BDGP Sequence Production Resources |
Search the DGRC for LD24308
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 243 |
Well: | 8 |
Vector: | pOT2 |
Associated Gene/Transcript | l(1)G0193-RA |
Protein status: | LD24308.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2573 |
Gene | Date | Evidence |
---|---|---|
CG2206 | 2001-01-01 | Release 2 assignment |
CG2206 | 2001-09-19 | Blastp of sequenced clone |
CG2206 | 2003-01-01 | Sim4 clustering to Release 3 |
l(1)G0193 | 2008-04-29 | Release 5.5 accounting |
l(1)G0193 | 2008-08-15 | Release 5.9 accounting |
l(1)G0193 | 2008-12-18 | 5.12 accounting |
2573 bp (2573 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058541
> LD24308.complete AGCGGCGAGAGCAGCACAGCAGATTAATCTGCCAACGTCGTCGAAACTCG ACGCTCGAGCTCGAGACAAAACTCGACTCTCTGTTTTTGTGACTATCCTC CCATTTGCGTTTTGATTTTCAGCGGGCGCAGTTGCGTGCCAGCCCGTGTC TATCTGTCTGTCTGTGTGTTTGCTTGTTTGTGCAAGCATTTAATCATAAT ATTTAAAAGACACCCCACCATCGTCAGCACAACATCCCCAACGATCGTCA AATTTCGCGCTGCAATAAATAAATAAACATTCATATACAAAACGAAACCC AAATAGCACTCACGCACAGCCGGCTGCAGGATGAGATTTATAAATTGGGT ACTTCCCCTGCTTCTGGCCACGTTGGTCGCCCTGCAACAGCCCACACTAA CGGACGCTCTGATCGAGGATGTCCTGGACATCATACATGTGGTCAAAGAG GTCACCTCCGGCGTCCTCAAGGCCTGGGACATTGTACAATCCTCCCCGTT GGCGGCCAACATTGATTTCCCACTGATGCGCGAGAAACAGAAGAAGGTGT TGCAGCGCCTCAAAGAAGTCAGCAAGCAAATAGACAATACCGAAGATCAG CACGCTCAATATGTTGCCTTGGCCATCGAATCGGTGACTAGCTTCATGCA CAACAACGCTCCAATTATGGCTAAGATGAATGATATCTCGGACACGATCA ATAGGATCTCATCGCGCTATCAGCAGATGCAGAAGTACGAGGCTTACAAG GACAAGTTGGAGATGTCCACGCTGATAACGTTTGCGGAGTGGACAGTGTC GCCGAATGCACATTCGGTGCACCATCTGATGGATCGTCTGCATATCACTC TACTTGGCAACGAGGATCGATCTTCCAACACAACGTCCACCAATCTACTC CAACAGCTGGCCACTGCCTATGAGGTGTCTACCGATCAAATTTGCAATAC CATGCAATCGGCCCAGCAGTTTATATACTCACTATATGCGGATATAGCCC TGACCGAACTGAAAGCCTACACCATGATGGAATTCTCGTGGATGATGTTG CGGGTCTACGGGAAGGGCAACTACACCCAGGAGGCGGAAATCATGCGTTC CGAATATGAGAAGAGGACGGAACGCACACTAAAAATACTCAAGGATGTGA TGCTACGAGCTGATCGTATCGTTTACCGCTGTGATCCGACGAAACATGTA CGGGGAGTCACCTATGACGAGGTCACGCGCCTCCTTCAAGGCTACATTGA AAACGAGGTGGATTTGAATAAAGAGGAAACTTGCCGAGAGACGTGTGACT TTTATCAGTCCACCCGCAGTGAAGGCTGCTTTAAGGATCTCTACTGTTCC CGTCAGCCGAAATGTAGTGGTCGTCTGTACAACTGCAGGTTCGTAGACTC CGACATGTGGGTGTGCCCGTCGCCACAGAATAGCACGCGGCGCTATGAGT TCATCGAGTACGAAAACGGACGCGTCCTTGGCCAGCGGGGTAAGTGCACC AGGGGCACCACCAAGGTGGACAGCTGGTGGCGTTACCTTCTCTGGCACTG CAGCTACTGCTTCTGCCTGTGCGACGAGGAGGGTCTGAAGTCTGATCGTT TCTTCAATCTGCGGGACACGATCGCCGATGTCAAGCGCAACCGAGTCGTG ACTGGTTTGCGTTTTGTAAAGCAAAATCGCATTTTCCATCTGCAAATCCA GGAGGGCGAACTCCTGCCTCGTGGTATTGTCAATCAAAGCACTCTGGAAT GGAAACCCGTGGAAAAGTACAACGTCTTTGATCGTCATGTGAAGAATGGC GTTGATTATCATAAGTTGAGCTACGAGAAACGCACCATCGATCTGGACGA TGTGGATACGGATGACAATTCCTTTGTCGTTACCGGCGTGCGATTCCGTG TGGTGGGCACACATCTGAATTTGGAGGCCTACTACAGTGAGTTTGATTTC CGGACGGGTCAGCTCATCCGGCCGGAGTACAATAGCTATTGGAAGTCCAA CGACAATACCGATGTCAGCGGCGCACGCAGGGAGAAACTGCGTCTGAGCA ACGCCGACGTGTCTACGCGGACAATAGCACACTCGATACCTCTGTCGCGC CACAATCAGTACATCGACTTCACTAACACTGGACTGGACAAGGATGCCGC CCAGAGCACAGTGCCGTTTATGGACATCCAGGACGTGGTCTCGAATCCAC CAGTACCACTAGCCGGCATTGGCATTTACTACAAGGGCCGCAACGGCTAC GGCGGCTTCCTGGGCCCCAAGATCATCACCTACGACTTCATGCCCCACGT TCAGGTGCCAAAGAATAGATTCTAAAGCGGAGAGAAGCGGTGCTGTTTCC ATCCCGCACATATGTCATAGCTTTTTTTTAGTTGTACACTACCTATCAAT ACACACTTGCGTTTAACTGTCGCATAGTCTAAGTGAGATCAGAGGAGAAC GAACCGCAGGAGATGCAGAATCCGGCAAGACAAGAATATAAAAACAAATT ATATTGAAAATAACAAAAGAAATAAAAACGAATGTGAATCTGAGAAACCA GAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0193-RA | 2729 | l(1)G0193-RA | 125..2676 | 1..2552 | 12760 | 100 | Plus |
l(1)G0193.a | 2505 | l(1)G0193.a | 877..2505 | 924..2552 | 8145 | 100 | Plus |
l(1)G0193-RB | 2674 | l(1)G0193-RB | 994..2621 | 925..2552 | 8140 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7834406..7835126 | 1643..923 | 3605 | 100 | Minus |
chrX | 22417052 | chrX | 7838303..7838902 | 600..1 | 3000 | 100 | Minus |
chrX | 22417052 | chrX | 7833375..7833898 | 2551..2028 | 2620 | 100 | Minus |
chrX | 22417052 | chrX | 7833954..7834342 | 2031..1643 | 1945 | 100 | Minus |
chrX | 22417052 | chrX | 7837790..7838119 | 926..597 | 1650 | 100 | Minus |
chr2L | 23010047 | chr2L | 1824285..1824473 | 2290..2102 | 255 | 75.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7942509..7943229 | 1643..923 | 3605 | 100 | Minus |
X | 23542271 | X | 7946407..7947006 | 600..1 | 3000 | 100 | Minus |
X | 23542271 | X | 7941477..7942001 | 2552..2028 | 2625 | 100 | Minus |
X | 23542271 | X | 7942057..7942445 | 2031..1643 | 1945 | 100 | Minus |
X | 23542271 | X | 7945894..7946223 | 926..597 | 1650 | 100 | Minus |
2L | 23513712 | 2L | 1824436..1824624 | 2290..2102 | 255 | 75.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7950607..7951327 | 1643..923 | 3605 | 100 | Minus |
X | 23527363 | X | 7954505..7955104 | 600..1 | 3000 | 100 | Minus |
X | 23527363 | X | 7949575..7950099 | 2552..2028 | 2625 | 100 | Minus |
X | 23527363 | X | 7950155..7950543 | 2031..1643 | 1945 | 100 | Minus |
X | 23527363 | X | 7953992..7954321 | 926..597 | 1650 | 100 | Minus |
2L | 23513712 | 2L | 1824436..1824624 | 2290..2102 | 255 | 75.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dtei\I-element | 5386 | Dtei\I-element DTEII 5386bp | 72..135 | 206..146 | 115 | 67.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7833375..7833895 | 2031..2551 | 100 | <- | Minus |
chrX | 7833955..7834341 | 1644..2030 | 100 | <- | Minus |
chrX | 7834406..7835124 | 925..1643 | 100 | <- | Minus |
chrX | 7837792..7838115 | 601..924 | 100 | <- | Minus |
chrX | 7838303..7838902 | 1..600 | 94 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0193-RA | 1..1995 | 331..2325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0193-RA | 1..1995 | 331..2325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0193-RA | 1..1995 | 331..2325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0193-RA | 1..1995 | 331..2325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0193-RA | 1..1995 | 331..2325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0193-RA | 1..2551 | 1..2551 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0193-RA | 1..2551 | 1..2551 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0193-RA | 1..2453 | 99..2551 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0193-RA | 1..2551 | 1..2551 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0193-RA | 1..2453 | 99..2551 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7941478..7941998 | 2031..2551 | 100 | <- | Minus |
X | 7942058..7942444 | 1644..2030 | 100 | <- | Minus |
X | 7942509..7943227 | 925..1643 | 100 | <- | Minus |
X | 7945896..7946219 | 601..924 | 100 | <- | Minus |
X | 7946407..7947006 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7941478..7941998 | 2031..2551 | 100 | <- | Minus |
X | 7942058..7942444 | 1644..2030 | 100 | <- | Minus |
X | 7942509..7943227 | 925..1643 | 100 | <- | Minus |
X | 7945896..7946219 | 601..924 | 100 | <- | Minus |
X | 7946407..7947006 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7941478..7941998 | 2031..2551 | 100 | <- | Minus |
X | 7942058..7942444 | 1644..2030 | 100 | <- | Minus |
X | 7942509..7943227 | 925..1643 | 100 | <- | Minus |
X | 7945896..7946219 | 601..924 | 100 | <- | Minus |
X | 7946407..7947006 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7835511..7836031 | 2031..2551 | 100 | <- | Minus |
arm_X | 7836091..7836477 | 1644..2030 | 100 | <- | Minus |
arm_X | 7836542..7837260 | 925..1643 | 100 | <- | Minus |
arm_X | 7839929..7840252 | 601..924 | 100 | <- | Minus |
arm_X | 7840440..7841039 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7949576..7950096 | 2031..2551 | 100 | <- | Minus |
X | 7950156..7950542 | 1644..2030 | 100 | <- | Minus |
X | 7950607..7951325 | 925..1643 | 100 | <- | Minus |
X | 7953994..7954317 | 601..924 | 100 | <- | Minus |
X | 7954505..7955104 | 1..600 | 100 | Minus |
Translation from 330 to 2324
> LD24308.hyp MRFINWVLPLLLATLVALQQPTLTDALIEDVLDIIHVVKEVTSGVLKAWD IVQSSPLAANIDFPLMREKQKKVLQRLKEVSKQIDNTEDQHAQYVALAIE SVTSFMHNNAPIMAKMNDISDTINRISSRYQQMQKYEAYKDKLEMSTLIT FAEWTVSPNAHSVHHLMDRLHITLLGNEDRSSNTTSTNLLQQLATAYEVS TDQICNTMQSAQQFIYSLYADIALTELKAYTMMEFSWMMLRVYGKGNYTQ EAEIMRSEYEKRTERTLKILKDVMLRADRIVYRCDPTKHVRGVTYDEVTR LLQGYIENEVDLNKEETCRETCDFYQSTRSEGCFKDLYCSRQPKCSGRLY NCRFVDSDMWVCPSPQNSTRRYEFIEYENGRVLGQRGKCTRGTTKVDSWW RYLLWHCSYCFCLCDEEGLKSDRFFNLRDTIADVKRNRVVTGLRFVKQNR IFHLQIQEGELLPRGIVNQSTLEWKPVEKYNVFDRHVKNGVDYHKLSYEK RTIDLDDVDTDDNSFVVTGVRFRVVGTHLNLEAYYSEFDFRTGQLIRPEY NSYWKSNDNTDVSGARREKLRLSNADVSTRTIAHSIPLSRHNQYIDFTNT GLDKDAAQSTVPFMDIQDVVSNPPVPLAGIGIYYKGRNGYGGFLGPKIIT YDFMPHVQVPKNRF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0193-PA | 664 | CG2206-PA | 1..664 | 1..664 | 3511 | 100 | Plus |
l(1)G0193-PB | 646 | CG2206-PB | 98..646 | 129..664 | 2524 | 88.4 | Plus |
CG31664-PC | 529 | CG31664-PC | 4..526 | 122..660 | 1402 | 50.5 | Plus |
CG31664-PB | 528 | CG31664-PB | 4..525 | 122..660 | 1396 | 50.1 | Plus |
CG30409-PB | 98 | CG30409-PB | 29..96 | 293..358 | 156 | 39.7 | Plus |
Translation from 330 to 2324
> LD24308.pep MRFINWVLPLLLATLVALQQPTLTDALIEDVLDIIHVVKEVTSGVLKAWD IVQSSPLAANIDFPLMREKQKKVLQRLKEVSKQIDNTEDQHAQYVALAIE SVTSFMHNNAPIMAKMNDISDTINRISSRYQQMQKYEAYKDKLEMSTLIT FAEWTVSPNAHSVHHLMDRLHITLLGNEDRSSNTTSTNLLQQLATAYEVS TDQICNTMQSAQQFIYSLYADIALTELKAYTMMEFSWMMLRVYGKGNYTQ EAEIMRSEYEKRTERTLKILKDVMLRADRIVYRCDPTKHVRGVTYDEVTR LLQGYIENEVDLNKEETCRETCDFYQSTRSEGCFKDLYCSRQPKCSGRLY NCRFVDSDMWVCPSPQNSTRRYEFIEYENGRVLGQRGKCTRGTTKVDSWW RYLLWHCSYCFCLCDEEGLKSDRFFNLRDTIADVKRNRVVTGLRFVKQNR IFHLQIQEGELLPRGIVNQSTLEWKPVEKYNVFDRHVKNGVDYHKLSYEK RTIDLDDVDTDDNSFVVTGVRFRVVGTHLNLEAYYSEFDFRTGQLIRPEY NSYWKSNDNTDVSGARREKLRLSNADVSTRTIAHSIPLSRHNQYIDFTNT GLDKDAAQSTVPFMDIQDVVSNPPVPLAGIGIYYKGRNGYGGFLGPKIIT YDFMPHVQVPKNRF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20993-PA | 851 | GF20993-PA | 382..850 | 196..663 | 2294 | 85.7 | Plus |
Dana\GF11569-PA | 662 | GF11569-PA | 1..661 | 1..661 | 1575 | 43.1 | Plus |
Dana\GF20993-PA | 851 | GF20993-PA | 7..207 | 8..205 | 813 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17594-PA | 844 | GG17594-PA | 296..844 | 129..664 | 2457 | 82.9 | Plus |
Dere\GG24571-PA | 488 | GG24571-PA | 1..477 | 167..660 | 1436 | 54.3 | Plus |
Dere\GG17594-PA | 844 | GG17594-PA | 1..200 | 1..200 | 983 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24541-PA | 827 | GH24541-PA | 362..825 | 200..662 | 2043 | 75 | Plus |
Dgri\GH24541-PA | 827 | GH24541-PA | 22..178 | 20..176 | 672 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0193-PA | 664 | CG2206-PA | 1..664 | 1..664 | 3511 | 100 | Plus |
l(1)G0193-PB | 646 | CG2206-PB | 98..646 | 129..664 | 2524 | 88.4 | Plus |
CG31664-PE | 606 | CG31664-PE | 20..603 | 56..660 | 1422 | 47.4 | Plus |
CG31664-PD | 605 | CG31664-PD | 20..602 | 56..660 | 1416 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21656-PA | 727 | GI21656-PA | 26..725 | 20..662 | 2720 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15246-PA | 806 | GL15246-PA | 335..806 | 196..664 | 2279 | 84.1 | Plus |
Dper\GL10792-PA | 670 | GL10792-PA | 3..658 | 8..658 | 1573 | 45.8 | Plus |
Dper\GL15246-PA | 806 | GL15246-PA | 1..202 | 4..204 | 813 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15301-PA | 806 | GA15301-PA | 335..806 | 196..664 | 2278 | 84.1 | Plus |
Dpse\GA15824-PA | 670 | GA15824-PA | 3..658 | 8..658 | 1563 | 45.6 | Plus |
Dpse\GA15301-PA | 806 | GA15301-PA | 1..202 | 4..204 | 813 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11959-PA | 799 | GM11959-PA | 266..799 | 129..664 | 2288 | 79.3 | Plus |
Dsec\GM15999-PA | 549 | GM15999-PA | 25..545 | 28..567 | 1154 | 41.1 | Plus |
Dsec\GM11959-PA | 799 | GM11959-PA | 1..198 | 1..198 | 985 | 96 | Plus |
Dsec\GM16585-PA | 248 | GM16585-PA | 1..241 | 167..417 | 623 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24578-PA | 646 | GD24578-PA | 98..646 | 129..664 | 2485 | 84.8 | Plus |
Dsim\GD22891-PA | 490 | GD22891-PA | 1..479 | 167..660 | 1417 | 52.6 | Plus |
Dsim\GD22890-PA | 490 | GD22890-PA | 1..479 | 167..660 | 1405 | 52.2 | Plus |
Dsim\GD11752-PA | 163 | GD11752-PA | 2..155 | 499..653 | 432 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16894-PA | 824 | GJ16894-PA | 355..822 | 196..662 | 2139 | 78.8 | Plus |
Dvir\GJ21381-PA | 647 | GJ21381-PA | 11..646 | 27..661 | 1633 | 45.4 | Plus |
Dvir\GJ16894-PA | 824 | GJ16894-PA | 28..207 | 20..198 | 750 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16218-PA | 711 | GK16218-PA | 2..711 | 10..664 | 2807 | 73.2 | Plus |
Dwil\GK19560-PA | 672 | GK19560-PA | 3..662 | 8..652 | 1641 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17494-PA | 844 | GE17494-PA | 319..844 | 136..664 | 2488 | 84.7 | Plus |
Dyak\GE14278-PA | 678 | GE14278-PA | 4..657 | 10..661 | 1549 | 44.1 | Plus |
Dyak\GE15356-PA | 489 | GE15356-PA | 1..478 | 167..660 | 1437 | 54.3 | Plus |
Dyak\GE17494-PA | 844 | GE17494-PA | 1..201 | 1..201 | 1005 | 95.5 | Plus |