BDGP Sequence Production Resources |
Search the DGRC for LD23909
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 239 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | Mgat1-RA |
Protein status: | LD23909.pep: gold |
Sequenced Size: | 2801 |
Gene | Date | Evidence |
---|---|---|
CG13431 | 2007-09-25 | DGC5 pick |
Mgat1 | 2008-04-29 | Picked prior to 5.5 |
Mgat1 | 2008-08-15 | Release 5.9 accounting |
Mgat1 | 2008-12-18 | 5.12 accounting |
2801 bp assembled on 2008-05-16
GenBank Submission: BT032838
> LD23909.complete TTTACATTTTGAATTTATACAAATTACGACCAAACACGTAACCACTGGTT GTCAGCGGACGCTGGACGAGGCAGCGCGGCAATCGAACTCGTCACTCCAA CCGGCGAACAAGTCAATCGAGCTTCCAGTGCAGCCGCCGAACGTGTAAAA CATTCACAATTCGATTTGCACACACAGATTCGATCCGAATCCAAATCCCG AATCCCCGAGAATCGGCGAAATCTGCCAGCTTGGCGACCGCTGGTGTGTG ACGTGTGACCGGCGACAGCTAGTCATACATATTCAGTAGATGCCGAGGCA TCCGGCTGGGCCCGTGCCCGATGCTGGACACGCTTGTTGGACACGGCTGC TCGACACGGGTGCTCGGCTGTAGAAGAAGGGCCGGCCGAGGTCTTCCAAT CCCACCGAATCCGTATCCAAAACCGATCGCCAATGCCGCTGCATCGCTAG CGACGCACTGCAGCAGACGTCCACCAGTTCCATCAGCACCCCCACCCACC AATTTCCCCCCAAAAAGATGCGAACGCGCAAGGTGCTATTGGTAATTGGC TTTCTGGTTACGTGGACCTATGCCACCTACTACCTGCTGTTGCGCCAAAC GGGCATCCATACGAGCCGGCATCAGTCGCTTCAGGCCTACAAGCTCAACT CGCAGGCTCGCGATGCCAATATGCAAAGCCATCATCTGGCCAAGAACGTG TTTGAGTTCGTCAAGCTGAAGTACTTGGAGAAGCAACCACCGTCGGTGGC ATCCACGCCGCAAATTAGCATAATTGCCGCCGAAATATCGGCGGAGCTGC CGGAGCAGCATGTGGCCAAGTCGGCAACGGCGCGCATTCCAACGAAAACA TATCTGGCCAATGGCGAGCCCGTGTTTCCAGTCGTAGTCTTCGCCTGCAA TCGGGTGTCGGTGAAGAAGTGCATCGATAACTTGGTTCAGTACAGGCCCA GCGTGGAGCAGTTCCCCATTATTGTGTCACAGGACTGCGGCGATGAGCCC ACCAAGGAGGCAATCCTCTCGTATGGCAAACAGGTCACGCTCATCGAGCA GCCTGATCTCAGCGACATCACAGTGCTGCCGAAGGAGAAAAAATTCAAAG GCTACTACAAGATAGCCCGACACTACGGCTGGGCCCTGAACACCACCTTC GCTGTGGGCTTTGAGTTCGTCATAATCGTCGAGGACGATCTGAACGTGGC GCCCGACTTCTTTGAGTACTTCCTGGGCACGCACAAGCTGCTCAAGCAGG ACCCCAGCCTGTGGTGCGTGTCCGCGTGGAATGACAATGGCAAGGCTGCT GTTGTGGACGCCGCGCAGCCGGAGCTGCTCTACCGCACCGATTTCTTTCC CGGTCTCGGCTGGATGCTCACCAAAGATCTGTGGGCCGAGCTGTCGGTCA AATGGCCCAAATCCTTCTGGGATGATTGGATACGTCATCCCGCCCAGCGC AAAGATCGCGTGTGCATTAGGCCCGAAATATCACGCACTCGCACGTTTGG AAAAATAGGCGTTTCCAACGGTTTGTTCTTCGATAAGTATCTGAAGCACA TTAAACTGAGCGAGGACTTTGTGCAGTTTACAAAAATCAATATGAGCTAC CTGCTGAAGGACAATTACGATAACACGTTTCTGCGGCGCGTTTATACGTA TCCCATTGTTACGTACGATGAGCTGCGGCGAAACCTGATTAGAATCGAAG GTCCAGTTCGCATTCAATACACTACTAGGGAGCAGTACAAGCGGACAACT AAGATGCTGGGTCTTATGGATGATTTCAAGAGCGGTGTTCCGCGGACTGC CTACCATGGCATCGTCTCCTTCTACTACAACAAACGGCGCGTGCATCTGG CACCCAACGCCAACTGGAAGGGCTACGAGCTCTCTTGGAGCTAACGACGC TAAGGACAGAGTACCGCCAGCTCCACTTCCATTACCACGCAGCTAGCTCC GCGTGCTTGCAATACCAAAAATAGCCCTATGAGTTTTAATTTTTATTTGA CCAATTAGCTAAGTTGTAACTATGGAATCTCCTCGAACAGTAGACGCTGT TCGCAGCCATCGCGTAGGCAGGAGTACTTGGAGTACTAGCCCTGATTTCT GATAGAAAACGCAATTCGTCTGCTCCAGATCCCTAGCCTACGGACCTACT GTTGGCGTAACAAAATCAAATCAAATGAGTCTCCACTATGTATAGTAGTC AACCGAACCGAACTGTGTGTGGCAAGAGCCAAAAGTGTTCCATTCTAGCA CACCAGCCACACAAGCAACGCAATGAATTGTAAATAAGTCAGTGTCGTTC GCTTTTGTTACAGCTCTCTCTATCTGTCTATCTCTCTCAATTTATCGTGT TAAATTGCAAATAGTTATAGCAATGGTTAAGTTATAGTATGCAGCGTGTA ATTTGTAGCATTTAAGTTGATCCAACTAGAGTTCTAACGGCAACGGACGT GTAATATTTGTGATTTTTGATTATTTAATTTACATTTATTAATTGTTGAG AGCCAGTCAGTAAACAGTACCCGACCCACACAATGTAACATAGAATAGCA ATAACTAGCGCTAGTACTAGTACTAGAACCACAACGTAAACTAGACCAGT GCTGAGCCACCAGGGGTACGCCAGTAATCCCGGCCAGATCTGAAAGTGTG CCACTCTCAGCTAGTTGTAATGGAATCAACCCAGACAGGACACCTACTCT ACTACCCCCTATGACTACACTTTGTATGAGCATATTTTTGTGTGTATGAG AGACGTACGGAACATAAATTCTAAAGACAAAAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 16445926..16446925 | 2778..1779 | 4970 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 16448073..16449055 | 983..1 | 4795 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 16447584..16448019 | 1413..978 | 2090 | 98.6 | Minus |
chr2R | 21145070 | chr2R | 16447419..16447523 | 1518..1414 | 510 | 99 | Minus |
chr2R | 21145070 | chr2R | 16447262..16447353 | 1610..1519 | 460 | 100 | Minus |
chr2R | 21145070 | chr2R | 16446977..16447066 | 1780..1691 | 450 | 100 | Minus |
chr2R | 21145070 | chr2R | 16447123..16447207 | 1692..1608 | 425 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 20559154..20560155 | 2780..1779 | 5010 | 100 | Minus |
2R | 25286936 | 2R | 20561305..20562287 | 983..1 | 4915 | 100 | Minus |
2R | 25286936 | 2R | 20560814..20561248 | 1413..979 | 2175 | 100 | Minus |
2R | 25286936 | 2R | 20560649..20560753 | 1518..1414 | 525 | 100 | Minus |
2R | 25286936 | 2R | 20560492..20560583 | 1610..1519 | 460 | 100 | Minus |
2R | 25286936 | 2R | 20560207..20560296 | 1780..1691 | 450 | 100 | Minus |
2R | 25286936 | 2R | 20560353..20560437 | 1692..1608 | 425 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 20560353..20561354 | 2780..1779 | 5010 | 100 | Minus |
2R | 25260384 | 2R | 20562504..20563486 | 983..1 | 4915 | 100 | Minus |
2R | 25260384 | 2R | 20562013..20562447 | 1413..979 | 2175 | 100 | Minus |
2R | 25260384 | 2R | 20561848..20561952 | 1518..1414 | 525 | 100 | Minus |
2R | 25260384 | 2R | 20561691..20561782 | 1610..1519 | 460 | 100 | Minus |
2R | 25260384 | 2R | 20561406..20561495 | 1780..1691 | 450 | 100 | Minus |
2R | 25260384 | 2R | 20561552..20561636 | 1692..1608 | 425 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 16445926..16446923 | 1781..2778 | 99 | <- | Minus |
chr2R | 16446977..16447064 | 1693..1780 | 100 | <- | Minus |
chr2R | 16447123..16447205 | 1610..1692 | 100 | <- | Minus |
chr2R | 16447263..16447353 | 1519..1609 | 100 | <- | Minus |
chr2R | 16447419..16447523 | 1414..1518 | 99 | <- | Minus |
chr2R | 16447584..16448014 | 983..1413 | 98 | <- | Minus |
chr2R | 16448074..16449055 | 1..982 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgat1-RA | 1..1377 | 518..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgat1-RA | 1..1377 | 518..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgat1-RA | 1..1377 | 518..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgat1-RA | 1..1377 | 518..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgat1-RA | 1..1377 | 518..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgat1-RA | 41..2818 | 1..2778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgat1-RA | 41..2818 | 1..2778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgat1-RA | 45..2822 | 1..2778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgat1-RA | 41..2818 | 1..2778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgat1-RA | 45..2822 | 1..2778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20561306..20562287 | 1..982 | 100 | Minus | |
2R | 20559156..20560153 | 1781..2778 | 100 | <- | Minus |
2R | 20560207..20560294 | 1693..1780 | 100 | <- | Minus |
2R | 20560353..20560435 | 1610..1692 | 100 | <- | Minus |
2R | 20560493..20560583 | 1519..1609 | 100 | <- | Minus |
2R | 20560649..20560753 | 1414..1518 | 100 | <- | Minus |
2R | 20560814..20561244 | 983..1413 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20561306..20562287 | 1..982 | 100 | Minus | |
2R | 20559156..20560153 | 1781..2778 | 100 | <- | Minus |
2R | 20560207..20560294 | 1693..1780 | 100 | <- | Minus |
2R | 20560353..20560435 | 1610..1692 | 100 | <- | Minus |
2R | 20560493..20560583 | 1519..1609 | 100 | <- | Minus |
2R | 20560649..20560753 | 1414..1518 | 100 | <- | Minus |
2R | 20560814..20561244 | 983..1413 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20561306..20562287 | 1..982 | 100 | Minus | |
2R | 20559156..20560153 | 1781..2778 | 100 | <- | Minus |
2R | 20560207..20560294 | 1693..1780 | 100 | <- | Minus |
2R | 20560353..20560435 | 1610..1692 | 100 | <- | Minus |
2R | 20560493..20560583 | 1519..1609 | 100 | <- | Minus |
2R | 20560649..20560753 | 1414..1518 | 100 | <- | Minus |
2R | 20560814..20561244 | 983..1413 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 16448154..16448258 | 1414..1518 | 100 | <- | Minus |
arm_2R | 16446661..16447658 | 1781..2778 | 100 | <- | Minus |
arm_2R | 16447712..16447799 | 1693..1780 | 100 | <- | Minus |
arm_2R | 16447858..16447940 | 1610..1692 | 100 | <- | Minus |
arm_2R | 16447998..16448088 | 1519..1609 | 100 | <- | Minus |
arm_2R | 16448319..16448749 | 983..1413 | 100 | <- | Minus |
arm_2R | 16448811..16449792 | 1..982 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20560355..20561352 | 1781..2778 | 100 | <- | Minus |
2R | 20561406..20561493 | 1693..1780 | 100 | <- | Minus |
2R | 20561552..20561634 | 1610..1692 | 100 | <- | Minus |
2R | 20561692..20561782 | 1519..1609 | 100 | <- | Minus |
2R | 20561848..20561952 | 1414..1518 | 100 | <- | Minus |
2R | 20562013..20562443 | 983..1413 | 100 | <- | Minus |
2R | 20562505..20563486 | 1..982 | 100 | Minus |
Translation from 517 to 1893
> LD23909.pep MRTRKVLLVIGFLVTWTYATYYLLLRQTGIHTSRHQSLQAYKLNSQARDA NMQSHHLAKNVFEFVKLKYLEKQPPSVASTPQISIIAAEISAELPEQHVA KSATARIPTKTYLANGEPVFPVVVFACNRVSVKKCIDNLVQYRPSVEQFP IIVSQDCGDEPTKEAILSYGKQVTLIEQPDLSDITVLPKEKKFKGYYKIA RHYGWALNTTFAVGFEFVIIVEDDLNVAPDFFEYFLGTHKLLKQDPSLWC VSAWNDNGKAAVVDAAQPELLYRTDFFPGLGWMLTKDLWAELSVKWPKSF WDDWIRHPAQRKDRVCIRPEISRTRTFGKIGVSNGLFFDKYLKHIKLSED FVQFTKINMSYLLKDNYDNTFLRRVYTYPIVTYDELRRNLIRIEGPVRIQ YTTREQYKRTTKMLGLMDDFKSGVPRTAYHGIVSFYYNKRRVHLAPNANW KGYELSWS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12760-PA | 456 | GF12760-PA | 1..456 | 1..458 | 2208 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20851-PA | 458 | GG20851-PA | 1..458 | 1..458 | 2416 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22116-PA | 467 | GH22116-PA | 1..467 | 1..458 | 1921 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mgat1-PA | 458 | CG13431-PA | 1..458 | 1..458 | 2432 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19251-PA | 460 | GI19251-PA | 1..460 | 1..458 | 1874 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10391-PA | 455 | GL10391-PA | 1..455 | 1..458 | 2097 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12283-PA | 455 | GA12283-PA | 1..455 | 1..458 | 2100 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19778-PA | 458 | GM19778-PA | 1..458 | 1..458 | 2456 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25269-PA | 458 | GD25269-PA | 1..458 | 1..458 | 2456 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20329-PA | 463 | GJ20329-PA | 1..463 | 1..458 | 1936 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21834-PA | 466 | GK21834-PA | 1..466 | 1..458 | 2041 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13790-PA | 458 | GE13790-PA | 1..458 | 1..458 | 2409 | 97.2 | Plus |
Translation from 517 to 1893
> LD23909.hyp MRTRKVLLVIGFLVTWTYATYYLLLRQTGIHTSRHQSLQAYKLNSQARDA NMQSHHLAKNVFEFVKLKYLEKQPPSVASTPQISIIAAEISAELPEQHVA KSATARIPTKTYLANGEPVFPVVVFACNRVSVKKCIDNLVQYRPSVEQFP IIVSQDCGDEPTKEAILSYGKQVTLIEQPDLSDITVLPKEKKFKGYYKIA RHYGWALNTTFAVGFEFVIIVEDDLNVAPDFFEYFLGTHKLLKQDPSLWC VSAWNDNGKAAVVDAAQPELLYRTDFFPGLGWMLTKDLWAELSVKWPKSF WDDWIRHPAQRKDRVCIRPEISRTRTFGKIGVSNGLFFDKYLKHIKLSED FVQFTKINMSYLLKDNYDNTFLRRVYTYPIVTYDELRRNLIRIEGPVRIQ YTTREQYKRTTKMLGLMDDFKSGVPRTAYHGIVSFYYNKRRVHLAPNANW KGYELSWS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mgat1-PA | 458 | CG13431-PA | 1..458 | 1..458 | 2432 | 100 | Plus |