![]() | BDGP Sequence Production Resources |
Search the DGRC for LD24077
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 240 |
Well: | 77 |
Vector: | pOT2 |
Associated Gene/Transcript | RpS2-RA |
Protein status: | LD24077.pep: gold |
Preliminary Size: | 3700 |
Sequenced Size: | 915 |
Gene | Date | Evidence |
---|---|---|
CG5920 | 2001-01-01 | Release 2 assignment |
CG5920 | 2002-03-29 | Blastp of sequenced clone |
CG5920 | 2003-01-01 | Sim4 clustering to Release 3 |
sop | 2008-04-29 | Release 5.5 accounting |
sop | 2008-08-15 | Release 5.9 accounting |
sop | 2008-12-18 | 5.12 accounting |
915 bp (915 high quality bases) assembled on 2002-03-29
GenBank Submission: AY094799
> LD24077.complete TCACCCCAATAAAGTTGATAGACCTACAAAATGGCGGACGAAGCTCCAGC CCGTAGTGGATTCCGTGGCGGATTTGGCTCTCGTGGTGGTCGTGGTGGAC GCGGTCGTGGCCGTGGACGCTGGGCCCGTGGACGTGGAAAGGAGGACTCC AAGGAGTGGGTGCCAGTGACCAAGCTGGGACGCCTGGTGCGCGAGGGCAA GATCAAGTCTTTGGAGGAGATCTACCTGTACTCGCTTCCCATCAAAGAGT TCGAGATCATCGACTTCTTCCTGGGATCCTCGCTGAAGGATGAGGTGCTG AAGATCATGCCCGTCCAGAAGCAGACCCGTGCTGGTCAGCGTACCCGTTT CAAGGCCTTCGTTGCCATCGGCGACAACAATGGCCACATTGGTCTGGGCG TTAAGTGCAGCAAGGAAGTGGCCACCGCCATCCGTGGTGCCATCATTCTG GCCAAGCTCTCCGTGGTGCCCGTGCGCCGTGGCTACTGGGGCAACAAGAT CGGCAAGCCCCACACCGTGCCCTGCAAGGTCACCGGCAAGTGCGGTTCCG TCTCCGTGCGCCTCATCCCCGCTCCCCGTGGTACTGGCATTGTCTCGGCC CCCGTGCCCAAGAAGCTGCTGACCATGGCCGGTATTGAGGATTGCTACAC CTCGGCCCGTGGCTCCACTGGAACCCTCGGCAACTTCGCCAAGGCTACAT ATGCCGCCATCGCCAAGACGTACGCGTACTTGACCCCCGATCTGTGGAAG GAGATGCCTCTGGGCTCCACTCCTTACCAGGCATACTCGGACTTCCTGTC CAAGCCCACTCCTCGTCTGCACGCCGATGCCTAAGTGAACACTTTCGAGG CCAATCAATCCAGAGTTTTTGAATAAAGTCATAAACTTTTAAATGTAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sop-RA | 1458 | sop-RA | 325..1222 | 1..898 | 4490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 9895191..9896057 | 896..30 | 4335 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9896263..9897131 | 898..30 | 4345 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9895191..9896057 | 30..896 | 100 | <- | Minus |
chr2L | 9896397..9896425 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sop-RA | 1..804 | 31..834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sop-RA | 1..804 | 31..834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS2-RA | 1..804 | 31..834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sop-RA | 1..804 | 31..834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS2-RA | 1..804 | 31..834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sop-RA | 42..937 | 1..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sop-RA | 42..937 | 1..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS2-RA | 21..916 | 1..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sop-RA | 42..937 | 1..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS2-RA | 21..916 | 1..896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9897473..9897501 | 1..29 | 100 | Minus | |
2L | 9896265..9897131 | 30..896 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9897473..9897501 | 1..29 | 100 | Minus | |
2L | 9896265..9897131 | 30..896 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9897473..9897501 | 1..29 | 100 | Minus | |
2L | 9896265..9897131 | 30..896 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9896265..9897131 | 30..896 | 100 | <- | Minus |
arm_2L | 9897473..9897501 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9896265..9897131 | 30..896 | 100 | <- | Minus |
2L | 9897473..9897501 | 1..29 | 100 | Minus |
Translation from 30 to 833
> LD24077.hyp MADEAPARSGFRGGFGSRGGRGGRGRGRGRWARGRGKEDSKEWVPVTKLG RLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTR AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRR GYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMA GIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQ AYSDFLSKPTPRLHADA*
Translation from 30 to 833
> LD24077.pep MADEAPARSGFRGGFGSRGGRGGRGRGRGRWARGRGKEDSKEWVPVTKLG RLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTR AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRR GYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMA GIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQ AYSDFLSKPTPRLHADA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15233-PA | 268 | GF15233-PA | 1..268 | 1..267 | 1354 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24001-PA | 267 | GG24001-PA | 1..267 | 1..267 | 1373 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10440-PA | 268 | GH10440-PA | 1..268 | 1..267 | 1348 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS2-PC | 267 | CG5920-PC | 1..267 | 1..267 | 1396 | 100 | Plus |
RpS2-PB | 267 | CG5920-PB | 1..267 | 1..267 | 1396 | 100 | Plus |
RpS2-PA | 267 | CG5920-PA | 1..267 | 1..267 | 1396 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24366-PA | 268 | GI24366-PA | 1..268 | 1..267 | 1353 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19203-PA | 268 | GL19203-PA | 1..268 | 1..267 | 1345 | 97.4 | Plus |
Dper\GL18987-PA | 387 | GL18987-PA | 38..249 | 37..250 | 1043 | 92.5 | Plus |
Dper\GL13216-PA | 217 | GL13216-PA | 33..216 | 37..267 | 882 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19229-PA | 268 | GA19229-PA | 1..268 | 1..267 | 1345 | 97.4 | Plus |
Dpse\GA22914-PA | 268 | GA22914-PA | 38..268 | 37..267 | 1181 | 97.4 | Plus |
Dpse\GA22913-PA | 292 | GA22913-PA | 38..261 | 37..260 | 1086 | 93.3 | Plus |
Dpse\GA22532-PA | 217 | GA22532-PA | 33..216 | 37..267 | 869 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12203-PA | 267 | GM12203-PA | 1..267 | 1..267 | 1366 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22330-PA | 267 | GD22330-PA | 1..267 | 1..267 | 1366 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21626-PA | 268 | GJ21626-PA | 1..268 | 1..267 | 1350 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18106-PA | 268 | GK18106-PA | 1..268 | 1..267 | 1340 | 97 | Plus |
Dwil\GK22287-PA | 186 | GK22287-PA | 6..186 | 70..251 | 865 | 92.3 | Plus |
Dwil\GK21166-PA | 213 | GK21166-PA | 39..205 | 38..226 | 769 | 82 | Plus |
Dwil\GK23130-PA | 136 | GK23130-PA | 55..136 | 167..248 | 403 | 96.3 | Plus |
Dwil\GK23130-PA | 136 | GK23130-PA | 2..55 | 42..95 | 264 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\sop-PA | 267 | GE10248-PA | 1..267 | 1..267 | 1363 | 98.1 | Plus |