BDGP Sequence Production Resources |
Search the DGRC for LD24242
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 242 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | BCAS2-RA |
Protein status: | LD24242.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 981 |
Gene | Date | Evidence |
---|---|---|
CG4980 | 2001-01-01 | Release 2 assignment |
CG4980 | 2002-05-31 | Blastp of sequenced clone |
CG4980 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4980 | 2008-04-29 | Release 5.5 accounting |
CG4980 | 2008-08-15 | Release 5.9 accounting |
CG4980 | 2008-12-18 | 5.12 accounting |
981 bp (981 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118331
> LD24242.complete AAACAGTCTCAAAACACAGAAATTAATAATAAATAATGGCTGGCGAAGTT ATTGTGGATGCTCTGCCCTACATAGATCACGGCTATGACGATGTGGGCGT CCGGGAATCGGCTCTCGCCATGGTGGAGGAGGAATGCCGGCGCTATAGGC CCACAAAAAATTACCTTGACCATCTGCCACTGCCCGCCAGCTCGCCCTTT GAGACTCCGCTGATGGCCAACGAGTTCGAGCGCATCCAGAACCGCCTGCC CATGGAGACGCTCTCCATGAAGCGCTACGAACTGCCACCGCCGCCATCGG GCAAATTGTCGGAGGTGTCCGCCTGGCAGGAGGCCATTGAGAACTCGATG GCCCAGCTGGAGCACCAGTGGGTGCGCTCTCTCAACCTGGAGCTAATGCT CGACTACGGCACGGAGGCATGGAAGTCCTACCTGGAGGTCTTCACCGCCA TGCAGGCGAAGGCGCAGCTCCAGCTGCAGCAGCTGAAGAAGGACATTCAA GATGTCAACTGGCAGCGCAAGCAGGCGCAAACGCAGGCCGGCGAGCGACT GCGCTCCCTGGAAGCCCATTGGGTGCTGCTGGTCTCCAAGAACTACGAGA TCGAGACGGAGTGCGTCGAGCTGGAAAAGATCGTCCATGCCGCCCGTCAG CAGCTGCGGAAGATTACCCCGCCGCCCAGCGCCAATGACACGGCTCCAAC GCCGGAATACACGAATGGTTTCGACCAGAACGATTTGGCCGAGAGCAACG GCAGTAGCTCCAGCAATCCAGATCCAAGCCAACCTGGCGATGATGGAACA GATGCCGATGGTGACAGCAAGGAGGAGGACAAATCCGAGGCACAGGAGGA ATCTTCCAATGGATCAACGTAGATTTAGTACACTGAGCGAAAGCATGAAG CAAGTTAAAGAAAAACTTACGACTGTAACTAAATATAAAGGATATTAAAA AAAACAGCTAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 23744244..23745092 | 111..959 | 99 | <- | Minus |
chr3R | 23745160..23745269 | 1..110 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4980-RA | 1..837 | 36..872 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4980-RA | 1..837 | 36..872 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BCAS2-RA | 1..837 | 36..872 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4980-RA | 1..837 | 36..872 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BCAS2-RA | 1..837 | 36..872 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4980-RA | 44..1002 | 1..959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4980-RA | 44..1002 | 1..959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BCAS2-RA | 49..1007 | 1..959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4980-RA | 44..1002 | 1..959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BCAS2-RA | 49..1007 | 1..959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27922199..27922308 | 1..110 | 100 | Minus | |
3R | 27921283..27922131 | 111..959 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27922199..27922308 | 1..110 | 100 | Minus | |
3R | 27921283..27922131 | 111..959 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27922199..27922308 | 1..110 | 100 | Minus | |
3R | 27921283..27922131 | 111..959 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 23747921..23748030 | 1..110 | 100 | Minus | |
arm_3R | 23747005..23747853 | 111..959 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27662114..27662962 | 111..959 | 100 | <- | Minus |
3R | 27663030..27663139 | 1..110 | 100 | Minus |
Translation from 35 to 871
> LD24242.pep MAGEVIVDALPYIDHGYDDVGVRESALAMVEEECRRYRPTKNYLDHLPLP ASSPFETPLMANEFERIQNRLPMETLSMKRYELPPPPSGKLSEVSAWQEA IENSMAQLEHQWVRSLNLELMLDYGTEAWKSYLEVFTAMQAKAQLQLQQL KKDIQDVNWQRKQAQTQAGERLRSLEAHWVLLVSKNYEIETECVELEKIV HAARQQLRKITPPPSANDTAPTPEYTNGFDQNDLAESNGSSSSNPDPSQP GDDGTDADGDSKEEDKSEAQEESSNGST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16139-PA | 273 | GF16139-PA | 1..272 | 1..277 | 1236 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12084-PA | 276 | GG12084-PA | 1..276 | 1..278 | 1240 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19168-PA | 290 | GH19168-PA | 1..241 | 1..243 | 1106 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
BCAS2-PA | 278 | CG4980-PA | 1..278 | 1..278 | 1452 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23273-PA | 275 | GI23273-PA | 1..213 | 1..213 | 1012 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23883-PA | 286 | GL23883-PA | 1..233 | 1..234 | 1043 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18571-PA | 284 | GA18571-PA | 1..233 | 1..234 | 1043 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16313-PA | 278 | GM16313-PA | 1..278 | 1..278 | 1292 | 96 | Plus |
Dsec\GM16249-PA | 278 | GM16249-PA | 1..278 | 1..278 | 1292 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18049-PA | 277 | GD18049-PA | 1..277 | 1..278 | 1243 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10773-PA | 256 | GJ10773-PA | 1..249 | 1..253 | 1036 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11659-PA | 294 | GK11659-PA | 1..294 | 1..277 | 1058 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10530-PA | 276 | GE10530-PA | 1..276 | 1..278 | 1321 | 94.6 | Plus |
Translation from 35 to 871
> LD24242.hyp MAGEVIVDALPYIDHGYDDVGVRESALAMVEEECRRYRPTKNYLDHLPLP ASSPFETPLMANEFERIQNRLPMETLSMKRYELPPPPSGKLSEVSAWQEA IENSMAQLEHQWVRSLNLELMLDYGTEAWKSYLEVFTAMQAKAQLQLQQL KKDIQDVNWQRKQAQTQAGERLRSLEAHWVLLVSKNYEIETECVELEKIV HAARQQLRKITPPPSANDTAPTPEYTNGFDQNDLAESNGSSSSNPDPSQP GDDGTDADGDSKEEDKSEAQEESSNGST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
BCAS2-PA | 278 | CG4980-PA | 1..278 | 1..278 | 1452 | 100 | Plus |