BDGP Sequence Production Resources |
Search the DGRC for LD24380
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 243 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | capt-RA |
Protein status: | LD24380.pep: gold |
Preliminary Size: | 1920 |
Sequenced Size: | 1962 |
Gene | Date | Evidence |
---|---|---|
CG5061 | 2001-01-01 | Release 2 assignment |
CG5074 | 2001-01-01 | Release 2 assignment |
CG5061 | 2002-12-11 | Blastp of sequenced clone |
CG5061 | 2003-01-01 | Sim4 clustering to Release 3 |
capt | 2008-04-29 | Release 5.5 accounting |
capt | 2008-08-15 | Release 5.9 accounting |
capt | 2008-12-18 | 5.12 accounting |
1962 bp (1962 high quality bases) assembled on 2002-12-11
GenBank Submission: AF132566
> LD24380.complete CGCCGGTGTTCGCTACGCAGCTTCTCGTCAGTTCTAATTGGAATACAACT GCAGATCCTTGCAAATTCATCAGCAGCAAAAGAAGATAACGAGCCGGAAG CCAAGCCCTCGGCCGCCGTCGACCACTTGGAGAGCATTTGCGAGCGACTG GAGACCCTCGTCGACCGATTGGAACGGACTCTAACAGCGCCACAGCCGAT AGAACTGCCCACGCCCACACTCCCGCCTCCGCCAGCCGAAGAAGAAGAAG CTCTTCCAGTTTTTGAAAAAGCAGAGACACCACCTCCACCTCCCTCGCCG CCCAGCAGCAACATGAGTGTCGCCGGATTCGAGGACATTGTGGCGGGTCC GCTGAGCCAATACCTAACTCTCTCCGCCAAAATTGGCGGCGATGTGGCGC AGCATGCGGAGCTCGTGAAGAGCGCCTTTGGCTCCCAACTGCAGTACGTG ACGCTGGCCACCCAGATCGCCCAGCCGGCGCAGCCCAAGCAGGCGGAGCT TCTGAAGCCGACCTCGACGCAGATCAGCGCCATCCAGGACTTCCGCGAGA AGCACCGCTCCTCGCCCTTCTTCAACCACCTGTCGGCCATCAGCGAAAGC ATTCCCGCCTTGGGCTGGGTGTGCGTGGAGAAGACCCCGGGTCCCTATGT CAAGGAGATGAACGACGCCGGCCAGTTCTACACGAACCGCGTGCTCAAGG AGTGGAAGGAGAAGGATGTTACGCATGTGGAGTGGGCCCGCGCCTGGGTG CAGACGCTCACCGAACTGCAGGCCTACATCCGGCAGTACCACACCACGGG CTTGGTGTGGTCCGGCAAGGGAGCGGCCCCCGCCGGAGGTGCCCCGCCAC CACCGCCACCCGGTGGTCTGCCCCCACCGCCGCCCATGCTGGATCTGAGT GCCCTCAAGCTGGATAGCGCCGGAGATGATCGCAGCGCCCTCTTCGCCCA GATCAACCAGGGTGCCGACATCACCAAGGGCTTGAAGAAGGTCACTGGCG ACATGCAGACCCATAAAAATCCATCTCTACGCACTGGACCGGCTCCGTTC AAATCGCCAGCCCAGTCGGGCGGCAGCAAGGCCGTTGCTGCTCCATCAGC TGCGCAAGCCAAGGCGCCCGTTTTCGAGCGCGACGGAAAGAAGTGGATCA TCGAGTACCAGAAGAACAACACCGGGCTGTTGGTGGAGAACGCCGAGATG AACAACGTGGTGTATGTGTTCAAGTGTGAGGGATCCACTCTGACCGTCAA GGGCAAGGTGAACAACATCGTCTTCGACTCCTGCAAGAAGTGCTCCCTGC TGTTCGATTCCGTGGTGGCCTCCGTGGAGTTCGTCAACTGCCAGAGCGTG CAGATGCAGGTGCTCGGCTCGGTGCCGACGGTATCGATCGACAAGACCGA CGGCTGCCAGATGTATCTGTCCAAGGACTCGCTGGGCGTGGAGATCGTCA ACTCCAAGTCCTCGGAGATGAACATCCTGTTGCCCGACGACAGCGGCGAT TATACCGAGTTGGCTTTACCGGAGCAGTATAAGACCACGATTGCCGGCAA GACCCTGAAGACTGTGTGCGTGGACAGCCTCGGCTAAGGCGGTTCTCCTC CTCGGGGATCCTGTTCGTTGCTTTTCCAACTGTCGTCAGCAGCAATCATA ATTGTATTTAATCTAAGTGCAAAGTTTTCGTAATTCAAAGATTTTTAGAT CAAACATTTCGTATTGATGATGTTGCCAAACATTGCTGTCCTGGCTCGTG GAAAGTATTTATATAATTTATTTCGATGGAAAAGCGATGGCCACAAACCG AACCCAATGTATTTATATCGAGAGTGTGTTGCAATGAGAAACTGAGCATG AAATCCGAACTTTTGAGCAGACTCTTTACTCGATCATCAGATGTAACTCC TTTTTATATTCTATTTAATAAAATTTAAACTTTTTTATCAGAAAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 1152687..1153236 | 980..431 | 2720 | 99.6 | Minus |
chr2L | 23010047 | chr2L | 1152094..1152618 | 1503..979 | 2625 | 100 | Minus |
chr2L | 23010047 | chr2L | 1151595..1152032 | 1941..1504 | 2190 | 100 | Minus |
chr2L | 23010047 | chr2L | 1153303..1153650 | 431..84 | 1725 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 1157999..1158083 | 85..1 | 425 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1152770..1153319 | 980..431 | 2750 | 100 | Minus |
2L | 23513712 | 2L | 1152177..1152701 | 1503..979 | 2625 | 100 | Minus |
2L | 23513712 | 2L | 1151677..1152115 | 1942..1504 | 2195 | 100 | Minus |
2L | 23513712 | 2L | 1153386..1153733 | 431..84 | 1740 | 100 | Minus |
2L | 23513712 | 2L | 1158079..1158163 | 85..1 | 425 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1152770..1153319 | 980..431 | 2750 | 100 | Minus |
2L | 23513712 | 2L | 1152177..1152701 | 1503..979 | 2625 | 100 | Minus |
2L | 23513712 | 2L | 1151677..1152115 | 1942..1504 | 2195 | 100 | Minus |
2L | 23513712 | 2L | 1153386..1153733 | 431..84 | 1740 | 100 | Minus |
2L | 23513712 | 2L | 1158079..1158163 | 85..1 | 425 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1151595..1152032 | 1504..1941 | 100 | <- | Minus |
chr2L | 1152094..1152617 | 980..1503 | 100 | <- | Minus |
chr2L | 1152688..1153235 | 432..979 | 99 | <- | Minus |
chr2L | 1153303..1153648 | 86..431 | 99 | <- | Minus |
chr2L | 1157999..1158083 | 1..85 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
capt-RB | 850..2352 | 85..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
capt-RB | 850..2352 | 85..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
capt-RB | 850..2352 | 85..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
capt-RB | 850..2352 | 85..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
capt-RB | 850..2352 | 85..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
capt-RA | 102..2042 | 1..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
capt-RA | 102..2042 | 1..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
capt-RA | 100..2040 | 1..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
capt-RA | 102..2042 | 1..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
capt-RA | 100..2040 | 1..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1151678..1152115 | 1504..1941 | 100 | <- | Minus |
2L | 1152177..1152700 | 980..1503 | 100 | <- | Minus |
2L | 1152771..1153318 | 432..979 | 100 | <- | Minus |
2L | 1153386..1153731 | 86..431 | 100 | <- | Minus |
2L | 1158079..1158163 | 1..85 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1151678..1152115 | 1504..1941 | 100 | <- | Minus |
2L | 1152177..1152700 | 980..1503 | 100 | <- | Minus |
2L | 1152771..1153318 | 432..979 | 100 | <- | Minus |
2L | 1153386..1153731 | 86..431 | 100 | <- | Minus |
2L | 1158079..1158163 | 1..85 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1151678..1152115 | 1504..1941 | 100 | <- | Minus |
2L | 1152177..1152700 | 980..1503 | 100 | <- | Minus |
2L | 1152771..1153318 | 432..979 | 100 | <- | Minus |
2L | 1153386..1153731 | 86..431 | 100 | <- | Minus |
2L | 1158079..1158163 | 1..85 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1151678..1152115 | 1504..1941 | 100 | <- | Minus |
arm_2L | 1152177..1152700 | 980..1503 | 100 | <- | Minus |
arm_2L | 1152771..1153318 | 432..979 | 100 | <- | Minus |
arm_2L | 1153386..1153731 | 86..431 | 100 | <- | Minus |
arm_2L | 1158079..1158163 | 1..85 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1158079..1158163 | 1..85 | 100 | Minus | |
2L | 1151678..1152115 | 1504..1941 | 100 | <- | Minus |
2L | 1152177..1152700 | 980..1503 | 100 | <- | Minus |
2L | 1152771..1153318 | 432..979 | 100 | <- | Minus |
2L | 1153386..1153731 | 86..431 | 100 | <- | Minus |
Translation from 0 to 1586
> LD24380.hyp RRCSLRSFSSVLIGIQLQILANSSAAKEDNEPEAKPSAAVDHLESICERL ETLVDRLERTLTAPQPIELPTPTLPPPPAEEEEALPVFEKAETPPPPPSP PSSNMSVAGFEDIVAGPLSQYLTLSAKIGGDVAQHAELVKSAFGSQLQYV TLATQIAQPAQPKQAELLKPTSTQISAIQDFREKHRSSPFFNHLSAISES IPALGWVCVEKTPGPYVKEMNDAGQFYTNRVLKEWKEKDVTHVEWARAWV QTLTELQAYIRQYHTTGLVWSGKGAAPAGGAPPPPPPGGLPPPPPMLDLS ALKLDSAGDDRSALFAQINQGADITKGLKKVTGDMQTHKNPSLRTGPAPF KSPAQSGGSKAVAAPSAAQAKAPVFERDGKKWIIEYQKNNTGLLVENAEM NNVVYVFKCEGSTLTVKGKVNNIVFDSCKKCSLLFDSVVASVEFVNCQSV QMQVLGSVPTVSIDKTDGCQMYLSKDSLGVEIVNSKSSEMNILLPDDSGD YTELALPEQYKTTIAGKTLKTVCVDSLG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
capt-PB | 783 | CG33979-PB | 279..783 | 24..528 | 2610 | 99.4 | Plus |
capt-PC | 424 | CG33979-PC | 1..424 | 105..528 | 2200 | 100 | Plus |
capt-PA | 424 | CG33979-PA | 1..424 | 105..528 | 2200 | 100 | Plus |
Translation from 312 to 1586
> LD24380.pep MSVAGFEDIVAGPLSQYLTLSAKIGGDVAQHAELVKSAFGSQLQYVTLAT QIAQPAQPKQAELLKPTSTQISAIQDFREKHRSSPFFNHLSAISESIPAL GWVCVEKTPGPYVKEMNDAGQFYTNRVLKEWKEKDVTHVEWARAWVQTLT ELQAYIRQYHTTGLVWSGKGAAPAGGAPPPPPPGGLPPPPPMLDLSALKL DSAGDDRSALFAQINQGADITKGLKKVTGDMQTHKNPSLRTGPAPFKSPA QSGGSKAVAAPSAAQAKAPVFERDGKKWIIEYQKNNTGLLVENAEMNNVV YVFKCEGSTLTVKGKVNNIVFDSCKKCSLLFDSVVASVEFVNCQSVQMQV LGSVPTVSIDKTDGCQMYLSKDSLGVEIVNSKSSEMNILLPDDSGDYTEL ALPEQYKTTIAGKTLKTVCVDSLG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14733-PA | 778 | GF14733-PA | 357..778 | 1..424 | 1952 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24610-PA | 797 | GG24610-PA | 376..797 | 1..424 | 2249 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10564-PA | 829 | GH10564-PA | 405..829 | 1..424 | 1819 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
capt-PC | 424 | CG33979-PC | 1..424 | 1..424 | 2200 | 100 | Plus |
capt-PA | 424 | CG33979-PA | 1..424 | 1..424 | 2200 | 100 | Plus |
capt-PB | 783 | CG33979-PB | 360..783 | 1..424 | 2200 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21941-PA | 821 | GI21941-PA | 400..821 | 1..424 | 1793 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15023-PA | 666 | GL15023-PA | 393..639 | 3..249 | 1081 | 93.1 | Plus |
Dper\GL15032-PA | 129 | GL15032-PA | 1..129 | 296..424 | 650 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25429-PA | 812 | GA25429-PA | 391..812 | 1..424 | 1850 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16624-PA | 759 | GM16624-PA | 363..759 | 1..424 | 2083 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22924-PA | 786 | GD22924-PA | 363..786 | 1..424 | 2258 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17828-PA | 786 | GJ17828-PA | 364..786 | 1..424 | 1798 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24366-PA | 812 | GK24366-PA | 391..812 | 1..424 | 1883 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15744-PA | 795 | GE15744-PA | 373..795 | 1..424 | 2253 | 99.1 | Plus |