BDGP Sequence Production Resources |
Search the DGRC for LD24607
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 246 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | Spec2-RA |
Protein status: | LD24607.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1716 |
Gene | Date | Evidence |
---|---|---|
CG2911 | 2001-01-01 | Release 2 assignment |
CG14672 | 2001-01-01 | Release 2 assignment |
CG14672 | 2001-07-04 | Blastp of sequenced clone |
Spec2 | 2008-04-29 | Release 5.5 accounting |
Spec2 | 2008-08-15 | Release 5.9 accounting |
CG2911 | 2008-08-15 | Release 5.9 accounting |
Spec2 | 2008-12-18 | 5.12 accounting |
CG2911 | 2008-12-18 | 5.12 accounting |
1716 bp (1716 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060373
> LD24607.complete CTAAACGCGCTTTTTAAACGAAAGAGAGGCAGTAGATAGAAGACGCGAGT TAAGTGCTGACGGAATACAGCTTCACATGACGACATTTGCTATTTGCGGG CGAGTGCAAGGCGTGTGCTTCGGCGTTCGAAAAAAGTGCTGAGAGGAAGA GACTGAAAAAGTTCTGAAAGCGAGTGGGTCGTGCCTACCGCTCCCACCCT GCCACCCCCACAAAACAACGGTGTTCTCACTTAATAAACAAATCGACGGA GCAACAAGAGATTTCCACACGTGATCTGGGAGCAGGAAAGCCGTCTCACC TTATAAGGAGCCGAGGTGCATAGCCCACGCTACACAACTCTACGTGCACA GCCAACCTGTCGGGGAGCAGCTGCCTCACGATTGATCGCCCGCAATACCA GAAGACTGAGTCCCCGTCCAGCGCCAGCCAGCGAGCCAGGAGCAAGGGGA AGATGGCCAGCACCGGCGAGATCTGGCTGCAGTGGTTTTCGTGCTGCTTC CAGCAGCAGCGCTCGCCCTCCCGCCGCCCACACCAACGCCTGCGCATCGA CCGGTCCATGATCGGCAATCCCACCAACTTCGTCCACACGGGCCACATCG GATCCGCGGACGTGGAGCTGTCGGCCAACCGCCTCAACGCGATCTCCACC CAGATGCAGAGCAAAGGCGGCTACGAGACCAACTCGATACACTCGCTACA TGCCTGCTGATGGAAGCCCCCATCACCTGGCAACATCCCCGCTATCAAGT GCATTTCGTGCAATTTTCCACAGAGGAGGATGACGGCAAAGGAGAGGAGC AGCAGACATACCTTTTACGATTCGTGCTATCGGGCGAGGAGGAGGACCAA AATGGGTGGGAGGCCTGAGCGGCGCACAAAGCTGGAAGTCACGAGGAGGT GCTTAGATTAGGTTCCACATAAGAAAAAACCAGACTGCGCGACAACGGAA TGCATTCCGGCTTTTAACCGCGGACCTACTTGATTTTGGGTGATTTGCCT TTTGTGAGTATTAGCTAAATGAAAAATCGCAAAAGAGTGCCAAGCGACAA AATCAACCGACAATTAAGCCAGTTTCAGGCATATATATGTATGTAAACAC AGAGTCAGTTTGAGGATTAGGTAGCATTATTAGATCTAATTAATGAGGAA AGAAGGAAATCGAAAATCGAACTACCCGTTCAGTTCCTATCCATGATAAG TACCATTTCCAAAACCCCATTTTCGAGATCGTTTTTAGAGCTTTTACGAA AACTGCCTTATAATCACAACCAGTCTGACCTGACCTGATCCATGGTATTT GGCTGAAACAGTGGAACTAGCGAATCATAATTTACAAAAGCTAATATAGC ACTTACACAGCGTTTATACACAGCACAGTGACGCACAATCATTTTCAACA CACAAAGTAATCGGTTTTAGATCGTTTTTGATATAAATCTCATATGCGAG TACTGAGGAGATTCTACGCACGTCAGGATTCGAGGATTATGTTGTTTCTG GGCCAGCGACAATGCACCTAAGATGGACTATGGAGTACCTTTGTAGAACC CTGATTTAAGAAACAAAAATATATAGTTGTGAAATCGAATGCCGTTGTAG ATAACCGAGGTGAGGAGTTTAGAATGCGTTGGGTTTTAAGCATATAGACT AATTTATTTAAGCAATAATTTATGGAAATATATATATATTTAAAATCAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Spec2-RA | 1747 | Spec2-RA | 42..1741 | 1..1699 | 8445 | 99.8 | Plus |
nc_14812.a | 1312 | nc_14812.a | 307..1304 | 702..1699 | 4990 | 100 | Plus |
nc_14812.a | 1312 | nc_14812.a | 1..307 | 2..308 | 1535 | 100 | Plus |
CG2911-RB | 891 | CG2911-RB | 8..314 | 1..307 | 1535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1442313..1443312 | 1697..698 | 4985 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 1444137..1444533 | 702..306 | 1985 | 100 | Minus |
chr3R | 27901430 | chr3R | 1449432..1449739 | 308..1 | 1540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5616652..5617653 | 1699..698 | 4995 | 99.9 | Minus |
3R | 32079331 | 3R | 5618478..5618874 | 702..306 | 1985 | 100 | Minus |
3R | 32079331 | 3R | 5623774..5624081 | 308..1 | 1540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5357483..5358484 | 1699..698 | 4995 | 99.9 | Minus |
3R | 31820162 | 3R | 5359309..5359705 | 702..306 | 1985 | 100 | Minus |
3R | 31820162 | 3R | 5364605..5364912 | 308..1 | 1540 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1442339..1443308 | 702..1671 | 100 | <- | Minus |
chr3R | 1444138..1444528 | 311..701 | 100 | <- | Minus |
chr3R | 1449429..1449739 | 1..310 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spec2-RA | 1..258 | 453..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spec2-RA | 1..258 | 453..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spec2-RA | 1..258 | 453..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spec2-RA | 1..258 | 453..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spec2-RA | 1..258 | 453..710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spec2-RA | 42..1739 | 1..1697 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spec2-RA | 42..1739 | 1..1697 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spec2-RA | 45..1738 | 1..1697 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spec2-RA | 42..1739 | 1..1697 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spec2-RA | 45..1738 | 1..1697 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5616654..5617649 | 702..1697 | 100 | <- | Minus |
3R | 5618479..5618869 | 311..701 | 100 | <- | Minus |
3R | 5623771..5624081 | 1..310 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5616654..5617649 | 702..1697 | 100 | <- | Minus |
3R | 5618479..5618869 | 311..701 | 100 | <- | Minus |
3R | 5623771..5624081 | 1..310 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5616654..5617649 | 702..1697 | 100 | <- | Minus |
3R | 5618479..5618869 | 311..701 | 100 | <- | Minus |
3R | 5623771..5624081 | 1..310 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1442376..1443371 | 702..1697 | 100 | <- | Minus |
arm_3R | 1444201..1444591 | 311..701 | 100 | <- | Minus |
arm_3R | 1449493..1449803 | 1..310 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5357485..5358480 | 702..1697 | 100 | <- | Minus |
3R | 5359310..5359700 | 311..701 | 100 | <- | Minus |
3R | 5364602..5364912 | 1..310 | 99 | Minus |
Translation from 452 to 709
> LD24607.pep MASTGEIWLQWFSCCFQQQRSPSRRPHQRLRIDRSMIGNPTNFVHTGHIG SADVELSANRLNAISTQMQSKGGYETNSIHSLHAC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18659-PA | 172 | GF18659-PA | 88..172 | 1..85 | 446 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10922-PA | 85 | GG10922-PA | 1..84 | 1..84 | 445 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17530-PA | 88 | GH17530-PA | 1..88 | 1..85 | 429 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Spec2-PA | 85 | CG14672-PA | 1..85 | 1..85 | 459 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22523-PA | 85 | GI22523-PA | 1..85 | 1..85 | 456 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23024-PA | 95 | GL23024-PA | 1..84 | 1..84 | 425 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13165-PB | 85 | GA13165-PB | 1..85 | 1..85 | 435 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10611-PA | 85 | GM10611-PA | 1..85 | 1..85 | 456 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19599-PA | 95 | GD19599-PA | 1..83 | 1..83 | 446 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10127-PA | 147 | GJ10127-PA | 63..147 | 1..85 | 464 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18946-PA | 85 | GK18946-PA | 1..85 | 1..85 | 441 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24155-PA | 85 | GE24155-PA | 1..84 | 1..84 | 445 | 98.8 | Plus |
Translation from 452 to 709
> LD24607.hyp MASTGEIWLQWFSCCFQQQRSPSRRPHQRLRIDRSMIGNPTNFVHTGHIG SADVELSANRLNAISTQMQSKGGYETNSIHSLHAC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Spec2-PA | 85 | CG14672-PA | 1..85 | 1..85 | 459 | 100 | Plus |