BDGP Sequence Production Resources |
Search the DGRC for LD24440
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 244 |
Well: | 40 |
Vector: | pOT2 |
Associated Gene/Transcript | Uch-L5-RA |
Protein status: | LD24440.pep: gold |
Preliminary Size: | 1160 |
Sequenced Size: | 1153 |
Gene | Date | Evidence |
---|---|---|
CG3431 | 2001-01-01 | Release 2 assignment |
CG3431 | 2002-12-11 | Blastp of sequenced clone |
Uch-L3 | 2008-04-29 | Release 5.5 accounting |
Uch-L3 | 2008-08-15 | Release 5.9 accounting |
Uch-L3 | 2008-12-18 | 5.12 accounting |
1153 bp (1153 high quality bases) assembled on 2002-12-11
GenBank Submission: AF132567
> LD24440.complete TTGGTTCACTCTGTGAGTTGACAGAAAATTTTGTGCAGTAAAAGCACCAT TTTTGTAGCGAAATCTATAGTAGAAAGATATTCAAGTGACTACTATTAAC ATGGGCGACGGTGCTGGAAATTGGTGTCTCATTGAATCCGATCCCGGGGT ATTCACAGAGCTTATTCGCGAATTCGGATGCGATGGGGCACAGGTGGAGG AGATCTGGAGTCTCGACAGCGAGTCCTTCAAGAACCTAGAGCCCATCCAT GGTCTGATCTTCCTGTTCAAGTGGGTGCAGGAGGATGAACCCGCTGGAAA AGTGGTCCTGGATCGGGAGAACATCTTCTTTGCCAAGCAGGTGATCAACA ACGCATGCGCCACCCAGGCGATCTTGAGCCTCCTGATGAACCTGGATCAT GAGGACATCAAATTGGGCGAGACCCTCACCAATTTTAAGGAGTTCTGCCA GTGCTTCGATCCGTACAACAAGGGATTAACTTTGAGCAACGCTAGCCAGA TTCGCACGGTGCACAACTCCTTTGCTCGCCCAACACTCTTCGAGCTGGAC ACTAAGAACCAGAAGAAGGACGATGACGTGTACCACTTTGTCGGCTATAT GCCCATCGGAGGAAGACTGTACGAGCTGGACGGCCTGAGGGAGGGACCCA TTGATCTTGGTGAGATCAAGTCGGAGCAGAACTGGATCGATGTGGTGCGT CCGATTATTGAGAAGCGCATGCAGCGCTACAGCGACGGCGAGATCCACTT CAATCTGATGGCTCTGATCTCGGACAGGCAGCGCATTTATGAACAGCAGA TTGAGAAGCTGCTTAATCCGGCGCCCAATGCTATGGACACTGAGGAGGAT CGACAGGCGGAGATCAGTAGCTTGCGCACGTACATAGAGTACGAGATTCA GAAAAAGAAGCGCTACAAAGTGGAGAATGTGCGGCGCAAGCACAACTATT TGCCCTTCATCGTGGAGCTCTTAAAAATTCTGGGCGAGAACGGACAACTA ATGCCCATCTACGAGAAGGCCAAGCAGAGGGCGCTAGAACGCGAGCAGGC GCAGCGCAAAAAGGATACCGACTAAGCATTTACAGTATATATTTAAAATT TCCCGTTGGACAATTTAAAATTGCTGCGATATTTGAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9467616..9468575 | 1135..176 | 4770 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 9468653..9468829 | 177..1 | 885 | 100 | Minus |
chrX | 22417052 | chrX | 11946845..11947038 | 774..581 | 280 | 76.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9475719..9476693 | 1150..176 | 4845 | 99.8 | Minus |
3L | 28110227 | 3L | 9476771..9476947 | 177..1 | 885 | 100 | Minus |
X | 23542271 | X | 12055801..12055994 | 774..581 | 295 | 76.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9468819..9469793 | 1150..176 | 4845 | 99.7 | Minus |
3L | 28103327 | 3L | 9469871..9470047 | 177..1 | 885 | 100 | Minus |
X | 23527363 | X | 12063899..12063996 | 774..677 | 265 | 84.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9467616..9468574 | 177..1135 | 99 | <- | Minus |
chr3L | 9468654..9468829 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-L3-RA | 1..975 | 101..1075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-L3-RA | 1..975 | 101..1075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-L5-RA | 1..975 | 101..1075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-L3-RA | 1..975 | 101..1075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-L5-RA | 1..975 | 101..1075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-L3-RA | 27..1161 | 1..1135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-L3-RA | 27..1161 | 1..1135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-L5-RA | 19..1153 | 1..1135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-L3-RA | 27..1161 | 1..1135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-L5-RA | 19..1153 | 1..1135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9475734..9476692 | 177..1135 | 100 | <- | Minus |
3L | 9476772..9476947 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9475734..9476692 | 177..1135 | 100 | <- | Minus |
3L | 9476772..9476947 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9475734..9476692 | 177..1135 | 100 | <- | Minus |
3L | 9476772..9476947 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9468834..9469792 | 177..1135 | 100 | <- | Minus |
arm_3L | 9469872..9470047 | 1..176 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9468834..9469792 | 177..1135 | 100 | <- | Minus |
3L | 9469872..9470047 | 1..176 | 100 | Minus |
Translation from 100 to 1074
> LD24440.pep MGDGAGNWCLIESDPGVFTELIREFGCDGAQVEEIWSLDSESFKNLEPIH GLIFLFKWVQEDEPAGKVVLDRENIFFAKQVINNACATQAILSLLMNLDH EDIKLGETLTNFKEFCQCFDPYNKGLTLSNASQIRTVHNSFARPTLFELD TKNQKKDDDVYHFVGYMPIGGRLYELDGLREGPIDLGEIKSEQNWIDVVR PIIEKRMQRYSDGEIHFNLMALISDRQRIYEQQIEKLLNPAPNAMDTEED RQAEISSLRTYIEYEIQKKKRYKVENVRRKHNYLPFIVELLKILGENGQL MPIYEKAKQRALEREQAQRKKDTD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24661-PA | 324 | GF24661-PA | 1..324 | 1..324 | 1643 | 93.8 | Plus |
Dana\GF19511-PA | 413 | GF19511-PA | 25..330 | 6..313 | 1182 | 69.6 | Plus |
Dana\GF12763-PA | 470 | GF12763-PA | 41..417 | 5..318 | 462 | 32.2 | Plus |
Dana\GF15299-PA | 227 | GF15299-PA | 2..224 | 6..224 | 169 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14033-PA | 324 | GG14033-PA | 1..324 | 1..324 | 1665 | 95.7 | Plus |
Dere\GG19562-PA | 335 | GG19562-PA | 16..323 | 6..316 | 1081 | 66 | Plus |
Dere\GG22294-PA | 471 | GG22294-PA | 39..419 | 1..318 | 461 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16209-PA | 324 | GH16209-PA | 1..324 | 1..324 | 1532 | 89.5 | Plus |
Dgri\GH22997-PA | 462 | GH22997-PA | 23..375 | 1..300 | 459 | 33.1 | Plus |
Dgri\GH11470-PA | 229 | GH11470-PA | 4..226 | 8..224 | 159 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uch-L5-PB | 324 | CG3431-PB | 1..324 | 1..324 | 1701 | 100 | Plus |
Uch-L5-PA | 324 | CG3431-PA | 1..324 | 1..324 | 1701 | 100 | Plus |
Uch-L5R-PA | 340 | CG1950-PA | 22..325 | 5..311 | 1048 | 63.8 | Plus |
calypso-PA | 471 | CG8445-PA | 39..393 | 1..300 | 444 | 31.9 | Plus |
calypso-PB | 471 | CG8445-PB | 39..393 | 1..300 | 444 | 31.9 | Plus |
Uch-PC | 224 | CG4265-PC | 4..224 | 8..227 | 183 | 26.8 | Plus |
Uch-PB | 227 | CG4265-PB | 4..227 | 8..227 | 182 | 26.4 | Plus |
Uch-PA | 227 | CG4265-PA | 4..227 | 8..227 | 182 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13355-PA | 324 | GI13355-PA | 1..324 | 1..324 | 1587 | 90.1 | Plus |
Dmoj\GI18963-PA | 461 | GI18963-PA | 23..399 | 1..318 | 468 | 32.5 | Plus |
Dmoj\GI16929-PA | 229 | GI16929-PA | 2..229 | 6..227 | 197 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17965-PA | 324 | GL17965-PA | 1..324 | 1..324 | 1615 | 91.7 | Plus |
Dper\GL20225-PA | 351 | GL20225-PA | 25..340 | 7..316 | 978 | 57.5 | Plus |
Dper\GL10684-PA | 475 | GL10684-PA | 38..418 | 1..318 | 454 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17448-PA | 324 | GA17448-PA | 1..324 | 1..324 | 1615 | 91.7 | Plus |
Dpse\GA26899-PA | 351 | GA26899-PA | 25..340 | 7..316 | 983 | 57.5 | Plus |
Dpse\GA21084-PA | 475 | GA21084-PA | 38..418 | 1..318 | 454 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24867-PA | 324 | GM24867-PA | 1..324 | 1..324 | 1707 | 98.5 | Plus |
Dsec\GM13220-PA | 340 | GM13220-PA | 21..325 | 4..311 | 1045 | 62.3 | Plus |
Dsec\GM20083-PA | 471 | GM20083-PA | 39..419 | 1..318 | 463 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12919-PA | 324 | GD12919-PA | 1..324 | 1..324 | 1716 | 98.8 | Plus |
Dsim\GD15942-PA | 426 | GD15942-PA | 105..411 | 2..311 | 1050 | 61.7 | Plus |
Dsim\GD25561-PA | 471 | GD25561-PA | 39..415 | 1..314 | 462 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13185-PA | 325 | GJ13185-PA | 1..325 | 1..324 | 1528 | 88 | Plus |
Dvir\GJ20906-PA | 462 | GJ20906-PA | 23..401 | 1..318 | 466 | 32.3 | Plus |
Dvir\GJ17211-PA | 229 | GJ17211-PA | 4..229 | 8..227 | 181 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20334-PA | 324 | GK20334-PA | 1..324 | 1..324 | 1577 | 89.5 | Plus |
Dwil\GK16481-PA | 376 | GK16481-PA | 27..345 | 5..312 | 1116 | 65.2 | Plus |
Dwil\GK22163-PA | 435 | GK22163-PA | 6..383 | 1..318 | 448 | 31.8 | Plus |
Dwil\GK15133-PA | 227 | GK15133-PA | 2..224 | 6..224 | 198 | 26.5 | Plus |
Dwil\GK22136-PA | 147 | GK22136-PA | 54..145 | 7..88 | 143 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21236-PA | 324 | GE21236-PA | 1..324 | 1..324 | 1670 | 96 | Plus |
Dyak\GE16722-PA | 329 | GE16722-PA | 16..329 | 6..322 | 1122 | 66.7 | Plus |
Dyak\GE14091-PA | 471 | GE14091-PA | 39..419 | 1..318 | 463 | 32 | Plus |
Dyak\GE15202-PA | 227 | GE15202-PA | 3..224 | 7..224 | 190 | 26.2 | Plus |
Translation from 100 to 1074
> LD24440.hyp MGDGAGNWCLIESDPGVFTELIREFGCDGAQVEEIWSLDSESFKNLEPIH GLIFLFKWVQEDEPAGKVVLDRENIFFAKQVINNACATQAILSLLMNLDH EDIKLGETLTNFKEFCQCFDPYNKGLTLSNASQIRTVHNSFARPTLFELD TKNQKKDDDVYHFVGYMPIGGRLYELDGLREGPIDLGEIKSEQNWIDVVR PIIEKRMQRYSDGEIHFNLMALISDRQRIYEQQIEKLLNPAPNAMDTEED RQAEISSLRTYIEYEIQKKKRYKVENVRRKHNYLPFIVELLKILGENGQL MPIYEKAKQRALEREQAQRKKDTD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uch-L5-PB | 324 | CG3431-PB | 1..324 | 1..324 | 1701 | 100 | Plus |
Uch-L5-PA | 324 | CG3431-PA | 1..324 | 1..324 | 1701 | 100 | Plus |
Uch-L5R-PA | 340 | CG1950-PA | 22..325 | 5..311 | 1048 | 63.8 | Plus |
calypso-PA | 471 | CG8445-PA | 39..393 | 1..300 | 444 | 31.9 | Plus |
calypso-PB | 471 | CG8445-PB | 39..393 | 1..300 | 444 | 31.9 | Plus |