BDGP Sequence Production Resources |
Search the DGRC for LD23884
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 238 |
Well: | 84 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32649-RA |
Protein status: | LD23884.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2261 |
Gene | Date | Evidence |
---|---|---|
CG4410 | 2001-01-01 | Release 2 assignment |
CG32649 | 2001-07-04 | Blastp of sequenced clone |
CG32649 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32649 | 2008-04-29 | Release 5.5 accounting |
CG32649 | 2008-08-15 | Release 5.9 accounting |
CG32649 | 2008-12-18 | 5.12 accounting |
2261 bp (2261 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051692
> LD23884.complete CTTTGAACTTTTTTTGCTGTGATATTTTTACGAGATTTACGTAATCCTAC GCGCCGATCATCACCAGCGAATCACCCACGCGAGAGCAGTGCACAATAAA CCAGTATTTCCTCGCTCCGCGATGTCGCGATCCGCACAAGAAGCTGCGGC GCTGCTGCGGGGACTGCGGATCTTGTTGGAGGCGTGTGGGCGCGAGCATC TCGCCCACGGTCGTCATCTGTGGAGCAATTCAAGCATTCGTGAGCTAATC GCCGAGAATGTGGCGCACACACAGCAGCTGGTGAGAAGTTCCAGTCAAAA TCCCACCGAGGAGCTGAAAAAACTGCAGCAAACTGTAAAAGAAACGGGCG AAAGGGGCTACGTGGTGGCCAAAGGTATTTGCTCGCTGCTGGAGACGAAA ATCAAGATGTCCCGCGAGGAATCGGCCATCTCTGAGCCTGCACAAGTCTC CTCAATTCGTAAATCCACACCCACGGCACAAAATCCAGCAAGTTGGGACG CCGCCAACTTGGATATATCATCCATAACGCTGCAGGAGTTCGAGGAGATA CTCTCGCGCCGGAACAAAGATCGTAGTGTTAGCTTGCGCACCCCGGCAAC CAAAAGCAACCAGACCATGCCCAAAAAAGAAACGTCAACCAATCCGGGCA TCATTACCCAGGACACGGAGTATGTAAACAATGTGCTGCGGTTTGTGGCG GGCGCCAAGGTGGAGGAGCAGCCACCAGATGCGCAGCCGAAGAAGAAGTC CGACCAGCCGGCCATTGAAGTGCCCGAACTGAGCAAGGTGGCCAAACAGC GCAAGGTTCCCTCCTCCCGGATAGGCAGAATGGCCTCCTTTGGCGGCCTG TTCGCCGGCCTGGGCCTGGGAACCCTCAACGAGCTGACCAAGGGTGCACT CGGCCTGGGCGGTTCGACCAGCATGCGAGAGGCGTTGCTCAGTCCCGCCA ATGCTGAACGCATCGTGGACACGCTATGCAAGGTGAGAGGAGCTGCCCTG AAGATCGGACAAATCCTGAGCATACAAGATTCCAGCGTTGTGTCGCCGCA ACTGGCCAAGGCGTTTGAGCGGGTGCGTCAGGCGGCGGACTATATGCCCG ATTGGCAGGTCGAACGCGTGATGAACACCCAATTGGGTGCCGATTGGCGA CAGCGTCTCAAGAGTTTCGAGGACAAACCCTTTGCGGCTGCCTCCATTGG CCAGGTGCATCGGGCAACGCTGAGCGATGGCATGGATGTGGCCATTAAGA TCCAATATCCCGGTGTCGCCCAGAGCATCGAGAGCGACATTGACAATTTG GTGGGCATGCTGAAGGTGTGGGATGTCTTTCCACAGGGTTTCTTCATCGA CAATGTGGTGCGCGTGGCCAAACGTGAGTTGCAATGGGAGGTGGACTATG ATCGCGAGGCGGAATACACGGAGAAGTTTCGCGAAATGATCGCGCCCTAT CCCGAGTACTATGTACCGCGTGTGGTGCGCGATCTGACCACGTCCAGCGT TCTGACCACCGAACTGGTGCCCGGTGTGCCGCTCGATAAGTGTTTCGATC TGAGCTACGAGCATCGCCGCCACATAGCCGCATCCGTGCTGAAGCTCTGC CTGCGCGAGCTCTTCGAGATTGAGTGCATGCAGACGGATCCGAATTGGTC CAACTTTCTGTACGATGCGCCCAGTCGCCGGCTAATGCTGATCGACTTCG GTTCGACGCGCTTCTATAGGCATGAATTCATCCGCAACTATCGCCGGGTG ATCATGAGCGCCGCCGAGAACAATCGTCAGGGCGTTTTGGAGATGTCGCG CGAAATGGGCTTCCTAACCGGCTACGAGACGAAGCAAATGGAGCAGGCGC ACGTGGATGCGGTGATGATATTGGGCGAGATCTTTCGCTACGACGGTGAT TTCGATTTCGGTCGACAGAATACCACCGAAAGATTGGCCGCCCTGGTGCC CACAATGGTGGCGCATCGATTGTGCCCGCCGCCCGAGGAGATATACTCCA TTCATCGCAAGCTATCGGGCATTTTCCTGCTGTGCGCGCGTCTGAATGTG CGCATGAATTGCGTGCCCTTCTACAAGGACATCGTTCTGGGGAAGTTCAA GGACTAGTGAGCACAGCTCACCCCTCTTCCCTTGACCATTTTCTTTTTTT TTTTTTTGTCCAATCCAATCCCAGTTGTAAACCATAAGTGCGCTTAATTT GTAAATGCGATTCGCTGCAAGATTACATATGTTAATTTCCCAAAAAAAAA AAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12789682..12790369 | 1555..2241 | 98 | <- | Minus |
chrX | 12790437..12791990 | 1..1554 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32649-RA | 1..1986 | 122..2107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32649-RA | 1..1986 | 122..2107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32649-RA | 1..1986 | 122..2107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32649-RA | 1..1986 | 122..2107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32649-RA | 1..1986 | 122..2107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32649-RA | 1..2242 | 1..2241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32649-RA | 1..2242 | 1..2241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32649-RA | 39..2280 | 1..2241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32649-RA | 1..2242 | 1..2241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32649-RA | 39..2280 | 1..2241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12898768..12899455 | 1555..2241 | 99 | <- | Minus |
X | 12899523..12901076 | 1..1554 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12898768..12899455 | 1555..2241 | 99 | <- | Minus |
X | 12899523..12901076 | 1..1554 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12898768..12899455 | 1555..2241 | 99 | <- | Minus |
X | 12899523..12901076 | 1..1554 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12792801..12793488 | 1555..2241 | 99 | <- | Minus |
arm_X | 12793556..12795109 | 1..1554 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12906866..12907553 | 1555..2241 | 99 | <- | Minus |
X | 12907621..12909174 | 1..1554 | 100 | Minus |
Translation from 121 to 2106
> LD23884.pep MSRSAQEAAALLRGLRILLEACGREHLAHGRHLWSNSSIRELIAENVAHT QQLVRSSSQNPTEELKKLQQTVKETGERGYVVAKGICSLLETKIKMSREE SAISEPAQVSSIRKSTPTAQNPASWDAANLDISSITLQEFEEILSRRNKD RSVSLRTPATKSNQTMPKKETSTNPGIITQDTEYVNNVLRFVAGAKVEEQ PPDAQPKKKSDQPAIEVPELSKVAKQRKVPSSRIGRMASFGGLFAGLGLG TLNELTKGALGLGGSTSMREALLSPANAERIVDTLCKVRGAALKIGQILS IQDSSVVSPQLAKAFERVRQAADYMPDWQVERVMNTQLGADWRQRLKSFE DKPFAAASIGQVHRATLSDGMDVAIKIQYPGVAQSIESDIDNLVGMLKVW DVFPQGFFIDNVVRVAKRELQWEVDYDREAEYTEKFREMIAPYPEYYVPR VVRDLTTSSVLTTELVPGVPLDKCFDLSYEHRRHIAASVLKLCLRELFEI ECMQTDPNWSNFLYDAPSRRLMLIDFGSTRFYRHEFIRNYRRVIMSAAEN NRQGVLEMSREMGFLTGYETKQMEQAHVDAVMILGEIFRYDGDFDFGRQN TTERLAALVPTMVAHRLCPPPEEIYSIHRKLSGIFLLCARLNVRMNCVPF YKDIVLGKFKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20885-PA | 681 | GF20885-PA | 1..681 | 1..661 | 2934 | 80.1 | Plus |
Dana\GF12996-PA | 518 | GF12996-PA | 80..369 | 278..563 | 206 | 24.4 | Plus |
Dana\GF25249-PA | 558 | GF25249-PA | 105..295 | 277..468 | 155 | 24 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19534-PA | 661 | GG19534-PA | 1..661 | 1..661 | 3350 | 93.9 | Plus |
Dere\GG22994-PA | 518 | GG22994-PA | 80..370 | 278..564 | 200 | 24.3 | Plus |
Dere\GG15486-PA | 557 | GG15486-PA | 99..341 | 272..513 | 164 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17620-PA | 692 | GH17620-PA | 1..692 | 1..661 | 2678 | 75 | Plus |
Dgri\GH20324-PA | 441 | GH20324-PA | 79..369 | 278..564 | 239 | 26.7 | Plus |
Dgri\GH14836-PA | 515 | GH14836-PA | 60..319 | 273..527 | 167 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Coq8-PA | 661 | CG32649-PA | 1..661 | 1..661 | 3378 | 100 | Plus |
Adck-PB | 518 | CG3608-PB | 80..369 | 278..563 | 208 | 24.7 | Plus |
Adck-PA | 518 | CG3608-PA | 80..369 | 278..563 | 208 | 24.7 | Plus |
CG7616-PB | 557 | CG7616-PB | 99..339 | 272..511 | 168 | 21.8 | Plus |
CG7616-PA | 557 | CG7616-PA | 99..339 | 272..511 | 168 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16276-PA | 692 | GI16276-PA | 1..692 | 1..661 | 2657 | 74.6 | Plus |
Dmoj\GI19996-PA | 515 | GI19996-PA | 79..368 | 278..563 | 220 | 24.8 | Plus |
Dmoj\GI13688-PA | 559 | GI13688-PA | 65..363 | 239..527 | 168 | 21 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22961-PA | 661 | GL22961-PA | 1..661 | 1..661 | 2861 | 80.1 | Plus |
Dper\GL10232-PA | 517 | GL10232-PA | 80..370 | 278..564 | 210 | 24.7 | Plus |
Dper\GL22769-PA | 559 | GL22769-PA | 19..298 | 220..471 | 161 | 23.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17042-PA | 661 | GA17042-PA | 1..661 | 1..661 | 2859 | 80 | Plus |
Dpse\GA17555-PA | 517 | GA17555-PA | 80..369 | 278..563 | 204 | 24.4 | Plus |
Dpse\GA20483-PA | 559 | GA20483-PA | 19..298 | 220..471 | 165 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11527-PA | 661 | GM11527-PA | 1..661 | 1..661 | 3360 | 96.5 | Plus |
Dsec\GM11887-PA | 518 | GM11887-PA | 80..370 | 278..564 | 195 | 24.3 | Plus |
Dsec\GM25258-PA | 557 | GM25258-PA | 99..341 | 272..513 | 166 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15912-PA | 159 | GD15912-PA | 1..159 | 503..661 | 867 | 97.5 | Plus |
Dsim\GD11885-PA | 518 | GD11885-PA | 80..370 | 278..564 | 201 | 24.7 | Plus |
Dsim\GD14292-PA | 557 | GD14292-PA | 99..341 | 272..513 | 169 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16920-PA | 681 | GJ16920-PA | 1..681 | 1..661 | 2738 | 75.7 | Plus |
Dvir\GJ21245-PA | 515 | GJ21245-PA | 79..368 | 278..563 | 225 | 26.4 | Plus |
Dvir\GJ14030-PA | 554 | GJ14030-PA | 39..398 | 240..558 | 160 | 21.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10272-PA | 695 | GK10272-PA | 1..695 | 1..661 | 2690 | 75.6 | Plus |
Dwil\GK21422-PA | 518 | GK21422-PA | 81..371 | 278..564 | 219 | 26.2 | Plus |
Dwil\GK20341-PA | 468 | GK20341-PA | 17..214 | 273..471 | 161 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16192-PA | 661 | GE16192-PA | 1..661 | 1..661 | 3371 | 94.4 | Plus |
Dyak\GE14431-PA | 520 | GE14431-PA | 80..370 | 278..564 | 201 | 24.7 | Plus |
Dyak\GE21796-PA | 557 | GE21796-PA | 99..341 | 272..513 | 169 | 22.7 | Plus |
Translation from 121 to 2106
> LD23884.hyp MSRSAQEAAALLRGLRILLEACGREHLAHGRHLWSNSSIRELIAENVAHT QQLVRSSSQNPTEELKKLQQTVKETGERGYVVAKGICSLLETKIKMSREE SAISEPAQVSSIRKSTPTAQNPASWDAANLDISSITLQEFEEILSRRNKD RSVSLRTPATKSNQTMPKKETSTNPGIITQDTEYVNNVLRFVAGAKVEEQ PPDAQPKKKSDQPAIEVPELSKVAKQRKVPSSRIGRMASFGGLFAGLGLG TLNELTKGALGLGGSTSMREALLSPANAERIVDTLCKVRGAALKIGQILS IQDSSVVSPQLAKAFERVRQAADYMPDWQVERVMNTQLGADWRQRLKSFE DKPFAAASIGQVHRATLSDGMDVAIKIQYPGVAQSIESDIDNLVGMLKVW DVFPQGFFIDNVVRVAKRELQWEVDYDREAEYTEKFREMIAPYPEYYVPR VVRDLTTSSVLTTELVPGVPLDKCFDLSYEHRRHIAASVLKLCLRELFEI ECMQTDPNWSNFLYDAPSRRLMLIDFGSTRFYRHEFIRNYRRVIMSAAEN NRQGVLEMSREMGFLTGYETKQMEQAHVDAVMILGEIFRYDGDFDFGRQN TTERLAALVPTMVAHRLCPPPEEIYSIHRKLSGIFLLCARLNVRMNCVPF YKDIVLGKFKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32649-PA | 661 | CG32649-PA | 1..661 | 1..661 | 3378 | 100 | Plus |
CG3608-PB | 518 | CG3608-PB | 80..369 | 278..563 | 208 | 24.7 | Plus |
CG3608-PA | 518 | CG3608-PA | 80..369 | 278..563 | 208 | 24.7 | Plus |
CG7616-PB | 557 | CG7616-PB | 99..339 | 272..511 | 168 | 21.8 | Plus |
CG7616-PA | 557 | CG7616-PA | 99..339 | 272..511 | 168 | 21.8 | Plus |