BDGP Sequence Production Resources |
Search the DGRC for LD24495
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 244 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8258-RA |
Protein status: | LD24495.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1933 |
Gene | Date | Evidence |
---|---|---|
CG8258 | 2001-01-01 | Release 2 assignment |
CG8258 | 2001-09-19 | Blastp of sequenced clone |
CG8258 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8258 | 2008-04-29 | Release 5.5 accounting |
CG8258 | 2008-08-15 | Release 5.9 accounting |
CG8258 | 2008-12-18 | 5.12 accounting |
1933 bp (1933 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058545
> LD24495.complete CCACTTTGAGGTTATAACTATAGCTGGAATTTACCGACTGACTCCGTGTG AAATTGAAATCTGTGTTAAAAAATGGCTTTATCCGTTCCCAAGGCTCCCG GTGTGTCGCAGATGCTGAAGGATGGCGCCCGGATGTACAGTGGGCTGGAG GAGGCGGTGTTCCGCAACATCAGCGCCTGCAAGGAGTTTGCACAGACCAT GCGCTCTGCCTATGGGCCAAATGGCATGAACAAGATGATCATCAATCACA TCGAGAAGCAGTTCGTGACCAGCGATGCCGGCACCATCATGCGGGAGCTG GATGTTGAGCATCCAGCCGCCAAGTTGATCGTCATGGCCAGCCAGATGCA GGATGCCGAGGTGGGCGATGGTACAAACTTCGTGGTGGTGCTGGCCGGAG CTCTGTTGGAGTCCGCTGAGGAGCTGCTGCGTCTAGGAATCACCACTGCC GAGATCTCCGACGGCTATGAAAAGGCCTTGGAGAAGGCTCTGGAGATTCT GCCCAATCTGGTGAGCCACAAGATCGAGGACTATCGCAATGTGGAGAAGG TCAAGGAGGTACTCCGCACATCGATCATGTCGAAGCAGTACGGCCAGGAG GACTTCCTCAACGATTTGGTGAGCAAGGCCTGCGTCTCCATCTTGCCGGA TGAGGGCACCTTCAACGTGGACAACATTCGCATCTGTAAGATCTTGGGCA GCGGACTGACCAAGTCTGAGGTGGTTCGCGGCATGGTCTTCAAGCGCTTC GTAGAAGGCGATGTGACCTATGCAGAGAAGGCCAAGATCGTGATTTTCTC CTGCCCCGTCGATATTATCCAAACTGAGACCAAGGGCACAGTGCTGATCA AGTCGGCCGACGAGCTATTGAGCTTTTCCTCCGGCGAAGAGAGCCTGTTG GAGAGCCAGATCAAGGCTATCGCCGACGCAGGTGTCAAGGTGGTTGTGGC CGGCGGCAAGGTTGGCGACATGGCTCTGCACTTCCTTAACAAATACGGTC TGATGGCCGTGCGTCTCAACTCTAAGTTCGACCTGCGTCGCCTGAGCCGA TCCGTAAACGCCACTGTCCTGCCGCGCATCACCACGCCCAGTCAGGAGGA GTTGGGCTACTGCGACAAAGTTTGCATCGAGGAACTGGGAGACACCACAA TTGTGGCCTTCAGGAACGAGGGCAAGGACTCGCGCATTGCCACCGTGGTG ATCCGTGGAGCTACCGACAACTTCATGGATGACATTGAGCGTGCCCTGGA TGACGCTATTAACAACTTCAAGTGCCTGACCCGGGATGGCCGCTATCTGC CCGGAGCTGGCGCCACCGAGATCGAGTTGGCCACCCAGCTGTCCGCCTAT GCTGATACTCTGCCTGGTCTGGACCAGTACGCCGTGCGCAAGTTCGCTAA TGCGCTGGAAGTTTTCCCCAAGGCTCTGGCCGAGAACTCCGGCATCAATG GCACGGAAATCGTCAACCAGTTGTATTTGGCCCACAACAACGAGGCCGGA AAGACAATCGGCTTCGACATTGAGGCCGAGAAGGCCAGCACCATCGACAC AACGAAGGCAAAGCTCTTCGATCTGTACCAGTCCAAGTTCTGGGGTCTCA AGTACGCTGTTGGCGCGGCCGCAACCATCTTGAAGGTGGACCAGATCATC ATGGCCAAGCGCGCCGGAGGTCCCAAGGTGCGACAGGCTGCCGGCAGCGA TGACGAGAGTTAAGCGGCTCCTCTGTGATTCGTACTCCCTACTATAACTA GTTTCTCCCGCTCCCACAAAGAGTGCATTGTATTTTCATAAACGAGTCCC ATGGAAATTATAAATTTCATTAACCACTCTCACACTCACCCACATACACA GCCATGCACACAGTTTCTTGTATTAATAAACTTAACTTACGAAAACTGAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8258-RA | 2066 | CG8258-RA | 124..2023 | 1..1900 | 9500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4793193..4794225 | 1164..132 | 5165 | 100 | Minus |
chr2R | 21145070 | chr2R | 4792395..4793132 | 1898..1161 | 3690 | 100 | Minus |
chr2R | 21145070 | chr2R | 4794404..4794535 | 132..1 | 660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8905642..8906674 | 1164..132 | 5165 | 100 | Minus |
2R | 25286936 | 2R | 8904842..8905581 | 1900..1161 | 3700 | 100 | Minus |
2R | 25286936 | 2R | 8906853..8906984 | 132..1 | 660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8906841..8907873 | 1164..132 | 5165 | 100 | Minus |
2R | 25260384 | 2R | 8906041..8906780 | 1900..1161 | 3700 | 100 | Minus |
2R | 25260384 | 2R | 8908052..8908183 | 132..1 | 660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 2254..2300 | 582..630 | 113 | 75.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4794404..4794535 | 1..132 | 100 | Minus | |
chr2R | 4792395..4793129 | 1164..1898 | 100 | <- | Minus |
chr2R | 4793194..4794224 | 133..1163 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8258-RA | 1..1641 | 73..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8258-RA | 1..1641 | 73..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8258-RA | 1..1641 | 73..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8258-RA | 1..1641 | 73..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8258-RA | 1..1641 | 73..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8258-RA | 18..1915 | 1..1898 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8258-RA | 18..1915 | 1..1898 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8258-RA | 7..1904 | 1..1898 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8258-RA | 18..1915 | 1..1898 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8258-RA | 7..1904 | 1..1898 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8904844..8905578 | 1164..1898 | 100 | <- | Minus |
2R | 8905643..8906673 | 133..1163 | 100 | <- | Minus |
2R | 8906853..8906984 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8904844..8905578 | 1164..1898 | 100 | <- | Minus |
2R | 8905643..8906673 | 133..1163 | 100 | <- | Minus |
2R | 8906853..8906984 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8904844..8905578 | 1164..1898 | 100 | <- | Minus |
2R | 8905643..8906673 | 133..1163 | 100 | <- | Minus |
2R | 8906853..8906984 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4794358..4794489 | 1..132 | 100 | Minus | |
arm_2R | 4792349..4793083 | 1164..1898 | 100 | <- | Minus |
arm_2R | 4793148..4794178 | 133..1163 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8906043..8906777 | 1164..1898 | 100 | <- | Minus |
2R | 8906842..8907872 | 133..1163 | 100 | <- | Minus |
2R | 8908052..8908183 | 1..132 | 100 | Minus |
Translation from 72 to 1712
> LD24495.hyp MALSVPKAPGVSQMLKDGARMYSGLEEAVFRNISACKEFAQTMRSAYGPN GMNKMIINHIEKQFVTSDAGTIMRELDVEHPAAKLIVMASQMQDAEVGDG TNFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPNLVSHK IEDYRNVEKVKEVLRTSIMSKQYGQEDFLNDLVSKACVSILPDEGTFNVD NIRICKILGSGLTKSEVVRGMVFKRFVEGDVTYAEKAKIVIFSCPVDIIQ TETKGTVLIKSADELLSFSSGEESLLESQIKAIADAGVKVVVAGGKVGDM ALHFLNKYGLMAVRLNSKFDLRRLSRSVNATVLPRITTPSQEELGYCDKV CIEELGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERALDDAINNFK CLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPK ALAENSGINGTEIVNQLYLAHNNEAGKTIGFDIEAEKASTIDTTKAKLFD LYQSKFWGLKYAVGAAATILKVDQIIMAKRAGGPKVRQAAGSDDES*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8258-PA | 546 | CG8258-PA | 1..546 | 1..546 | 2729 | 100 | Plus |
T-cp1-PA | 557 | CG5374-PA | 23..534 | 31..526 | 551 | 28.8 | Plus |
T-cp1-PB | 557 | CG5374-PB | 23..534 | 31..526 | 551 | 28.8 | Plus |
CG5525-PA | 533 | CG5525-PA | 3..529 | 6..526 | 545 | 29.5 | Plus |
Tcp-1eta-PA | 544 | CG8351-PA | 7..527 | 14..534 | 541 | 27.4 | Plus |
Translation from 72 to 1712
> LD24495.pep MALSVPKAPGVSQMLKDGARMYSGLEEAVFRNISACKEFAQTMRSAYGPN GMNKMIINHIEKQFVTSDAGTIMRELDVEHPAAKLIVMASQMQDAEVGDG TNFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPNLVSHK IEDYRNVEKVKEVLRTSIMSKQYGQEDFLNDLVSKACVSILPDEGTFNVD NIRICKILGSGLTKSEVVRGMVFKRFVEGDVTYAEKAKIVIFSCPVDIIQ TETKGTVLIKSADELLSFSSGEESLLESQIKAIADAGVKVVVAGGKVGDM ALHFLNKYGLMAVRLNSKFDLRRLSRSVNATVLPRITTPSQEELGYCDKV CIEELGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERALDDAINNFK CLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPK ALAENSGINGTEIVNQLYLAHNNEAGKTIGFDIEAEKASTIDTTKAKLFD LYQSKFWGLKYAVGAAATILKVDQIIMAKRAGGPKVRQAAGSDDES*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12562-PA | 546 | GF12562-PA | 1..546 | 1..546 | 2720 | 96 | Plus |
Dana\GF15661-PA | 533 | GF15661-PA | 3..529 | 6..526 | 550 | 31.1 | Plus |
Dana\GF12298-PA | 542 | GF12298-PA | 33..541 | 27..533 | 518 | 29.6 | Plus |
Dana\GF16152-PA | 557 | GF16152-PA | 23..534 | 31..526 | 513 | 28.7 | Plus |
Dana\GF18192-PA | 545 | GF18192-PA | 7..525 | 14..532 | 503 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10613-PA | 546 | GG10613-PA | 1..546 | 1..546 | 2847 | 98.2 | Plus |
Dere\GG10247-PA | 533 | GG10247-PA | 3..529 | 6..526 | 534 | 30.5 | Plus |
Dere\GG12510-PA | 557 | GG12510-PA | 23..534 | 31..526 | 523 | 29.1 | Plus |
Dere\GG20252-PA | 542 | GG20252-PA | 33..541 | 27..533 | 518 | 29.6 | Plus |
Dere\GG13138-PA | 544 | GG13138-PA | 7..525 | 14..532 | 505 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22689-PA | 546 | GH22689-PA | 1..546 | 1..546 | 2624 | 91.6 | Plus |
Dgri\GH19719-PA | 541 | GH19719-PA | 33..534 | 27..525 | 529 | 29.8 | Plus |
Dgri\GH18443-PA | 557 | GH18443-PA | 23..534 | 31..526 | 519 | 28.9 | Plus |
Dgri\GH11666-PA | 533 | GH11666-PA | 12..529 | 6..526 | 514 | 29.9 | Plus |
Dgri\GH18159-PA | 544 | GH18159-PA | 25..538 | 30..540 | 478 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CCT8-PA | 546 | CG8258-PA | 1..546 | 1..546 | 2729 | 100 | Plus |
CCT1-PA | 557 | CG5374-PA | 23..534 | 31..526 | 551 | 28.8 | Plus |
CCT1-PB | 557 | CG5374-PB | 23..534 | 31..526 | 551 | 28.8 | Plus |
CCT4-PA | 533 | CG5525-PA | 3..529 | 6..526 | 545 | 29.5 | Plus |
CCT7-PA | 544 | CG8351-PA | 7..527 | 14..534 | 541 | 27.4 | Plus |
CCT5-PA | 542 | CG8439-PA | 33..541 | 27..533 | 535 | 29.4 | Plus |
CCT5-PB | 512 | CG8439-PB | 8..511 | 32..533 | 530 | 29.5 | Plus |
CCT3-PD | 544 | CG8977-PD | 10..538 | 14..540 | 483 | 27.5 | Plus |
CCT3-PC | 544 | CG8977-PC | 10..538 | 14..540 | 483 | 27.5 | Plus |
CCT3-PB | 544 | CG8977-PB | 10..538 | 14..540 | 483 | 27.5 | Plus |
CCT3-PA | 544 | CG8977-PA | 10..538 | 14..540 | 483 | 27.5 | Plus |
CCT6-PA | 533 | CG8231-PA | 18..526 | 27..528 | 473 | 28 | Plus |
CCT2-PA | 535 | CG7033-PA | 38..521 | 43..526 | 455 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20616-PA | 546 | GI20616-PA | 1..546 | 1..546 | 2643 | 92.5 | Plus |
Dmoj\GI17110-PA | 533 | GI17110-PA | 11..529 | 9..526 | 571 | 31.4 | Plus |
Dmoj\GI11150-PA | 557 | GI11150-PA | 23..534 | 31..526 | 549 | 30 | Plus |
Dmoj\GI23651-PA | 544 | GI23651-PA | 7..525 | 14..532 | 524 | 28.7 | Plus |
Dmoj\GI10788-PA | 557 | GI10788-PA | 23..534 | 31..526 | 522 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10409-PA | 546 | GL10409-PA | 1..546 | 1..546 | 2745 | 94.3 | Plus |
Dper\GL19739-PA | 533 | GL19739-PA | 3..529 | 6..526 | 536 | 29.9 | Plus |
Dper\GL23334-PA | 557 | GL23334-PA | 23..534 | 31..526 | 519 | 28.8 | Plus |
Dper\GL11023-PA | 542 | GL11023-PA | 33..534 | 27..525 | 516 | 29.6 | Plus |
Dper\GL12486-PA | 540 | GL12486-PA | 6..524 | 14..532 | 488 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20937-PA | 546 | GA20937-PA | 1..546 | 1..546 | 2738 | 94 | Plus |
Dpse\GA18950-PA | 533 | GA18950-PA | 3..529 | 6..526 | 536 | 29.9 | Plus |
Dpse\GA18830-PA | 557 | GA18830-PA | 23..534 | 31..526 | 519 | 28.8 | Plus |
Dpse\GA21078-PA | 542 | GA21078-PA | 33..534 | 27..525 | 516 | 29.6 | Plus |
Dpse\GA21448-PA | 544 | GA21448-PA | 25..538 | 30..540 | 496 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20657-PA | 546 | GM20657-PA | 1..546 | 1..546 | 2860 | 98.9 | Plus |
Dsec\GM26064-PA | 533 | GM26064-PA | 3..529 | 6..526 | 535 | 30.5 | Plus |
Dsec\GM21339-PA | 542 | GM21339-PA | 33..541 | 27..533 | 525 | 29.8 | Plus |
Dsec\GM23644-PA | 557 | GM23644-PA | 23..534 | 31..526 | 520 | 28.9 | Plus |
Dsec\GM15181-PA | 544 | GM15181-PA | 25..538 | 30..540 | 482 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10130-PA | 546 | GD10130-PA | 1..546 | 1..546 | 2860 | 98.9 | Plus |
Dsim\T-cp1-PA | 557 | GD18453-PA | 23..534 | 31..526 | 520 | 28.9 | Plus |
Dsim\GD19118-PA | 544 | GD19118-PA | 25..538 | 30..540 | 482 | 28.2 | Plus |
Dsim\GD22106-PA | 516 | GD22106-PA | 3..512 | 6..526 | 451 | 28.3 | Plus |
Dsim\GD18576-PA | 436 | GD18576-PA | 7..421 | 14..471 | 407 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21056-PA | 546 | GJ21056-PA | 1..546 | 1..546 | 2612 | 91.4 | Plus |
Dvir\GJ16148-PA | 533 | GJ16148-PA | 28..529 | 30..526 | 559 | 31.5 | Plus |
Dvir\GJ19908-PA | 541 | GJ19908-PA | 33..534 | 27..525 | 520 | 29.6 | Plus |
Dvir\GJ14386-PA | 557 | GJ14386-PA | 23..534 | 31..526 | 517 | 29.1 | Plus |
Dvir\GJ23495-PA | 545 | GJ23495-PA | 7..525 | 14..532 | 508 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21949-PA | 546 | GK21949-PA | 1..546 | 1..546 | 2687 | 93.8 | Plus |
Dwil\GK14617-PA | 533 | GK14617-PA | 3..529 | 6..526 | 549 | 30.8 | Plus |
Dwil\GK14439-PA | 557 | GK14439-PA | 23..534 | 31..526 | 518 | 28.9 | Plus |
Dwil\GK11257-PA | 544 | GK11257-PA | 7..525 | 14..532 | 508 | 28.4 | Plus |
Dwil\GK23011-PA | 542 | GK23011-PA | 33..541 | 27..533 | 508 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22743-PA | 546 | GE22743-PA | 1..546 | 1..546 | 2853 | 98.5 | Plus |
Dyak\GE12130-PA | 533 | GE12130-PA | 3..529 | 6..526 | 536 | 30.5 | Plus |
Dyak\GE24032-PA | 557 | GE24032-PA | 23..534 | 31..526 | 522 | 29.1 | Plus |
Dyak\GE12411-PA | 542 | GE12411-PA | 33..541 | 27..533 | 520 | 29.6 | Plus |
Dyak\GE24588-PA | 544 | GE24588-PA | 25..538 | 30..540 | 481 | 28.2 | Plus |