BDGP Sequence Production Resources |
Search the DGRC for LD24245
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 242 |
Well: | 45 |
Vector: | pOT2 |
Associated Gene/Transcript | Dp-RA |
Protein status: | LD24245.pep: gold |
Preliminary Size: | 2562 |
Sequenced Size: | 2495 |
Gene | Date | Evidence |
---|---|---|
CG4654 | 2001-01-01 | Release 2 assignment |
CG4654 | 2001-11-29 | Blastp of sequenced clone |
CG4654 | 2003-01-01 | Sim4 clustering to Release 3 |
Dp | 2008-04-29 | Release 5.5 accounting |
Dp | 2008-08-15 | Release 5.9 accounting |
Dp | 2008-12-18 | 5.12 accounting |
2495 bp (2495 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069526
> LD24245.complete CTGCTTTGCCTTTCCCACATGAAAACGAAAAGCAGCCACTTGGTGGAAAT TTTGTGACCATTTTGTTGCGCTTAGAAATTGCGGAAATTCGCGCTGCTGC CAGCCGTTCGATAGCTAAAAGTTCGCCGTATCTTTTGCCACTAATCTCGT GAAAATCCGTGCGCCGAAACACCGCGAAAAAGGCCACCGAAAAAGGGCCG CCGCTGTGAGTGTGTGTGAGCAGCAGAAAAGAAAAAAAAAATGCCCTGCC GCTGGAAGTGAAAAATGCGCTCGCCATTTTGACTTGGGCGACACTTATTT TTTGTACAAGTGCGCTCCCCATTGCAGTCGTCGTCGTCGTGGTCGTGGTC CGCATCCGGATTTGCACACGTGCCCCAGTCCGTGGGTGCAGTACGTCCGC CTATCCACCGCCGTCGCCCATTCCAGCTCCATTTGCCCCCCCCTAGCACA CACGTTGCGGCGAAACGGCACGTAGCACTGCTCTTTCCTTTTGTTTTTGG CGGTCCACCTGGTGAGCGGTAAGCGACAACAACAAGATCACTTGATCTCC GGCGGCCGAAAAATGGCGCATTCGACGGGCGGTACGGTGAAGACCGATGA GGTGAACTTCTTCTTCCGGAACGAGCACGGACAAATATCCAAAATGCTGA AGCCGGCCCAGAACAAGTCCGAAATGGAGGGAGGTAAGCCCGTGGCGGTG GTCTACGCCACCGGCTCATCCGCGCGCAACAGCGGAAGTGCTAGCGGCAT CGGCAACGTGGGACGCATGGGCGCCTTTAGTCAGATGGGCAGTCAAGGGC AGTTTATACGACTGCAGGACAACGGACTGTCCATTCCAAAAACAGAAGCA GGTACCACCTACACCACCGTTTCGGCGCAAAAGACTTCGGGTGCTGGCAG TGGTCATTACGACTTGCCCTTGAAGGGAGATCGCTATGTGAAGTTTACAC CAAATCCCATAAAAATGAAATCAAAACTCCATGCCATTCAGAGCAACTCG TTGCACTCCATGTCGGCCTCCTCATCGTCCGTTCAAAGGAAACGCAAGCC GGACAAGGCAGGCAAAGGTTTGCGCCATTTCTCGATGAAGGTATGCGAAA AGGTGGAGGAGAAGGGCAAGACCACCTACAATGAGGTGGCCGACGACCTG GTCAGCGAGGAGATGAAGAACAATGCGTACGACAACAACTGTGATCAAAA GAATATCCGACGTCGTGTCTACGATGCGCTCAACGTACTGATGGCAATCA ATGTTATTTCCAAGGACAAGAAGGAGATTCGCTGGATAGGACTGCCCGCA AATTCGACAGAGACATTTCTGGCCCTGGAAGAGGAAAACTGTCAGCGCCG CGAGCGAATAAAACAGAAAAACGAAATGTTGCGCGAAATGATCATGCAGC ATGTGGCGTTCAAGGGATTGGTCGAGCGGAACAAGCGAAACGAGAGCCAA GGCGTGGTGCCTTCCCCGAATGCCTCGATCCAGCTACCGTTCATCATCGT GAACACGCACAAGTCCACGAAAATCAACTGCAGTGTGACCAACGACAAGT CCGAATACATATTCAAGTTCGACAAAACCTTCGAAATGCACGATGACATT GAGGTGCTCAAGCGTATGGGATTCCTATTGGGACTGGATAAGGGCGAATG CACGCCGGAGAACATTGAACGAGTCAAGTCGTGGGTGCCTCCAAACCTTG CCAAATACGTAGAAGCCTACGGCACCGGCAAGACTGGCGAAAATATGTAC GAATCGGATGACGAGGACAATGAGTTCAACGGGTACCTGGAGTCGGCCAA TGAGTCCCAGGGCTTTGCACAACACTCGGCACAACACACCACCGATGGCG AGTTCAAGCTGGAGATGGATGATGACGAGCTGGACGACGACATTGATTGA GCTGATGGTGCCGCCGTCATTGTGCCAGCCATGGCCGATGCGGACACGGA TGCGGATGGAGGAGCAGATGCTGATGCGGAGGACACGTTTAGTTTTACGT TTATCAACGCTTTGTTAGGTTTGCCACGGCCCCCTGGTTAGTCAGGAGCC GCACTCCACTCCAATCCACTCCACACCCAATCCGACCCACCCACACAATT GGTTTTGTTTACTTCTCAATGAGACTCTTAAATTATATATATACAATCTC GCAGCGACGAGAAAGATTCGGTAGTTCATGTATGTAAGTGTAGTTTGCAT ACACAGTTTGTAATTGTATCATTGAAGATTTATGTTTAAGCTGAAACGTT TTTAAAATAATTTGTCTAGTTAAGGAGAACGCGTTTTTAGTTCAAACCAC AATTCACATAAGGCAATACCGCGAAACCACATGCCCAGACTAATGTTCAC TCTCTAATTAGTTGTTATCAGTCTCCCTTTTCCCCCCAATGGCCTTTTCA TGTTTGGGTAGGCTTAAGCAAAAGCGATAATGTTATGGGTAATTGTCTCT TAATAATATAATATACCAAAACTGTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dp-RA | 2758 | Dp-RA | 88..2563 | 1..2476 | 12380 | 100 | Plus |
Dp.f | 3007 | Dp.f | 88..2563 | 1..2476 | 12380 | 100 | Plus |
Dp.e | 3066 | Dp.e | 41..1755 | 1..1715 | 8575 | 100 | Plus |
Dp.e | 3066 | Dp.e | 1810..2572 | 1714..2476 | 3815 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9114340..9115101 | 1714..2475 | 3810 | 100 | Plus |
chr2R | 21145070 | chr2R | 9109828..9110457 | 1..630 | 3150 | 100 | Plus |
chr2R | 21145070 | chr2R | 9113358..9113691 | 979..1312 | 1670 | 100 | Plus |
chr2R | 21145070 | chr2R | 9113758..9113997 | 1311..1550 | 1200 | 100 | Plus |
chr2R | 21145070 | chr2R | 9112822..9112981 | 629..788 | 800 | 100 | Plus |
chr2R | 21145070 | chr2R | 9113163..9113294 | 847..978 | 660 | 100 | Plus |
chr2R | 21145070 | chr2R | 9114201..9114285 | 1631..1715 | 425 | 100 | Plus |
chr2R | 21145070 | chr2R | 9114056..9114139 | 1549..1632 | 420 | 100 | Plus |
chr2R | 21145070 | chr2R | 9113046..9113107 | 787..848 | 310 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13226984..13227746 | 1714..2476 | 3815 | 100 | Plus |
2R | 25286936 | 2R | 13222484..13223113 | 1..630 | 3150 | 100 | Plus |
2R | 25286936 | 2R | 13226002..13226335 | 979..1312 | 1670 | 100 | Plus |
2R | 25286936 | 2R | 13226402..13226641 | 1311..1550 | 1200 | 100 | Plus |
2R | 25286936 | 2R | 13225466..13225625 | 629..788 | 800 | 100 | Plus |
2R | 25286936 | 2R | 13225807..13225938 | 847..978 | 660 | 100 | Plus |
2R | 25286936 | 2R | 13226845..13226929 | 1631..1715 | 425 | 100 | Plus |
2R | 25286936 | 2R | 13226700..13226783 | 1549..1632 | 420 | 100 | Plus |
2R | 25286936 | 2R | 13225690..13225751 | 787..848 | 310 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13228183..13228945 | 1714..2476 | 3815 | 100 | Plus |
2R | 25260384 | 2R | 13223683..13224312 | 1..630 | 3150 | 100 | Plus |
2R | 25260384 | 2R | 13227201..13227534 | 979..1312 | 1670 | 100 | Plus |
2R | 25260384 | 2R | 13227601..13227840 | 1311..1550 | 1200 | 100 | Plus |
2R | 25260384 | 2R | 13226665..13226824 | 629..788 | 800 | 100 | Plus |
2R | 25260384 | 2R | 13227006..13227137 | 847..978 | 660 | 100 | Plus |
2R | 25260384 | 2R | 13228044..13228128 | 1631..1715 | 425 | 100 | Plus |
2R | 25260384 | 2R | 13227899..13227982 | 1549..1632 | 420 | 100 | Plus |
2R | 25260384 | 2R | 13226889..13226950 | 787..848 | 310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9109828..9110456 | 1..629 | 100 | -> | Plus |
chr2R | 9112823..9112980 | 630..787 | 100 | -> | Plus |
chr2R | 9113047..9113107 | 788..848 | 100 | -> | Plus |
chr2R | 9113165..9113294 | 849..978 | 100 | -> | Plus |
chr2R | 9113358..9113691 | 979..1312 | 100 | -> | Plus |
chr2R | 9113760..9113995 | 1313..1548 | 100 | -> | Plus |
chr2R | 9114056..9114138 | 1549..1631 | 100 | -> | Plus |
chr2R | 9114202..9114285 | 1632..1715 | 100 | -> | Plus |
chr2R | 9114342..9115101 | 1716..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dp-RA | 1..1338 | 563..1900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dp-RA | 1..1338 | 563..1900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dp-RA | 1..1338 | 563..1900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dp-RA | 1..1338 | 563..1900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dp-RA | 1..1338 | 563..1900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dp-RA | 88..2562 | 1..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dp-RA | 88..2562 | 1..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dp-RA | 52..2526 | 1..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dp-RA | 88..2562 | 1..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dp-RA | 52..2526 | 1..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13222484..13223112 | 1..629 | 100 | -> | Plus |
2R | 13225467..13225624 | 630..787 | 100 | -> | Plus |
2R | 13225691..13225751 | 788..848 | 100 | -> | Plus |
2R | 13225809..13225938 | 849..978 | 100 | -> | Plus |
2R | 13226002..13226335 | 979..1312 | 100 | -> | Plus |
2R | 13226404..13226639 | 1313..1548 | 100 | -> | Plus |
2R | 13226700..13226782 | 1549..1631 | 100 | -> | Plus |
2R | 13226846..13226929 | 1632..1715 | 100 | -> | Plus |
2R | 13226986..13227745 | 1716..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13222484..13223112 | 1..629 | 100 | -> | Plus |
2R | 13225467..13225624 | 630..787 | 100 | -> | Plus |
2R | 13225691..13225751 | 788..848 | 100 | -> | Plus |
2R | 13225809..13225938 | 849..978 | 100 | -> | Plus |
2R | 13226002..13226335 | 979..1312 | 100 | -> | Plus |
2R | 13226404..13226639 | 1313..1548 | 100 | -> | Plus |
2R | 13226700..13226782 | 1549..1631 | 100 | -> | Plus |
2R | 13226846..13226929 | 1632..1715 | 100 | -> | Plus |
2R | 13226986..13227745 | 1716..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13222484..13223112 | 1..629 | 100 | -> | Plus |
2R | 13225467..13225624 | 630..787 | 100 | -> | Plus |
2R | 13225691..13225751 | 788..848 | 100 | -> | Plus |
2R | 13225809..13225938 | 849..978 | 100 | -> | Plus |
2R | 13226002..13226335 | 979..1312 | 100 | -> | Plus |
2R | 13226404..13226639 | 1313..1548 | 100 | -> | Plus |
2R | 13226700..13226782 | 1549..1631 | 100 | -> | Plus |
2R | 13226846..13226929 | 1632..1715 | 100 | -> | Plus |
2R | 13226986..13227745 | 1716..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9109989..9110617 | 1..629 | 100 | -> | Plus |
arm_2R | 9112972..9113129 | 630..787 | 100 | -> | Plus |
arm_2R | 9113196..9113256 | 788..848 | 100 | -> | Plus |
arm_2R | 9113314..9113443 | 849..978 | 100 | -> | Plus |
arm_2R | 9113507..9113840 | 979..1312 | 100 | -> | Plus |
arm_2R | 9113909..9114144 | 1313..1548 | 100 | -> | Plus |
arm_2R | 9114205..9114287 | 1549..1631 | 100 | -> | Plus |
arm_2R | 9114351..9114434 | 1632..1715 | 100 | -> | Plus |
arm_2R | 9114491..9115250 | 1716..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13228045..13228128 | 1632..1715 | 100 | -> | Plus |
2R | 13227603..13227838 | 1313..1548 | 100 | -> | Plus |
2R | 13227899..13227981 | 1549..1631 | 100 | -> | Plus |
2R | 13227201..13227534 | 979..1312 | 100 | -> | Plus |
2R | 13223683..13224311 | 1..629 | 100 | -> | Plus |
2R | 13226666..13226823 | 630..787 | 100 | -> | Plus |
2R | 13226890..13226950 | 788..848 | 100 | -> | Plus |
2R | 13227008..13227137 | 849..978 | 100 | -> | Plus |
2R | 13228185..13228944 | 1716..2475 | 100 | Plus |
Translation from 562 to 1899
> LD24245.hyp MAHSTGGTVKTDEVNFFFRNEHGQISKMLKPAQNKSEMEGGKPVAVVYAT GSSARNSGSASGIGNVGRMGAFSQMGSQGQFIRLQDNGLSIPKTEAGTTY TTVSAQKTSGAGSGHYDLPLKGDRYVKFTPNPIKMKSKLHAIQSNSLHSM SASSSSVQRKRKPDKAGKGLRHFSMKVCEKVEEKGKTTYNEVADDLVSEE MKNNAYDNNCDQKNIRRRVYDALNVLMAINVISKDKKEIRWIGLPANSTE TFLALEEENCQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNESQGVVP SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLK RMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKTGENMYESDD EDNEFNGYLESANESQGFAQHSAQHTTDGEFKLEMDDDELDDDID*
Translation from 562 to 1899
> LD24245.pep MAHSTGGTVKTDEVNFFFRNEHGQISKMLKPAQNKSEMEGGKPVAVVYAT GSSARNSGSASGIGNVGRMGAFSQMGSQGQFIRLQDNGLSIPKTEAGTTY TTVSAQKTSGAGSGHYDLPLKGDRYVKFTPNPIKMKSKLHAIQSNSLHSM SASSSSVQRKRKPDKAGKGLRHFSMKVCEKVEEKGKTTYNEVADDLVSEE MKNNAYDNNCDQKNIRRRVYDALNVLMAINVISKDKKEIRWIGLPANSTE TFLALEEENCQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNESQGVVP SPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLK RMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKTGENMYESDD EDNEFNGYLESANESQGFAQHSAQHTTDGEFKLEMDDDELDDDID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11948-PA | 444 | GF11948-PA | 1..431 | 1..432 | 1850 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20367-PA | 446 | GG20367-PA | 1..446 | 1..445 | 2304 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20730-PA | 450 | GH20730-PA | 1..437 | 1..432 | 1700 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dp-PA | 445 | CG4654-PA | 1..445 | 1..445 | 2315 | 100 | Plus |
Dp-PB | 441 | CG4654-PB | 16..441 | 20..445 | 2199 | 99.5 | Plus |
Dp-PC | 417 | CG4654-PC | 1..417 | 28..445 | 2155 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20813-PA | 447 | GI20813-PA | 1..434 | 1..432 | 1618 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11558-PA | 181 | GL11558-PA | 16..152 | 10..143 | 451 | 69.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18332-PA | 446 | GA18332-PA | 16..427 | 10..426 | 1739 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21454-PA | 447 | GM21454-PA | 1..447 | 1..445 | 2348 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10952-PA | 383 | GD10952-PA | 1..378 | 1..377 | 1954 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20546-PA | 447 | GJ20546-PA | 1..434 | 1..432 | 1618 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22007-PA | 456 | GK22007-PA | 1..442 | 1..432 | 1715 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12526-PA | 446 | GE12526-PA | 1..436 | 1..435 | 2195 | 95.2 | Plus |