Clone LD24412 Report

Search the DGRC for LD24412

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:244
Well:12
Vector:pOT2
Associated Gene/TranscriptpAbp-RA
Protein status:LD24412.pep: gold
Preliminary Size:2247
Sequenced Size:2265

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5119 2001-01-01 Release 2 assignment
CG5119 2002-05-17 Blastp of sequenced clone
CG5119 2003-01-01 Sim4 clustering to Release 3
pAbp 2008-04-29 Release 5.5 accounting
pAbp 2008-08-15 Release 5.9 accounting
pAbp 2008-12-18 5.12 accounting

Clone Sequence Records

LD24412.complete Sequence

2265 bp (2265 high quality bases) assembled on 2002-05-17

GenBank Submission: AY118528

> LD24412.complete
AGAGTCCGTTTACGTGAGCGGTCGTGGATTCGCTTTCAGCACACGGCTTA
TCACATATTTTTTGTGAAGAAAAAACATATAAAAAATAAAAAAAAATATT
AAAACACAAAAACGTAACAAAAAAAATTGTAAAAAGTAGCAAAAAAAATC
GAGCGTGTTTGAGAAGTAGACCTGATCACCAAATATGGCTTCTCTATACG
TCGGTGATCTCCCACAGGACGTCAACGAATCGGGACTTTTTGACAAGTTC
TCGTCTGCTGGTCCAGTGCTGTCCATTCGTGTCTGCCGCGATGTGATTAC
CCGTCGCTCGTTGGGCTATGCCTACGTCAACTTCCAGCAGCCAGCCGATG
CTGAGCGTGCTTTGGACACCATGAACTTTGACCTGGTTCGCAACAAGCCC
ATTCGCATTATGTGGTCTCAGCGTGATCCTTCTCTTCGTCGCTCAGGTGT
GGGCAACGTGTTCATCAAGAACTTAGATAGGGCCATCGACAACAAGGCAA
TCTACGACACTTTCTCCGCCTTCGGCAACATTTTAAGCTGCAAGGTAGCC
ACCGATGAAAAGGGCAACTCAAAGGGCTATGGATTCGTCCACTTCGAGAC
CGAGGAGGCCGCAAACACGTCCATCGACAAAGTCAATGGCATGTTGCTCA
ACGGCAAGAAGGTCTACGTGGGTAAGTTCATCCCGCGCAAGGAGCGCGAG
AAGGAGCTGGGCGAGAAGGCTAAGCTCTTCACCAATGTATATGTGAAGAA
CTTCACTGAGGATTTCGACGATGAAAAACTGAAGGAATTCTTTGAGCCCT
ACGGCAAGATAACCAGCTACAAGGTCATGTCCAAGGAGGATGGCAAGAGC
AAGGGCTTCGGATTCGTTGCATTCGAGACAACAGAGGCTGCTGAGGCGGC
CGTTCAGGCTCTCAATGGCAAGGACATGGGAGAGGGCAAGTCCCTGTACG
TGGCTCGTGCCCAGAAGAAGGCCGAACGCCAGCAGGAGCTGAAGCGCAAG
TTCGAGGAACTGAAGCAGAAGCGTCACGAGTCTGTGTTCGGCGTTAACTT
GTACGTTAAGAACCTGGACGACACAATCGATGACGATCGTCTGCGCATCG
CGTTCTCTCCATACGGCAACATCACATCGGCCAAGGTCATGACCGATGAG
GAGGGTCGCTCCAAGGGATTCGGCTTCGTGTGCTTCAATGCCGCAAGCGA
GGCTACCTGCGCCGTCACCGAGCTGAACGGTCGCGTCGTCGGCAGTAAGC
CGTTGTACGTTGCTTTGGCCCAAAGGAAGGAGGAGCGCAAGGCTCATCTC
GCCTCGCAGTACATGCGTCACATGACCGGCATGCGTATGCAGCAGCTGGG
ACAGATCTACCAGCCCAACGCGGCTAGCGGCTTCTTTGTGCCGACCCTTC
CGTCAAATCAGCGTTTCTTCGGTTCCCAGGTGGCCACTCAGATGAGAAAC
ACACCCCGCTGGGTGCCCCAGGTGCGTCCCCCAGCAGCCATACAGGGTGT
CCAGGCCGGAGCTGCCGCTGCTGGTGGCTTCCAGGGCACAGCCGGTGCGG
TGCCCACTCAGTTCCGTTCGGCTGCTGCTGGCGCTCGCGGGGCACAGCCT
CAGGTGCAGGGCACACATGCCGCCGCTGCTGCGGCTAACAACATGCGCAA
CACTGGAGCACGCGCTATTACTGGCCAGCAAACTGCAGCACCCAACATGC
AGATCCCCGGAGCCCAAATCGCTGGCGGTGCCCAGCAGCGTACTTCCAAC
TATAAGTACACCTCAAACATGCGCAATCCTCCAGTGCCACAGTTGCATCA
GACCCAGCCAATTCCACAGCAATTGCAAGGAAAGAATTCTGAGAAGCTCA
TTGCCTCGTTGCTGGCCAACGCCAAGCCGCAGGAGCAGAAACAGATCCTG
GGCGAGCGTCTGTATCCGATGATTGAGCATATGCACGCCAATTTGGCTGG
TAAGATCACCGGCATGTTGTTGGAGATCGAAAACTCTGAGCTCTTGCACA
TGATCGAGGATCAGGAGGCCCTTAAGGCCAAGGTGGAGGAGGCTGTGGCC
GTGCTTCAGGTGCACCGCGTCACCGAGCCCGCCAACTAAGCTCGAACAGC
TCAAGCGTATGAACATTTTACAAGAACACTTTACACCCAAAAATTTTCCA
CTAATCTTTCAATACATAAACAAAAAAATTGCAAAAGAGTTAAAATAAAA
ACGAAAAAATGGAAAGCAAACTGTGCAGAGAACAGAAGAATAGAAAGAAA
AAAAAAAAAAAAAAA

LD24412.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:06:14
Subject Length Description Subject Range Query Range Score Percent Strand
pAbp-RB 3541 pAbp-RB 670..2682 166..2178 10035 99.9 Plus
pAbp.n 3768 pAbp.n 670..2682 166..2178 10035 99.9 Plus
pAbp.b 4497 pAbp.b 670..2682 166..2178 10035 99.9 Plus
pAbp-RB 3541 pAbp-RB 43..210 1..168 840 100 Plus
pAbp.n 3768 pAbp.n 43..210 1..168 840 100 Plus
pAbp.b 4497 pAbp.b 43..210 1..168 840 100 Plus
pAbp-RB 3541 pAbp-RB 3295..3392 2168..2265 445 96.9 Plus
pAbp.n 3768 pAbp.n 3295..3392 2168..2265 445 96.9 Plus
pAbp.b 4497 pAbp.b 3295..3392 2168..2265 445 96.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:35:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14030561..14032046 350..1835 7355 99.7 Plus
chr2R 21145070 chr2R 14032116..14032423 1836..2143 1525 99.7 Plus
chr2R 21145070 chr2R 14028628..14028817 166..355 935 99.5 Plus
chr2R 21145070 chr2R 14027922..14028089 1..168 840 100 Plus
chr2R 21145070 chr2R 14033138..14033217 2168..2247 400 100 Plus
chr2R 21145070 chr2R 20410861..20411040 643..464 225 75 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:15:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:35:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18143412..18144897 350..1835 7430 100 Plus
2R 25286936 2R 18144967..18145274 1836..2143 1540 100 Plus
2R 25286936 2R 18141488..18141677 166..355 935 99.5 Plus
2R 25286936 2R 18140790..18140957 1..168 840 100 Plus
2R 25286936 2R 24524945..24525124 643..464 225 75 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:37:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18144611..18146096 350..1835 7430 100 Plus
2R 25260384 2R 18146166..18146473 1836..2143 1540 100 Plus
2R 25260384 2R 18142687..18142876 166..355 935 99.4 Plus
2R 25260384 2R 18141989..18142156 1..168 840 100 Plus
2R 25260384 2R 18147188..18147285 2168..2265 445 96.9 Plus
2R 25260384 2R 24526144..24526323 643..464 225 75 Minus
2R 25260384 2R 18146541..18146575 2144..2178 145 94.2 Plus
Blast to na_te.dros performed on 2019-03-16 16:35:25 has no hits.

LD24412.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:36:08 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14028070..14028086 149..165 100 -> Plus
chr2R 14028628..14028812 166..350 100 -> Plus
chr2R 14030562..14032046 351..1835 99 -> Plus
chr2R 14032116..14032423 1836..2143 99 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:02:25 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
pAbp-RF 1..1905 185..2089 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:48:49 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
pAbp-RD 1..1905 185..2089 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:19:06 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
pAbp-RC 1..1905 185..2089 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:41:23 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
pAbp-RF 1..1905 185..2089 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:34:49 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
pAbp-RC 1..1905 185..2089 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:25:36 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
pAbp-RF 54..2218 1..2165 100 -> Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:48:48 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
pAbp-RF 54..2218 1..2165 100 -> Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:06 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
pAbp-RA 14..2198 1..2183 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:41:23 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
pAbp-RF 54..2218 1..2165 100 -> Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:34:49 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
pAbp-RA 14..2198 1..2183 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:36:08 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18141488..18141672 166..350 100 -> Plus
2R 18140790..18140954 1..165 100 -> Plus
2R 18143413..18144897 351..1835 100 -> Plus
2R 18144967..18145274 1836..2143 100 -> Plus
2R 18145342..18145363 2144..2165 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:36:08 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18141488..18141672 166..350 100 -> Plus
2R 18140790..18140954 1..165 100 -> Plus
2R 18143413..18144897 351..1835 100 -> Plus
2R 18144967..18145274 1836..2143 100 -> Plus
2R 18145342..18145363 2144..2165 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:36:08 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18141488..18141672 166..350 100 -> Plus
2R 18140790..18140954 1..165 100 -> Plus
2R 18143413..18144897 351..1835 100 -> Plus
2R 18144967..18145274 1836..2143 100 -> Plus
2R 18145342..18145363 2144..2165 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:06 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14028295..14028459 1..165 100 -> Plus
arm_2R 14028993..14029177 166..350 100 -> Plus
arm_2R 14030918..14032402 351..1835 100 -> Plus
arm_2R 14032472..14032779 1836..2143 100 -> Plus
arm_2R 14032847..14032868 2144..2165 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:13:39 Download gff for LD24412.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18144612..18146096 351..1835 100 -> Plus
2R 18146166..18146473 1836..2143 100 -> Plus
2R 18146541..18146562 2144..2165 100 -> Plus
2R 18141989..18142153 1..165 100 -> Plus
2R 18142687..18142871 166..350 100 -> Plus

LD24412.pep Sequence

Translation from 184 to 2088

> LD24412.pep
MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNF
QQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRA
IDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKV
NGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLK
EFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGE
GKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDD
DRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGR
VVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQIYQPNAASGF
FVPTLPSNQRFFGSQVATQMRNTPRWVPQVRPPAAIQGVQAGAAAAGGFQ
GTAGAVPTQFRSAAAGARGAQPQVQGTHAAAAAANNMRNTGARAITGQQT
AAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK
NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIEN
SELLHMIEDQEALKAKVEEAVAVLQVHRVTEPAN*

LD24412.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:37:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12652-PA 639 GF12652-PA 1..639 1..634 2954 90.8 Plus
Dana\GF11244-PA 307 GF11244-PA 103..305 75..285 635 57.3 Plus
Dana\GF11244-PA 307 GF11244-PA 115..305 185..392 325 36.8 Plus
Dana\GF20385-PA 341 GF20385-PA 13..192 2..180 280 35.2 Plus
Dana\GF21392-PA 353 GF21392-PA 27..349 91..365 256 26 Plus
Dana\GF16693-PA 710 GF16693-PA 167..428 2..274 242 26.6 Plus
Dana\GF11244-PA 307 GF11244-PA 115..292 4..178 193 26.3 Plus
Dana\GF21392-PA 353 GF21392-PA 26..225 183..381 186 27.4 Plus
Dana\GF21392-PA 353 GF21392-PA 27..190 3..152 185 27.7 Plus
Dana\GF20385-PA 341 GF20385-PA 5..183 82..265 181 28.9 Plus
Dana\GF16693-PA 710 GF16693-PA 169..451 92..407 175 24.9 Plus
Dana\GF20385-PA 341 GF20385-PA 15..183 185..368 160 25.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:37:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21846-PA 635 GG21846-PA 1..635 1..634 3341 98.1 Plus
Dere\GG19920-PA 307 GG19920-PA 115..305 92..285 637 60.3 Plus
Dere\GG19920-PA 307 GG19920-PA 115..305 185..392 326 36.8 Plus
Dere\GG19577-PA 339 GG19577-PA 13..192 2..180 279 35.2 Plus
Dere\GG17743-PA 353 GG17743-PA 27..351 91..367 252 25.5 Plus
Dere\GG24121-PA 666 GG24121-PA 169..430 2..274 239 26.6 Plus
Dere\GG19920-PA 307 GG19920-PA 115..292 4..178 199 26.8 Plus
Dere\GG17743-PA 353 GG17743-PA 27..190 3..152 189 28.3 Plus
Dere\GG17743-PA 353 GG17743-PA 26..225 183..381 182 26.9 Plus
Dere\GG19577-PA 339 GG19577-PA 5..183 82..265 180 28.9 Plus
Dere\GG24121-PA 666 GG24121-PA 171..453 92..407 173 25.2 Plus
Dere\GG19577-PA 339 GG19577-PA 15..183 185..368 160 25.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:37:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21052-PA 645 GH21052-PA 1..645 1..634 2823 87.3 Plus
Dgri\GH22019-PA 304 GH22019-PA 112..302 92..285 628 59.8 Plus
Dgri\GH22019-PA 304 GH22019-PA 112..302 185..392 329 37.3 Plus
Dgri\GH17589-PA 340 GH17589-PA 13..192 2..180 285 35.7 Plus
Dgri\GH24423-PA 353 GH24423-PA 27..351 91..367 252 25.5 Plus
Dgri\GH17270-PA 532 GH17270-PA 167..428 2..274 233 25.7 Plus
Dgri\GH22019-PA 304 GH22019-PA 112..289 4..178 199 26.8 Plus
Dgri\GH24423-PA 353 GH24423-PA 27..190 3..152 189 28.3 Plus
Dgri\GH17589-PA 340 GH17589-PA 5..183 82..265 185 29.4 Plus
Dgri\GH24423-PA 353 GH24423-PA 26..225 183..381 182 26.9 Plus
Dgri\GH17589-PA 340 GH17589-PA 15..183 185..368 165 26.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:38
Subject Length Description Subject Range Query Range Score Percent Strand
pAbp-PA 634 CG5119-PA 1..634 1..634 3245 100 Plus
pAbp-PB 634 CG5119-PB 1..634 1..634 3245 100 Plus
pAbp-PC 634 CG5119-PC 1..634 1..634 3245 100 Plus
CG4612-PC 307 CG4612-PC 113..305 90..285 628 60.2 Plus
CG4612-PA 307 CG4612-PA 113..305 90..285 628 60.2 Plus
CG4612-PC 307 CG4612-PC 115..305 185..392 328 36.8 Plus
CG4612-PA 307 CG4612-PA 115..305 185..392 328 36.8 Plus
Spx-PA 347 CG3780-PA 13..192 2..180 269 34.6 Plus
Rbp9-PH 439 CG3151-PH 111..438 3..368 263 25.8 Plus
Rbp9-PG 439 CG3151-PG 111..438 3..368 263 25.8 Plus
Rbp9-PF 439 CG3151-PF 111..438 3..368 263 25.8 Plus
Rbp9-PE 439 CG3151-PE 111..438 3..368 263 25.8 Plus
Rbp9-PJ 684 CG3151-PJ 111..438 3..368 263 25.8 Plus
Rbp9-PK 444 CG3151-PK 111..443 3..368 259 26.3 Plus
Rbp9-PI 444 CG3151-PI 111..443 3..368 259 26.3 Plus
Rbp9-PB 444 CG3151-PB 111..443 3..368 259 26.3 Plus
Rbp9-PC 444 CG3151-PC 111..443 3..368 259 26.3 Plus
fne-PJ 353 CG4396-PJ 27..349 91..365 251 26 Plus
fne-PI 353 CG4396-PI 27..349 91..365 251 26 Plus
fne-PD 353 CG4396-PD 27..349 91..365 251 26 Plus
Syp-PC 529 CG17838-PC 166..445 4..297 249 25.9 Plus
Syp-PM 699 CG17838-PM 200..479 4..297 249 25.9 Plus
fne-PE 356 CG4396-PE 27..352 91..365 248 25.7 Plus
fne-PH 356 CG4396-PH 27..352 91..365 248 25.7 Plus
fne-PG 356 CG4396-PG 27..352 91..365 248 25.7 Plus
fne-PB 356 CG4396-PB 27..352 91..365 248 25.7 Plus
fne-PA 356 CG4396-PA 27..352 91..365 248 25.7 Plus
fne-PC 356 CG4396-PC 27..352 91..365 248 25.7 Plus
Syp-PJ 761 CG17838-PJ 208..467 4..274 247 26.3 Plus
Syp-PF 529 CG17838-PF 166..445 4..297 243 26.4 Plus
Syp-PH 534 CG17838-PH 171..450 4..297 243 26.4 Plus
Syp-PA 563 CG17838-PA 200..479 4..297 243 26.4 Plus
Syp-PR 569 CG17838-PR 166..445 4..297 243 26.4 Plus
Syp-PE 571 CG17838-PE 208..487 4..297 243 26.4 Plus
Syp-PI 603 CG17838-PI 200..479 4..297 243 26.4 Plus
Syp-PO 611 CG17838-PO 208..487 4..297 243 26.4 Plus
Syp-PP 665 CG17838-PP 166..445 4..297 243 26.4 Plus
Syp-PN 665 CG17838-PN 166..445 4..297 243 26.4 Plus
Syp-PT 670 CG17838-PT 200..479 4..297 243 26.4 Plus
Syp-PV 678 CG17838-PV 208..487 4..297 243 26.4 Plus
Syp-PS 699 CG17838-PS 200..479 4..297 243 26.4 Plus
Syp-PD 707 CG17838-PD 208..487 4..297 243 26.4 Plus
Syp-PL 711 CG17838-PL 166..445 4..297 243 26.4 Plus
Syp-PB 711 CG17838-PB 166..445 4..297 243 26.4 Plus
Syp-PK 753 CG17838-PK 200..459 4..274 241 26.8 Plus
Syp-PQ 761 CG17838-PQ 208..467 4..274 241 26.8 Plus
ssx-PE 443 CG3056-PE 93..274 183..382 226 33.8 Plus
ssx-PE 443 CG3056-PE 82..241 79..244 226 32.1 Plus
ssx-PB 443 CG3056-PB 82..241 79..244 226 32.1 Plus
ssx-PB 443 CG3056-PB 93..274 183..382 226 33.8 Plus
ssx-PD 485 CG3056-PD 82..241 79..244 226 32.1 Plus
ssx-PD 485 CG3056-PD 93..274 183..382 226 33.8 Plus
Rox8-PC 464 CG5422-PC 8..282 3..248 224 25.8 Plus
Rox8-PB 464 CG5422-PB 8..282 3..248 224 25.8 Plus
Rox8-PH 470 CG5422-PH 8..282 3..248 224 25.8 Plus
Rox8-PG 470 CG5422-PG 8..282 3..248 224 25.8 Plus
Rbp9-PH 439 CG3151-PH 110..309 183..399 221 29.4 Plus
Rbp9-PG 439 CG3151-PG 110..309 183..399 221 29.4 Plus
Rbp9-PF 439 CG3151-PF 110..309 183..399 221 29.4 Plus
Rbp9-PE 439 CG3151-PE 110..309 183..399 221 29.4 Plus
Rbp9-PJ 684 CG3151-PJ 110..309 183..399 221 29.4 Plus
Rbp9-PK 444 CG3151-PK 110..314 183..399 217 29.6 Plus
Rbp9-PI 444 CG3151-PI 110..314 183..399 217 29.6 Plus
Rbp9-PB 444 CG3151-PB 110..314 183..399 217 29.6 Plus
Rbp9-PC 444 CG3151-PC 110..314 183..399 217 29.6 Plus
CG4612-PC 307 CG4612-PC 115..292 4..178 206 26.8 Plus
CG4612-PA 307 CG4612-PA 115..292 4..178 206 26.8 Plus
ssx-PE 443 CG3056-PE 94..247 3..157 199 28.8 Plus
ssx-PB 443 CG3056-PB 94..247 3..157 199 28.8 Plus
ssx-PD 485 CG3056-PD 94..247 3..157 199 28.8 Plus
Rox8-PC 464 CG5422-PC 9..445 92..486 199 23.9 Plus
Rox8-PB 464 CG5422-PB 9..445 92..486 199 23.9 Plus
Rox8-PH 470 CG5422-PH 9..468 92..506 195 23.5 Plus
Rox8-PG 470 CG5422-PG 9..468 92..506 195 23.5 Plus
fne-PJ 353 CG4396-PJ 27..195 3..157 194 28.1 Plus
fne-PI 353 CG4396-PI 27..195 3..157 194 28.1 Plus
fne-PD 353 CG4396-PD 27..195 3..157 194 28.1 Plus
fne-PE 356 CG4396-PE 27..198 3..157 191 27.6 Plus
fne-PH 356 CG4396-PH 27..198 3..157 191 27.6 Plus
fne-PG 356 CG4396-PG 27..198 3..157 191 27.6 Plus
fne-PB 356 CG4396-PB 27..198 3..157 191 27.6 Plus
fne-PA 356 CG4396-PA 27..198 3..157 191 27.6 Plus
fne-PC 356 CG4396-PC 27..198 3..157 191 27.6 Plus
fne-PJ 353 CG4396-PJ 26..225 183..381 185 26.9 Plus
fne-PI 353 CG4396-PI 26..225 183..381 185 26.9 Plus
fne-PD 353 CG4396-PD 26..225 183..381 185 26.9 Plus
Syp-PR 569 CG17838-PR 166..536 92..472 184 24.5 Plus
Syp-PI 603 CG17838-PI 200..570 92..472 184 24.5 Plus
Syp-PO 611 CG17838-PO 208..578 92..472 184 24.5 Plus
fne-PE 356 CG4396-PE 26..228 183..381 182 26.6 Plus
fne-PH 356 CG4396-PH 26..228 183..381 182 26.6 Plus
fne-PG 356 CG4396-PG 26..228 183..381 182 26.6 Plus
fne-PB 356 CG4396-PB 26..228 183..381 182 26.6 Plus
fne-PA 356 CG4396-PA 26..228 183..381 182 26.6 Plus
fne-PC 356 CG4396-PC 26..228 183..381 182 26.6 Plus
Spx-PA 347 CG3780-PA 5..165 82..246 174 29.8 Plus
Syp-PC 529 CG17838-PC 166..433 92..387 174 24.7 Plus
Syp-PM 699 CG17838-PM 200..467 92..387 174 24.7 Plus
Syp-PJ 761 CG17838-PJ 208..475 92..387 174 24.7 Plus
Syp-PF 529 CG17838-PF 166..433 92..387 173 24.9 Plus
Syp-PH 534 CG17838-PH 171..438 92..387 173 24.9 Plus
Syp-PA 563 CG17838-PA 200..467 92..387 173 24.9 Plus
Syp-PE 571 CG17838-PE 208..475 92..387 173 24.9 Plus
Syp-PP 665 CG17838-PP 166..433 92..387 173 24.9 Plus
Syp-PN 665 CG17838-PN 166..433 92..387 173 24.9 Plus
Syp-PT 670 CG17838-PT 200..467 92..387 173 24.9 Plus
Syp-PV 678 CG17838-PV 208..475 92..387 173 24.9 Plus
Syp-PS 699 CG17838-PS 200..467 92..387 173 24.9 Plus
Syp-PD 707 CG17838-PD 208..475 92..387 173 24.9 Plus
Syp-PL 711 CG17838-PL 166..433 92..387 173 24.9 Plus
Syp-PB 711 CG17838-PB 166..433 92..387 173 24.9 Plus
Syp-PK 753 CG17838-PK 200..467 92..387 173 24.9 Plus
Syp-PQ 761 CG17838-PQ 208..475 92..387 173 24.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18654-PA 645 GI18654-PA 1..645 1..634 2905 87.4 Plus
Dmoj\GI19109-PA 300 GI19109-PA 108..298 92..285 644 61.3 Plus
Dmoj\GI19109-PA 300 GI19109-PA 108..298 185..392 333 37.3 Plus
Dmoj\GI16317-PA 340 GI16317-PA 13..192 2..180 286 35.7 Plus
Dmoj\GI16282-PA 353 GI16282-PA 27..351 91..367 252 25.5 Plus
Dmoj\GI10594-PA 721 GI10594-PA 223..484 2..274 234 26.2 Plus
Dmoj\GI19109-PA 300 GI19109-PA 108..285 4..178 206 27.4 Plus
Dmoj\GI16282-PA 353 GI16282-PA 27..190 3..152 189 28.3 Plus
Dmoj\GI16317-PA 340 GI16317-PA 5..183 82..265 185 29.4 Plus
Dmoj\GI16282-PA 353 GI16282-PA 26..225 183..381 182 26.9 Plus
Dmoj\GI10594-PA 721 GI10594-PA 225..522 92..433 173 24.8 Plus
Dmoj\GI16317-PA 340 GI16317-PA 54..183 223..368 165 29.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:38:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11548-PA 640 GL11548-PA 1..640 1..634 2812 89.7 Plus
Dper\GL20391-PA 296 GL20391-PA 102..294 90..285 642 60.7 Plus
Dper\GL20391-PA 296 GL20391-PA 104..294 185..392 329 37.3 Plus
Dper\GL21313-PA 341 GL21313-PA 13..192 2..180 282 35.7 Plus
Dper\GL14245-PA 618 GL14245-PA 116..286 86..261 236 31.3 Plus
Dper\GL14245-PA 618 GL14245-PA 120..296 183..377 233 34.7 Plus
Dper\GL14245-PA 618 GL14245-PA 120..271 2..154 223 31.2 Plus
Dper\GL26299-PA 678 GL26299-PA 110..297 183..378 218 30.4 Plus
Dper\GL26299-PA 678 GL26299-PA 111..259 91..245 208 31.8 Plus
Dper\GL20391-PA 296 GL20391-PA 104..281 4..178 203 27.4 Plus
Dper\GL26299-PA 678 GL26299-PA 111..259 3..152 200 31.8 Plus
Dper\GL21313-PA 341 GL21313-PA 5..183 82..265 181 28.9 Plus
Dper\GL21313-PA 341 GL21313-PA 15..183 185..368 161 25.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:38:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18673-PA 640 GA18673-PA 1..640 1..634 2806 89.5 Plus
Dpse\GA18301-PA 296 GA18301-PA 102..294 90..285 642 60.7 Plus
Dpse\GA18301-PA 296 GA18301-PA 104..294 185..392 329 37.3 Plus
Dpse\GA17684-PA 341 GA17684-PA 13..192 2..180 283 35.7 Plus
Dpse\GA22283-PA 353 GA22283-PA 27..349 91..365 252 25.7 Plus
Dpse\GA27045-PA 674 GA27045-PA 167..428 2..274 242 27 Plus
Dpse\GA18301-PA 296 GA18301-PA 104..281 4..178 203 27.4 Plus
Dpse\GA22283-PA 353 GA22283-PA 27..190 3..152 189 28.3 Plus
Dpse\GA22283-PA 353 GA22283-PA 26..225 183..381 182 26.9 Plus
Dpse\GA17684-PA 341 GA17684-PA 5..183 82..265 181 28.9 Plus
Dpse\GA27045-PA 674 GA27045-PA 169..466 92..433 168 24.2 Plus
Dpse\GA17684-PA 341 GA17684-PA 15..183 185..368 161 25.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:38:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21847-PA 634 GM21847-PA 1..634 1..634 3405 100 Plus
Dsec\GM11822-PA 307 GM11822-PA 115..305 92..285 635 60.3 Plus
Dsec\GM11822-PA 307 GM11822-PA 115..305 185..392 326 36.8 Plus
Dsec\GM12470-PA 299 GM12470-PA 13..192 2..180 275 34.6 Plus
Dsec\GM11591-PA 379 GM11591-PA 53..375 91..365 250 25.7 Plus
Dsec\GM19131-PA 488 GM19131-PA 93..269 183..377 234 34.7 Plus
Dsec\GM19131-PA 488 GM19131-PA 89..241 86..244 230 32.9 Plus
Dsec\GM19131-PA 488 GM19131-PA 93..247 2..157 204 28.7 Plus
Dsec\GM11822-PA 307 GM11822-PA 115..292 4..178 199 26.8 Plus
Dsec\GM11591-PA 379 GM11591-PA 53..216 3..152 187 28.3 Plus
Dsec\GM12470-PA 299 GM12470-PA 5..202 82..284 180 27.7 Plus
Dsec\GM11591-PA 379 GM11591-PA 52..251 183..381 180 26.9 Plus
Dsec\GM12470-PA 299 GM12470-PA 15..183 185..368 155 25.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:38:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11341-PA 379 GD11341-PA 1..377 1..377 2025 100 Plus
Dsim\GD11342-PA 148 GD11342-PA 1..148 487..634 779 100 Plus
Dsim\GD24944-PA 307 GD24944-PA 115..305 92..285 635 60.3 Plus
Dsim\GD24944-PA 307 GD24944-PA 115..305 185..392 326 36.8 Plus
Dsim\GD18328-PA 824 GD18328-PA 8..260 3..248 241 27.6 Plus
Dsim\GD18328-PA 824 GD18328-PA 8..265 91..352 223 25.6 Plus
Dsim\GD11341-PA 379 GD11341-PA 182..378 1..181 205 30.2 Plus
Dsim\GD16475-PA 466 GD16475-PA 146..295 3..152 205 30.3 Plus
Dsim\GD24944-PA 307 GD24944-PA 115..292 4..178 199 26.8 Plus
Dsim\GD16475-PA 466 GD16475-PA 145..338 183..382 193 26.8 Plus
Dsim\GD16475-PA 466 GD16475-PA 146..295 91..245 182 29.1 Plus
Dsim\GD18328-PA 824 GD18328-PA 8..174 184..365 163 25.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:38:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21671-PA 645 GJ21671-PA 1..645 1..634 2848 88.2 Plus
Dvir\GJ22239-PA 301 GJ22239-PA 109..299 92..285 634 60.3 Plus
Dvir\GJ22239-PA 301 GJ22239-PA 109..299 185..392 328 37.3 Plus
Dvir\GJ15655-PA 340 GJ15655-PA 13..192 2..180 285 35.7 Plus
Dvir\GJ16518-PA 353 GJ16518-PA 27..351 91..367 252 25.5 Plus
Dvir\GJ22950-PA 789 GJ22950-PA 167..428 2..274 234 26.2 Plus
Dvir\GJ22239-PA 301 GJ22239-PA 109..286 4..178 198 26.8 Plus
Dvir\GJ16518-PA 353 GJ16518-PA 27..190 3..152 189 28.3 Plus
Dvir\GJ15655-PA 340 GJ15655-PA 5..183 82..265 185 29.4 Plus
Dvir\GJ16518-PA 353 GJ16518-PA 26..225 183..381 182 26.9 Plus
Dvir\GJ22950-PA 789 GJ22950-PA 169..466 92..433 174 24.8 Plus
Dvir\GJ15655-PA 340 GJ15655-PA 15..183 185..368 165 26.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:38:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19652-PA 638 GK19652-PA 1..638 1..634 2777 88.1 Plus
Dwil\GK19472-PA 297 GK19472-PA 105..295 92..285 639 60.8 Plus
Dwil\GK19472-PA 297 GK19472-PA 105..295 185..392 332 37.3 Plus
Dwil\GK19717-PA 339 GK19717-PA 13..192 2..180 284 35.7 Plus
Dwil\GK25647-PA 353 GK25647-PA 27..351 91..367 252 25.5 Plus
Dwil\GK22469-PA 731 GK22469-PA 167..428 2..274 235 26.2 Plus
Dwil\GK19472-PA 297 GK19472-PA 105..282 4..178 204 27.4 Plus
Dwil\GK25647-PA 353 GK25647-PA 27..190 3..152 189 28.3 Plus
Dwil\GK19717-PA 339 GK19717-PA 5..183 82..265 185 28.9 Plus
Dwil\GK25647-PA 353 GK25647-PA 26..225 183..381 182 26.9 Plus
Dwil\GK19717-PA 339 GK19717-PA 15..183 185..368 164 26.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:38:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11925-PA 634 GE11925-PA 1..634 1..634 3370 98.7 Plus
Dyak\GE11444-PA 307 GE11444-PA 115..305 92..285 634 60.3 Plus
Dyak\GE11444-PA 307 GE11444-PA 115..305 185..392 326 36.8 Plus
Dyak\GE16738-PA 339 GE16738-PA 13..192 2..180 279 35.2 Plus
Dyak\fne-PA 353 GE17033-PA 27..351 91..367 252 25.5 Plus
Dyak\GE25686-PA 747 GE25686-PA 202..483 2..297 239 26.2 Plus
Dyak\GE11444-PA 307 GE11444-PA 115..292 4..178 199 26.8 Plus
Dyak\fne-PA 353 GE17033-PA 27..190 3..152 189 28.3 Plus
Dyak\fne-PA 353 GE17033-PA 26..225 183..381 182 26.9 Plus
Dyak\GE16738-PA 339 GE16738-PA 5..183 82..265 180 28.9 Plus
Dyak\GE25686-PA 747 GE25686-PA 204..486 92..407 174 25.2 Plus
Dyak\GE16738-PA 339 GE16738-PA 15..183 185..368 160 25.7 Plus

LD24412.hyp Sequence

Translation from 184 to 2088

> LD24412.hyp
MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNF
QQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRA
IDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKV
NGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLK
EFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGE
GKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDD
DRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGR
VVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQIYQPNAASGF
FVPTLPSNQRFFGSQVATQMRNTPRWVPQVRPPAAIQGVQAGAAAAGGFQ
GTAGAVPTQFRSAAAGARGAQPQVQGTHAAAAAANNMRNTGARAITGQQT
AAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK
NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIEN
SELLHMIEDQEALKAKVEEAVAVLQVHRVTEPAN*

LD24412.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:24:20
Subject Length Description Subject Range Query Range Score Percent Strand
pAbp-PA 634 CG5119-PA 1..634 1..634 3245 100 Plus
pAbp-PB 634 CG5119-PB 1..634 1..634 3245 100 Plus
pAbp-PC 634 CG5119-PC 1..634 1..634 3245 100 Plus
CG4612-PC 307 CG4612-PC 113..305 90..285 628 60.2 Plus
CG4612-PA 307 CG4612-PA 113..305 90..285 628 60.2 Plus
CG4612-PC 307 CG4612-PC 115..305 185..392 328 36.8 Plus
CG4612-PC 307 CG4612-PC 115..292 4..178 206 26.8 Plus