BDGP Sequence Production Resources |
Search the DGRC for LD24529
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 245 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | Taf6-RA |
Protein status: | LD24529.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2075 |
Gene | Date | Evidence |
---|---|---|
CG9348 | 2001-01-01 | Release 2 assignment |
CG32211 | 2001-07-04 | Blastp of sequenced clone |
CG32211 | 2003-01-01 | Sim4 clustering to Release 3 |
Taf6 | 2008-04-29 | Release 5.5 accounting |
Taf6 | 2008-08-15 | Release 5.9 accounting |
Taf6 | 2008-12-18 | 5.12 accounting |
2075 bp (2075 high quality bases) assembled on 2005-08-22
GenBank Submission: AY051702
> LD24529.complete TCTCTTTTGGGTGTGTGCACACTGGCCGAGCAGCTCGGCGATTATTATTT GTTTATTTGTAAAAACCTGGGAAATGAGTGGAAAACCGTCGAAACCGAGC AGCCCCTCCAGCAGCATGCTGTACGGCTCCAGCATCTCGGCGGAGTCCAT GAAGGTGATCGCGGAGAGCATCGGAGTGGGCTCCCTGTCGGATGACGCCG CCAAGGAACTAGCGGAGGATGTGTCCATCAAGCTGAAGAGGATTGTACAG GATGCGGCCAAGTTCATGAACCACGCCAAGCGGCAGAAGCTCTCAGTGCG GGACATCGACATGTCCCTTAAGGTGCGAAATGTGGAGCCGCAGTACGGTT TCGTAGCCAAGGACTTCATTCCATTCCGCTTCGCATCTGGCGGAGGACGG GAGCTGCACTTCACCGAGGACAAGGAAATCGACCTAGGAGAAATCACATC CACCAACTCTGTAAAAATTCCCCTGGATCTCACCCTGCGCTCCCATTGGT TTGTTGTGGAGGGAGTGCAACCCACTGTGCCCGAAAACCCCCCTCCGCTC TCGAAGGATTCCCAGTTACTGGACTCGGTCAATCCAGTTATTAAGATGGA TCAAGGCCTAAACAAAGATGCGGCAGGCAAACCCACCACCGGCAAGATAC ACAAGCTGAAAAACGTGGAGACCATTCATGTCAAGCAACTGGCCACGCAC GAGTTGTCCGTGGAGCAGCAGTTGTACTACAAGGAGATCACCGAGGCGTG CGTGGGATCTGATGAGCCGCGGCGCGGGGAAGCGCTGCAGTCGCTGGGAT CCGATCCTGGCCTGCACGAAATGCTTCCCCGCATGTGCACCTTCATTGCC GAGGGAGTTAAGGTCAATGTGGTTCAGAACAACTTGGCGTTGCTTATTTA CCTCATGCGCATGGTTCGTGCGCTTCTGGATAATCCTTCGCTGTTTCTGG AGAAATACCTCCACGAACTGATACCCTCGGTGATGACGTGCATTGTGTCC AAACAGCTGTGTATGCGCCCCGAGCTGGACAATCACTGGGCCCTGCGAGA CTTTGCCTCCCGACTGATGGCTCAAATCTGCAAGAACTTCAATACCCTAA CCAACAATCTGCAAACCCGTGTCACCCGCATCTTCAGCAAGGCCCTGCAG AACGACAAGACCCACCTGTCCTCGCTTTACGGCTCTATTGCGGGTCTCTC GGAGCTGGGGGGCGAAGTCATAAAGGTTTTCATCATACCCCGCCTTAAGT TCATATCGGAGCGCATTGAACCTCACCTGCTCGGCACCTCCATCAGCAAC ACTGACAAGACAGCAGCAGGTCACATCCGCGCCATGCTTCAGAAGTGCTG TCCCCCGATTCTCAGGCAAATGCGCTCAGCGCCAGATACAGCGGAGGACT ACAAGAACGACTTTGGCTTCCTGGGGCCGTCGCTGTGCCAGGCAGTAGTC AAAGTTCGAAATGCGCCCGCCTCAAGCATTGTAACCCTGTCATCCAACAC TATCAACACGGCACCCATCACGAGTGCAGCACAAACAGCAACAACCATCG GACGAGTGTCCATGCCCACCACACAGAGACAGGGAAGTCCCGGAGTCTCG TCCCTGCCGCAAATAAGAGCCATTCAGGCCAACCAGCCGGCGCAAAAGTT TGTGATAGTCACCCAGAACTCGCCGCAGCAGGGCCAGGCGAAGGTGGTGC GGCGTGGCAGCTCTCCGCACAGCGTGGTCCTCTCCGCGGCCTCCAACGCT GCCAGTGCCTCCAATTCGAACTCAAGCTCGAGCGGCAGTCTACTAGCGGC TGCACAGCGGAGCAGCGATAATGTGTGTGTTATTGCCGGTAGCGAAGCGC CAGCAGTTGATGGTATAACAGTTCAATCTTTCAGAGCATCCTAGACGCCA ACTCGCTGATCATTGAGACGGAGATTGTGCGCGCACCGCCCGAGCTGGAC GATCTCTCGCACCTGGAGTAGCCAGCTTAGTTCGTAGTCCACATTTTGTC ATATTGTATGCAATAAAATAAAAAATGCGGGTTCCTACCCCAAAAAAATG TAACCACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Taf6-RA | 2158 | Taf6-RA | 25..2086 | 1..2062 | 10295 | 99.9 | Plus |
Taf6.d | 2056 | Taf6.d | 1..2055 | 1..2058 | 10220 | 99.8 | Plus |
Taf6.a | 2010 | Taf6.a | 1..1822 | 1..1822 | 9110 | 100 | Plus |
Taf6.a | 2010 | Taf6.a | 1823..2009 | 1872..2058 | 935 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19588468..19589425 | 1..958 | 4790 | 100 | Plus |
chr3L | 24539361 | chr3L | 19590290..19590763 | 1584..2057 | 2355 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 19589714..19590170 | 1128..1584 | 2285 | 100 | Plus |
chr3L | 24539361 | chr3L | 19589484..19589657 | 955..1128 | 855 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19599087..19600044 | 1..958 | 4790 | 100 | Plus |
3L | 28110227 | 3L | 19600909..19601387 | 1584..2062 | 2380 | 99.8 | Plus |
3L | 28110227 | 3L | 19600333..19600789 | 1128..1584 | 2285 | 100 | Plus |
3L | 28110227 | 3L | 19600103..19600276 | 955..1128 | 855 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19592187..19593144 | 1..958 | 4790 | 100 | Plus |
3L | 28103327 | 3L | 19594009..19594487 | 1584..2062 | 2380 | 99.7 | Plus |
3L | 28103327 | 3L | 19593433..19593889 | 1128..1584 | 2285 | 100 | Plus |
3L | 28103327 | 3L | 19593203..19593376 | 955..1128 | 855 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rover | 7318 | rover ROVER 7318bp | 1457..1499 | 231..189 | 116 | 74.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19588468..19589425 | 1..958 | 100 | -> | Plus |
chr3L | 19589488..19589657 | 959..1128 | 100 | -> | Plus |
chr3L | 19589715..19590170 | 1129..1584 | 100 | -> | Plus |
chr3L | 19590291..19590763 | 1585..2057 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf6-RA | 1..1821 | 74..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf6-RA | 1..1821 | 74..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf6-RA | 1..1821 | 74..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf6-RA | 1..1821 | 74..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf6-RA | 1..1821 | 74..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf6-RA | 1..2057 | 1..2057 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf6-RA | 1..2057 | 1..2057 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf6-RA | 1..2056 | 2..2057 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf6-RA | 1..2057 | 1..2057 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taf6-RA | 1..2056 | 2..2057 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19599087..19600044 | 1..958 | 100 | -> | Plus |
3L | 19600107..19600276 | 959..1128 | 100 | -> | Plus |
3L | 19600334..19600789 | 1129..1584 | 100 | -> | Plus |
3L | 19600910..19601382 | 1585..2057 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19599087..19600044 | 1..958 | 100 | -> | Plus |
3L | 19600107..19600276 | 959..1128 | 100 | -> | Plus |
3L | 19600334..19600789 | 1129..1584 | 100 | -> | Plus |
3L | 19600910..19601382 | 1585..2057 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19599087..19600044 | 1..958 | 100 | -> | Plus |
3L | 19600107..19600276 | 959..1128 | 100 | -> | Plus |
3L | 19600334..19600789 | 1129..1584 | 100 | -> | Plus |
3L | 19600910..19601382 | 1585..2057 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19592187..19593144 | 1..958 | 100 | -> | Plus |
arm_3L | 19593207..19593376 | 959..1128 | 100 | -> | Plus |
arm_3L | 19593434..19593889 | 1129..1584 | 100 | -> | Plus |
arm_3L | 19594010..19594482 | 1585..2057 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19592187..19593144 | 1..958 | 100 | -> | Plus |
3L | 19593207..19593376 | 959..1128 | 100 | -> | Plus |
3L | 19593434..19593889 | 1129..1584 | 100 | -> | Plus |
3L | 19594010..19594482 | 1585..2057 | 100 | Plus |
Translation from 0 to 1893
> LD24529.hyp LFWVCAHWPSSSAIIICLFVKTWEMSGKPSKPSSPSSSMLYGSSISAESM KVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVR DIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITS TNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMD QGLNKDAAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEAC VGSDEPRRGEALQSLGSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIY LMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPELDNHWALRD FASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLS ELGGEVIKVFIIPRLKFISERIEPHLLGTSISNTDKTAAGHIRAMLQKCC PPILRQMRSAPDTAEDYKNDFGFLGPSLCQAVVKVRNAPASSIVTLSSNT INTAPITSAAQTATTIGRVSMPTTQRQGSPGVSSLPQIRAIQANQPAQKF VIVTQNSPQQGQAKVVRRGSSPHSVVLSAASNAASASNSNSSSSGSLLAA AQRSSDNVCVIAGSEAPAVDGITVQSFRAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Taf6-PA | 606 | CG32211-PA | 1..606 | 25..630 | 3047 | 100 | Plus |
Taf6-PB | 605 | CG32211-PB | 1..605 | 25..630 | 3031 | 99.8 | Plus |
mia-PC | 589 | CG10390-PC | 169..555 | 222..594 | 566 | 34.7 | Plus |
mia-PB | 589 | CG10390-PB | 169..555 | 222..594 | 566 | 34.7 | Plus |
mia-PA | 589 | CG10390-PA | 169..555 | 222..594 | 566 | 34.7 | Plus |
Translation from 73 to 1893
> LD24529.pep MSGKPSKPSSPSSSMLYGSSISAESMKVIAESIGVGSLSDDAAKELAEDV SIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIP FRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLDLTLRSHWFVVEGVQP TVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNVET IHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLGSDPGLHEM LPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELI PSVMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRV TRIFSKALQNDKTHLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEP HLLGTSISNTDKTAAGHIRAMLQKCCPPILRQMRSAPDTAEDYKNDFGFL GPSLCQAVVKVRNAPASSIVTLSSNTINTAPITSAAQTATTIGRVSMPTT QRQGSPGVSSLPQIRAIQANQPAQKFVIVTQNSPQQGQAKVVRRGSSPHS VVLSAASNAASASNSNSSSSGSLLAAAQRSSDNVCVIAGSEAPAVDGITV QSFRAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23708-PA | 619 | GF23708-PA | 1..598 | 1..590 | 2832 | 91.1 | Plus |
Dana\GF16042-PA | 539 | GF16042-PA | 151..413 | 199..462 | 572 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16046-PA | 611 | GG16046-PA | 1..590 | 1..590 | 3045 | 96.8 | Plus |
Dere\GG10968-PA | 570 | GG10968-PA | 12..413 | 20..462 | 572 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16937-PA | 613 | GH16937-PA | 15..588 | 15..586 | 2688 | 89.6 | Plus |
Dgri\GH17238-PA | 735 | GH17238-PA | 433..703 | 195..462 | 429 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Taf6-PA | 606 | CG32211-PA | 1..606 | 1..606 | 3047 | 100 | Plus |
Taf6-PB | 605 | CG32211-PB | 1..605 | 1..606 | 3031 | 99.8 | Plus |
mia-PC | 589 | CG10390-PC | 169..555 | 198..570 | 566 | 34.7 | Plus |
mia-PB | 589 | CG10390-PB | 169..555 | 198..570 | 566 | 34.7 | Plus |
mia-PA | 589 | CG10390-PA | 169..555 | 198..570 | 566 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11798-PA | 637 | GI11798-PA | 1..553 | 1..553 | 2775 | 92.4 | Plus |
Dmoj\GI24488-PA | 440 | GI24488-PA | 170..415 | 211..458 | 511 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20945-PA | 555 | GL20945-PA | 1..520 | 1..521 | 2551 | 90.2 | Plus |
Dper\GL16368-PA | 501 | GL16368-PA | 95..237 | 211..352 | 227 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16761-PA | 620 | GA16761-PA | 1..561 | 1..560 | 2664 | 89.1 | Plus |
Dpse\GA22349-PA | 580 | GA22349-PA | 95..343 | 211..462 | 332 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19603-PA | 611 | GM19603-PA | 1..590 | 1..590 | 3068 | 97.5 | Plus |
Dsec\GM10624-PA | 588 | GM10624-PA | 48..434 | 38..462 | 549 | 31.5 | Plus |
Dsec\GM23247-PA | 197 | GM23247-PA | 1..88 | 378..462 | 148 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14815-PA | 611 | GD14815-PA | 1..590 | 1..590 | 3071 | 97.6 | Plus |
Dsim\GD19609-PA | 570 | GD19609-PA | 2..416 | 5..462 | 565 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13501-PA | 616 | GJ13501-PA | 15..553 | 15..553 | 2769 | 94.4 | Plus |
Dvir\GJ24553-PA | 397 | GJ24553-PA | 124..374 | 211..462 | 596 | 47 | Plus |