG
CGGAAAAAATTCCCAAGCTTAACGACAAGAATTTCCGGAAGTATCTAAGA
GACTACAAGCGCCGGAAATTAGAACAACCGGAAAGTCCCGAGTTCGATAC
ATCGGAGGTACGGCTGCGCGACATATGCACTCGAGCACAGTTTGTCGGAA
GCTTTAAGCCAGGTCGGAAACCGAAAGCGCTCATGGCACGCCTCAATCCC
GATCCACCGGCTCTGGTGCCGATTGGAGTAACGCCCACGAAAAACGAGTT
TGTAGATGAGGAGCCCATGCTACTGGATGAACCGCAACAACTATACGGCC
GCCGAGCACCGGAAGACCATCCGGAAGAGGACCTGCCGCACAAGGAACCC
CCGCCTATGCCAAAGAAAGTAATGCCCGCTCCAGTTGTTCTTCCACAACC
CGTGCCCAAGCTGGAACCTTTGAATGGACCCATAACAAATCCCAAGGCGA
GTCCCACGACACCAAATCACTCGAACAATCCCATTACTGTTTCTGCAACT
GCTGGACATATCACTGGCAGTCCCACACGGGAAGTGCAGATTCGTCCGCC
AGCCTCACCACGACCCGCCTGCTTTTTCTCTCTGCTGAGGGATCTATTTG
TATCCACACCGCAGCACAGGCTAACATACGGTGAACTGCAAATTTTGTTG
TCCAGCTGGAGGGAAATCAACTCAGATGCCTCAATACCTATCGGGGAATG
GCCACGATTCCGGCCGGATTGGTCTAAGCTGTTGCAATCGGCAATCAACT
TTTTATCGGGCGATTTTTCTTCCGTTCCTGCCGATTATGTTCCCTATATA
GAACACAAAACTCAATTGGGAATCTATCAGTGGATAGGAGCCGGTCGGGA
CTCGGATGCTAGACTCCTCAGCCTGTGTCAGTTTTGGTTGCGAACGCAAA
GGGAGAAACAGTCTCAACTCAGCCCGGTTTTGATTTCGGGTGTTCATCTA
AACTCATTGGTCGATGCTTCACCAACACCACCTCCAAGATGTCCCACCAC
CTGGACTGTGCGGTCGGCAACGCAGGCGGAGATACTTGAATTCCAGAGCC
AAGAGAGAATACGCTTTGAGTATCCGCATCGGCCGTTTACCTATCGTCTC
AATGGGTATGAGAGTGTTGTAGGTCCAGTCAAAGGAATCTATACACAAGG
TCTGCCACTGAACAAAGCAAGGGGTCACGCAGTTATGGTTGATGACCGAC
CTCCATTTGTAACTATCCTGACTCTAGTTCGAGATGCTACCGCACGGCTT
CCCAATGGAGAGGGAACACGCTCTGAGATCTCCGAACTGCTTAAGTGCTC
CCAGTACATCAGTCAACAAGCTGCGGATAATGTGTTACAGACCATCGTCA
GTGGAGCCTTGGATCGAATGCACGGTGGTCCGGATCCCTGCGTGAAGTAT
GATGCCAGGCGAAAGATCTGGATTTATTTGCATCGAAATCGCAGCGAGGC
GGAATTCGAGAAAATGCATCGACATAACCAGTCCTTGGTAAAACAGAAAC
AGCAGCAAAGGAAGCAGCTGAACAGGCCTAAGATACCAGATGACAGATCT
GGTTTAGCTGCGGATCACCAGCAGGAGCAAGTACCCGCCTTGGTTCCAGC
AGTTGCCTCACCGGTTCCAGTTTCAGTGCAACAACCAGTAGTTGCTTCTC
TGCAGATGAAGAAACCACTCGCGGTTAAGTGTCCGCCAGTGCCGCCCTTA
AAATATCATGTACCACCAGGTACGCCAATTGGAGGAACGATTATATCAGC
CTCATCGAATATAAATGCAAATCAAATCCCCATGCAGCAGATACAGAAAT
CTCTGTTAAAGCCTGTGGTAGTGCCCAATTCCGCTCCATCCCCCGTACAA
CGGCAATTGGCAACTGGTAAATCTGGCACCTTTGCGATCTCCAAGATCAG
TCCCACGAGAAATACCACGCCCATATTGGTTTCCACTCCCAGTGGCTTGC
AAACAGTGCATGTTGCAACCACTCCAAATCAAGCAGGAGGATCCGCTTCC
CCCACGGTTGCCAAAAAGCTGACCATCAAGAAGCCCGTTCCTAATAACAA
AATAGGAAACTTTATAATACCCCTGGATCAACAGCAAAGCGGGCCGCAGC
AACAGCAGCCGACGCAACAGGGACAGCATGTGAAGGTGCAACCGATTGCT
GGAAAACCCAAGGCACTCACTATCACCCCGCGTCCCCAAATGCCGAAGAA
CATTATTCGTCTGTTGCCCGCTGGAGGAGCCACCGTAACCGGGAACTCAG
TGATAGGTGGCACCAAGCCAAACTCTGTTCAGATCCTTGGTCCCCGCGTA
GTTCCGCAAATCCAGACAGTGCGTCCGGCTCAGCAGAAGATCGGAGCTGT
TTCCATTGTGGCCAACAAACCAGTTACAAGTGTGGCCGCTACAGAAACTG
CAAGTCCTGTGACAATGAGCACTATCAGTTCTCCTGTCCCTGGGGGCGGA
ACGATAGTAAAAATGTCGCCTCAAGCATTTGCCAATCTTCAGCAGCAGCA
GCAACAGCTGAAACAGAAGGTTAACAATGCCAGTCCTGCCCTGAACTCAC
CGCAGCAAAGGATCATTGTGGGCAATACGGCAATTTCCTCGAACAAGAAA
ATCGTATTCCAGTCGCTGGGAAAAGCAGCACCCAAAATACTCACCACATC
GCCAAGTGGCTCGGTAACCAAAGCAACGACAAATTTGTCACCACAGCAGC
AGAGAATTGTGCTGCAGAACTTTAAGCAACCGGTAATAGCTACCAATCAA
TCCGGGACCCTAACGGCAGTGGGAGGAAATGCAACGCGCGTTATTCGAGC
TACTCCAGCCACATCTGTAGGAACTGGAGGAATAGTGGGAGCGGGAAACC
CCCAAACAGCTGGGCAAATCATTACCCTGGATAGTTTGCTACAAAAGCAA
CCTGCTGGAGGGAAACTGCTCACAACCGCTGGCAACAACATCTTCCAGTT
GGCCACTTCCTCGGCGGGAAATGTGATTACACTTAGTCCCAACCAGACGA
CCAAGCAGTTACCCACGATGACACGAATTGTGAGTGCCACCAGTACTACT
CCGGCAACTGGAAACGCGTCGACTGTGGTGCCCAAAATTATTGGAAAAAC
TACTGTGCTTCCGGGAAAACCACTACTACTCCACGCCAAAACATTAAAAC
AGATTGGCGGTAGTAGTGTGCCCACAACCCAGACTACCACAACGACGACA
ACAGCAGTTGCATCAGCGGCAGTGGGAAGCGGCAGTGGAGCAGGTGGAAC
TGTAGTTGCGGGAACGGGAGCGACTAATGCTGCCGGGCGAACAACTCAGA
ATATTGTGATTGGAGGTCAGACAGTGAAGCTTCAGGGAGCGATTTCCGCT
CGAGGTGCCGGCGCACCCGTTCAGACTGTCATTATGGGCAACCAACTGTT
GCGATTAGCCAGTAGCACCAGTAATAGTGGAACTACTTCCACCAGCGGCA
TAACGACGGCACCCAAAACGCTGCTAATAGGACCGCGCTTGGCCAAGAAC
GTACTGGTGGCCAACAAGCAAATCACTAGTACAGCAAACAGCAGCGTTGT
AAACAGCTCCACGACAGCATCTCCAGCTGCGACAGCGACGGCAACGCCTA
GCAACAATCTCGTTTTCGCCGTGCAAGGCAACGGCGGACAGCTCTTCTTC
TCACCGGGACTGCAGGGCATGAACCTAAAGCCACTGTCCAGCTTAAAAGT
GATACCCATGGCTGCAGCATCGGCAAGTGGGGCAGCGGTAGGAGGAAAAA
TCTCTGTGACCACGGCAGCCGGCGAAACAGGAGCAAAAACGCTGACTACA
AAACTAATACCGGCTACGGTTCTCAAGACGGCCACAGGGAGTGGCAACTA
GGAGGCTCAGGAGCGGAGAGGCTTGGTAACCACGTTGAATATCCTTACCG
GTTACACTTTCTTCGATTTTGTTTAAACAACACTTGTAATTTATCTATGT
AAGCAGAAAGATCGCAAATATTGCTTTGTACTAAGTAAATATAATGGACA
ACGATAAGATGTCCCATCCAGCAACCAATTTTATGGAACAGTTTATAAAA
AATAATATATATATATATATATACAGACCCAATAAAACTCAGATGAAACC
AGAAAAAAAAAAAAAAAAAAAA

LD23876.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11970-RA 5557 CG11970-RA 202..5555 1..5354 26770 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:50:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 4812381..4814873 1330..3822 12345 99.7 Plus
chr3R 27901430 chr3R 4810864..4812200 1..1337 6565 99.4 Plus
chr3R 27901430 chr3R 4814945..4815715 3821..4591 3840 99.9 Plus
chr3R 27901430 chr3R 4815779..4816540 4591..5352 3795 99.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:14:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:50:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8986490..8988982 1330..3822 12465 100 Plus
3R 32079331 3R 8984973..8986309 1..1337 6670 99.9 Plus
3R 32079331 3R 8989054..8989824 3821..4591 3855 100 Plus
3R 32079331 3R 8989888..8990651 4591..5354 3820 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:36:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 8727321..8729813 1330..3822 12465 100 Plus
3R 31820162 3R 8725804..8727140 1..1337 6670 99.9 Plus
3R 31820162 3R 8729885..8730655 3821..4591 3855 100 Plus
3R 31820162 3R 8730719..8731482 4591..5354 3820 100 Plus
Blast to na_te.dros performed 2019-03-16 21:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6702..6827 3267..3392 143 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2632..2828 3741..3952 141 58.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2341..2392 3327..3378 134 73.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2790..2880 4434..4530 129 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6733..6792 3319..3378 129 68.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6750..6837 3293..3378 128 65.2 Plus
roo 9092 roo DM_ROO 9092bp 1102..1161 3319..3378 120 66.7 Plus

LD23876.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:50:57 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 4810864..4812193 1..1330 99 -> Plus
chr3R 4812382..4814872 1331..3821 99 -> Plus
chr3R 4814946..4815715 3822..4591 99 -> Plus
chr3R 4815780..4816540 4592..5352 95   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:01:13 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 1..4977 125..5101 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:52:38 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 1..4977 125..5101 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:06:25 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 1..4977 125..5101 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:21:26 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 1..4977 125..5101 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:33:35 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 1..4977 125..5101 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:49:39 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 42..5393 1..5352 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:52:38 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 42..5393 1..5352 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:25 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 46..5397 1..5352 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:21:26 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 42..5393 1..5352 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:33:35 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
CG11970-RA 46..5397 1..5352 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:50:57 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8986491..8988981 1331..3821 100 -> Plus
3R 8984973..8986302 1..1330 100 -> Plus
3R 8989055..8989824 3822..4591 100 -> Plus
3R 8989889..8990649 4592..5352 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:50:57 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8986491..8988981 1331..3821 100 -> Plus
3R 8984973..8986302 1..1330 100 -> Plus
3R 8989055..8989824 3822..4591 100 -> Plus
3R 8989889..8990649 4592..5352 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:50:57 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8986491..8988981 1331..3821 100 -> Plus
3R 8984973..8986302 1..1330 100 -> Plus
3R 8989055..8989824 3822..4591 100 -> Plus
3R 8989889..8990649 4592..5352 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:25 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4810695..4812024 1..1330 100 -> Plus
arm_3R 4812213..4814703 1331..3821 100 -> Plus
arm_3R 4814777..4815546 3822..4591 100 -> Plus
arm_3R 4815611..4816371 4592..5352 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:58:37 Download gff for LD23876.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8725804..8727133 1..1330 100 -> Plus
3R 8727322..8729812 1331..3821 100 -> Plus
3R 8729886..8730655 3822..4591 100 -> Plus
3R 8730720..8731480 4592..5352 100   Plus

LD23876.pep Sequence

Translation from 124 to 5100

> LD23876.pep
MSNINVNTVPRSSPNANGNPNANPNRSVASEEEEGDGRMSDSGSNSASSQ
LSRTSSSSSSDSASGSLEDDPDGEDEDMSAQDAGSASETEDDTSTCQSDE
LELAQLTGRDIFRLPRGLCENAAIFHEFFSLETWQQLPHHLQARLQPMLP
DFSRLVSGQAQACAEQQRTLVQLFNGGLQRFGQSPLLQLQRQLEEGNLRP
DVLQLRRSIQHSGRREFRFQQAERLSLLAKELFMSREQLLQHAYTSAPPS
DGAFGKNLPRPRSRKRKPPTLSIENKFCSQRAKKRYAQELLELIGSLEAK
PGDISAEEEEEDEECRQLMDRLAKGPQEFELEETKAPEPAGPGRPSNAAD
KKCIYNTFFKRRPGVDDDLVLRSMQAEKIPKLNDKNFRKYLRDYKRRKLE
QPESPEFDTSEVRLRDICTRAQFVGSFKPGRKPKALMARLNPDPPALVPI
GVTPTKNEFVDEEPMLLDEPQQLYGRRAPEDHPEEDLPHKEPPPMPKKVM
PAPVVLPQPVPKLEPLNGPITNPKASPTTPNHSNNPITVSATAGHITGSP
TREVQIRPPASPRPACFFSLLRDLFVSTPQHRLTYGELQILLSSWREINS
DASIPIGEWPRFRPDWSKLLQSAINFLSGDFSSVPADYVPYIEHKTQLGI
YQWIGAGRDSDARLLSLCQFWLRTQREKQSQLSPVLISGVHLNSLVDASP
TPPPRCPTTWTVRSATQAEILEFQSQERIRFEYPHRPFTYRLNGYESVVG
PVKGIYTQGLPLNKARGHAVMVDDRPPFVTILTLVRDATARLPNGEGTRS
EISELLKCSQYISQQAADNVLQTIVSGALDRMHGGPDPCVKYDARRKIWI
YLHRNRSEAEFEKMHRHNQSLVKQKQQQRKQLNRPKIPDDRSGLAADHQQ
EQVPALVPAVASPVPVSVQQPVVASLQMKKPLAVKCPPVPPLKYHVPPGT
PIGGTIISASSNINANQIPMQQIQKSLLKPVVVPNSAPSPVQRQLATGKS
GTFAISKISPTRNTTPILVSTPSGLQTVHVATTPNQAGGSASPTVAKKLT
IKKPVPNNKIGNFIIPLDQQQSGPQQQQPTQQGQHVKVQPIAGKPKALTI
TPRPQMPKNIIRLLPAGGATVTGNSVIGGTKPNSVQILGPRVVPQIQTVR
PAQQKIGAVSIVANKPVTSVAATETASPVTMSTISSPVPGGGTIVKMSPQ
AFANLQQQQQQLKQKVNNASPALNSPQQRIIVGNTAISSNKKIVFQSLGK
AAPKILTTSPSGSVTKATTNLSPQQQRIVLQNFKQPVIATNQSGTLTAVG
GNATRVIRATPATSVGTGGIVGAGNPQTAGQIITLDSLLQKQPAGGKLLT
TAGNNIFQLATSSAGNVITLSPNQTTKQLPTMTRIVSATSTTPATGNAST
VVPKIIGKTTVLPGKPLLLHAKTLKQIGGSSVPTTQTTTTTTTAVASAAV
GSGSGAGGTVVAGTGATNAAGRTTQNIVIGGQTVKLQGAISARGAGAPVQ
TVIMGNQLLRLASSTSNSGTTSTSGITTAPKTLLIGPRLAKNVLVANKQI
TSTANSSVVNSSTTASPAATATATPSNNLVFAVQGNGGQLFFSPGLQGMN
LKPLSSLKVIPMAAASASGAAVGGKISVTTAAGETGAKTLTTKLIPATVL
KTATGSGN*

LD23876.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:21:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16572-PA 1621 GF16572-PA 3..1621 2..1658 5189 70.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:21:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13985-PA 1659 GG13985-PA 1..1659 1..1658 6888 91.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:21:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19376-PA 1669 GH19376-PA 102..893 91..872 2514 61.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG11970-PB 1658 CG11970-PB 1..1658 1..1658 8462 100 Plus
CG11970-PA 1658 CG11970-PA 1..1658 1..1658 8462 100 Plus
dom-PD 3183 CG9696-PD 2377..2903 1145..1651 212 24.4 Plus
dom-PA 3198 CG9696-PA 2377..2903 1145..1651 212 24.4 Plus
dom-PG 3233 CG9696-PG 2412..2938 1145..1651 212 24.4 Plus
Sgs1-PA 1286 CG3047-PA 342..938 984..1585 189 20.4 Plus
CG46026-PA 666 CG46026-PA 136..644 1093..1577 188 20.1 Plus
CG46026-PA 666 CG46026-PA 157..654 983..1532 188 20.5 Plus
Sgs1-PA 1286 CG3047-PA 402..969 985..1576 177 18.9 Plus
mip120-PA 950 CG6061-PA 65..552 1104..1569 167 22.8 Plus
mip120-PB 952 CG6061-PB 67..554 1104..1569 167 22.8 Plus
CG46026-PA 666 CG46026-PA 135..551 1257..1656 166 22.6 Plus
Sgs1-PA 1286 CG3047-PA 104..778 875..1585 166 19.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:21:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22578-PA 1652 GI22578-PA 94..1648 97..1655 3631 54.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:21:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12109-PA 1516 GL12109-PA 1..1516 131..1658 4160 62.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:22:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11303-PA 1640 GA11303-PA 67..1640 78..1658 4388 62.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:22:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23774-PA 1658 GM23774-PA 1..1658 1..1658 8381 96.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:22:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18583-PA 922 GD18583-PA 1..916 1..916 4825 97.2 Plus
Dsim\GD18584-PA 711 GD18584-PA 9..711 956..1658 2783 94.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:22:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10300-PA 1622 GJ10300-PA 80..1618 81..1655 3763 54.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:22:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13785-PA 1642 GK13785-PA 95..1630 94..1651 3911 55.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:22:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25917-PA 1662 GE25917-PA 1..1662 1..1658 7043 92.4 Plus

LD23876.hyp Sequence

Translation from 124 to 5100

> LD23876.hyp
MSNINVNTVPRSSPNANGNPNANPNRSVASEEEEGDGRMSDSGSNSASSQ
LSRTSSSSSSDSASGSLEDDPDGEDEDMSAQDAGSASETEDDTSTCQSDE
LELAQLTGRDIFRLPRGLCENAAIFHEFFSLETWQQLPHHLQARLQPMLP
DFSRLVSGQAQACAEQQRTLVQLFNGGLQRFGQSPLLQLQRQLEEGNLRP
DVLQLRRSIQHSGRREFRFQQAERLSLLAKELFMSREQLLQHAYTSAPPS
DGAFGKNLPRPRSRKRKPPTLSIENKFCSQRAKKRYAQELLELIGSLEAK
PGDISAEEEEEDEECRQLMDRLAKGPQEFELEETKAPEPAGPGRPSNAAD
KKCIYNTFFKRRPGVDDDLVLRSMQAEKIPKLNDKNFRKYLRDYKRRKLE
QPESPEFDTSEVRLRDICTRAQFVGSFKPGRKPKALMARLNPDPPALVPI
GVTPTKNEFVDEEPMLLDEPQQLYGRRAPEDHPEEDLPHKEPPPMPKKVM
PAPVVLPQPVPKLEPLNGPITNPKASPTTPNHSNNPITVSATAGHITGSP
TREVQIRPPASPRPACFFSLLRDLFVSTPQHRLTYGELQILLSSWREINS
DASIPIGEWPRFRPDWSKLLQSAINFLSGDFSSVPADYVPYIEHKTQLGI
YQWIGAGRDSDARLLSLCQFWLRTQREKQSQLSPVLISGVHLNSLVDASP
TPPPRCPTTWTVRSATQAEILEFQSQERIRFEYPHRPFTYRLNGYESVVG
PVKGIYTQGLPLNKARGHAVMVDDRPPFVTILTLVRDATARLPNGEGTRS
EISELLKCSQYISQQAADNVLQTIVSGALDRMHGGPDPCVKYDARRKIWI
YLHRNRSEAEFEKMHRHNQSLVKQKQQQRKQLNRPKIPDDRSGLAADHQQ
EQVPALVPAVASPVPVSVQQPVVASLQMKKPLAVKCPPVPPLKYHVPPGT
PIGGTIISASSNINANQIPMQQIQKSLLKPVVVPNSAPSPVQRQLATGKS
GTFAISKISPTRNTTPILVSTPSGLQTVHVATTPNQAGGSASPTVAKKLT
IKKPVPNNKIGNFIIPLDQQQSGPQQQQPTQQGQHVKVQPIAGKPKALTI
TPRPQMPKNIIRLLPAGGATVTGNSVIGGTKPNSVQILGPRVVPQIQTVR
PAQQKIGAVSIVANKPVTSVAATETASPVTMSTISSPVPGGGTIVKMSPQ
AFANLQQQQQQLKQKVNNASPALNSPQQRIIVGNTAISSNKKIVFQSLGK
AAPKILTTSPSGSVTKATTNLSPQQQRIVLQNFKQPVIATNQSGTLTAVG
GNATRVIRATPATSVGTGGIVGAGNPQTAGQIITLDSLLQKQPAGGKLLT
TAGNNIFQLATSSAGNVITLSPNQTTKQLPTMTRIVSATSTTPATGNAST
VVPKIIGKTTVLPGKPLLLHAKTLKQIGGSSVPTTQTTTTTTTAVASAAV
GSGSGAGGTVVAGTGATNAAGRTTQNIVIGGQTVKLQGAISARGAGAPVQ
TVIMGNQLLRLASSTSNSGTTSTSGITTAPKTLLIGPRLAKNVLVANKQI
TSTANSSVVNSSTTASPAATATATPSNNLVFAVQGNGGQLFFSPGLQGMN
LKPLSSLKVIPMAAASASGAAVGGKISVTTAAGETGAKTLTTKLIPATVL
KTATGSGN*

LD23876.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:54:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG11970-PB 1658 CG11970-PB 1..1658 1..1658 8462 100 Plus
CG11970-PA 1658 CG11970-PA 1..1658 1..1658 8462 100 Plus
dom-PD 3183 CG9696-PD 2377..2903 1145..1651 212 24.4 Plus
dom-PA 3198 CG9696-PA 2377..2903 1145..1651 212 24.4 Plus
dom-PG 3233 CG9696-PG 2412..2938 1145..1651 212 24.4 Plus