BDGP Sequence Production Resources |
Search the DGRC for LD24627
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 246 |
Well: | 27 |
Vector: | pOT2 |
Associated Gene/Transcript | Slimp-RA |
Protein status: | LD24627.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1512 |
Gene | Date | Evidence |
---|---|---|
CG31133 | 2001-09-19 | Blastp of sequenced clone |
CG31133 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31133 | 2008-04-29 | Release 5.5 accounting |
CG31133 | 2008-08-15 | Release 5.9 accounting |
CG31133 | 2008-12-18 | 5.12 accounting |
1512 bp (1512 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060374
> LD24627.complete TTTGCATTCGATAATAAAAATAATGTTGAGCCTGCGAAGTGTATTAAAAC ACTGCCTTTCGGCAAAGAAAACGTGTAGCAGAAACATCTCCGCGCTGTAC ATAACCGGCGATAAAGCGAACGAAAACTATGTGACTCTGCAGCCGTACAT GGACTTCAATAAAACCTTTGGAGAGCGGCAATTTTTGGAGCAGAGCATCT CCAGCCGGGGATTGGACATTCGTTTGGAAACTGTGCTCAGCAAGTACGAG AAGTATAAAACACATCACGCTCAGCTGTCCAAGGTGGCGGAGGAACGCGA AAGGGTGACCAAGCGCCTAAAGGAGCTAACGAAATCTGGTAGTAGTGCGG TTCAGCTGGAGGAGTTGAAAGAGCATGGGAAATCGTTGCGCAATGAGCTA AAGGCTCTGAAGCAGACTCTCTATCCCATAGAGGATGACTTTATTCATGA CTATCTGCACTTGCCCAACCTTCTGCATGTCCAGTGCCCTGTTGGAGGGG AGGAAAAGCTTCTCTATCGTCATGGGATACCCAAATCAGAAAATAAGACT ACATCCCACTTGGCACGCCAGGAACTTGTACATTTTGTAGACAACAATCG TTACTACTTGATGGAGCAGGCTGCTCTTTTTGACGTAAATGCCATGCAAT CCCTGGCCCGCTATTTCGTCAACCACGGGCACTTCATTCAAACCGCCAAT CCGGACTTTGTGCGTTGCGTTCTCCTGGAAGCAAATGCGACACCCTTATC CGACTATCATCTGGTTCAGGAAGAGCACCTGCAAAACAAGATCAATACCG CCTATTTGACTGGAGGTGCGTCCTTCGAGAGCTACCTTGGTGCCATGACC AAGCTGTGCGTGTATCCCTCGGTGCTGCCCCTTCGGTATGTCTGCTGTGG TCGGAGCTACAACAGAGCGGAAGCGGATTTGTATGGGCCCATTCCTAGTC TTTATACGGCGACACAAACGAATGCGGTACAAATCTTTGTGGCAACGCAA ACGGACAACGAAGCGGACTCCCAACTAGAGCATATTCTCAATCTGGCAAC TGATTTCTACAAAGCACTGGACATACCATTCAGGATTTCTTATGCAACAG CAGCAGATCTAACTCCGGCGGAGAGTATCCGGGCAGTCATCGAAGTTTAT GCCCCCTCACTGCAGCGCTATGTGTGTGTGGGACGTATCAGCAACTACGG AGACTTTGTCTCTAAGCGAATCCTTTTTAGCACGCGGCGGGAGAAGCACT ATGATTTCTTGCACATGGTGGGCGGACCAGTGCTCTACACCTCGCGACTG ATAGCAGCTCTTGTTGAGCATGGCGTGCGCTTGGAAGACTGCAAACTTTT GGGCTCTATTAGTCAGAAACCCGTTCATCAGCAGGATCTACAGCAGTTTA AGGACCTTTTCACGTAAAAAACGATCGGTGTTTAGTTTCTTGTTGTTTGT TCTTAGGCCTAACGATAAGTAAAAGTTAAGTTTTACATAAAAAAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19970764..19972250 | 1488..1 | 7120 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24147435..24148923 | 1489..1 | 7445 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23888266..23889754 | 1489..1 | 7445 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19970764..19972250 | 1..1488 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31133-RA | 1..1395 | 23..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31133-RA | 1..1395 | 23..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slimp-RA | 1..1395 | 23..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31133-RA | 1..1395 | 23..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slimp-RA | 1..1395 | 23..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31133-RA | 1..1488 | 1..1488 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31133-RA | 1..1488 | 1..1488 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slimp-RA | 45..1532 | 1..1488 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31133-RA | 1..1488 | 1..1488 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Slimp-RA | 45..1532 | 1..1488 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24147436..24148923 | 1..1488 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24147436..24148923 | 1..1488 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24147436..24148923 | 1..1488 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19973158..19974645 | 1..1488 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23888267..23889754 | 1..1488 | 100 | Minus |
Translation from 0 to 1416
> LD24627.hyp LHSIIKIMLSLRSVLKHCLSAKKTCSRNISALYITGDKANENYVTLQPYM DFNKTFGERQFLEQSISSRGLDIRLETVLSKYEKYKTHHAQLSKVAEERE RVTKRLKELTKSGSSAVQLEELKEHGKSLRNELKALKQTLYPIEDDFIHD YLHLPNLLHVQCPVGGEEKLLYRHGIPKSENKTTSHLARQELVHFVDNNR YYLMEQAALFDVNAMQSLARYFVNHGHFIQTANPDFVRCVLLEANATPLS DYHLVQEEHLQNKINTAYLTGGASFESYLGAMTKLCVYPSVLPLRYVCCG RSYNRAEADLYGPIPSLYTATQTNAVQIFVATQTDNEADSQLEHILNLAT DFYKALDIPFRISYATAADLTPAESIRAVIEVYAPSLQRYVCVGRISNYG DFVSKRILFSTRREKHYDFLHMVGGPVLYTSRLIAALVEHGVRLEDCKLL GSISQKPVHQQDLQQFKDLFT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Slimp-PA | 464 | CG31133-PA | 1..464 | 8..471 | 2401 | 100 | Plus |
Aats-ser-PB | 417 | CG4938-PB | 85..376 | 154..439 | 180 | 25 | Plus |
Aats-ser-PA | 417 | CG4938-PA | 85..376 | 154..439 | 180 | 25 | Plus |
Translation from 22 to 1416
> LD24627.pep MLSLRSVLKHCLSAKKTCSRNISALYITGDKANENYVTLQPYMDFNKTFG ERQFLEQSISSRGLDIRLETVLSKYEKYKTHHAQLSKVAEERERVTKRLK ELTKSGSSAVQLEELKEHGKSLRNELKALKQTLYPIEDDFIHDYLHLPNL LHVQCPVGGEEKLLYRHGIPKSENKTTSHLARQELVHFVDNNRYYLMEQA ALFDVNAMQSLARYFVNHGHFIQTANPDFVRCVLLEANATPLSDYHLVQE EHLQNKINTAYLTGGASFESYLGAMTKLCVYPSVLPLRYVCCGRSYNRAE ADLYGPIPSLYTATQTNAVQIFVATQTDNEADSQLEHILNLATDFYKALD IPFRISYATAADLTPAESIRAVIEVYAPSLQRYVCVGRISNYGDFVSKRI LFSTRREKHYDFLHMVGGPVLYTSRLIAALVEHGVRLEDCKLLGSISQKP VHQQDLQQFKDLFT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18895-PA | 461 | GF18895-PA | 1..460 | 1..463 | 1979 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12371-PA | 464 | GG12371-PA | 1..464 | 1..464 | 2245 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19093-PA | 465 | GH19093-PA | 1..464 | 1..463 | 1676 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Slimp-PA | 464 | CG31133-PA | 1..464 | 1..464 | 2401 | 100 | Plus |
SerRS-m-PB | 417 | CG4938-PB | 85..376 | 147..432 | 180 | 25 | Plus |
SerRS-m-PA | 417 | CG4938-PA | 85..376 | 147..432 | 180 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23429-PA | 466 | GI23429-PA | 1..465 | 1..463 | 1737 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24144-PA | 466 | GL24144-PA | 1..466 | 1..464 | 1954 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16033-PA | 466 | GA16033-PA | 1..466 | 1..464 | 1942 | 77 | Plus |
Dpse\GA18540-PA | 418 | GA18540-PA | 76..376 | 136..432 | 153 | 24 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23510-PA | 464 | GM23510-PA | 1..464 | 1..464 | 2331 | 93.8 | Plus |
Dsec\GM24223-PA | 417 | GM24223-PA | 84..376 | 146..432 | 174 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18320-PA | 464 | GD18320-PA | 1..464 | 1..464 | 2350 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14532-PA | 466 | GJ14532-PA | 1..465 | 1..463 | 1783 | 71.4 | Plus |
Dvir\GJ14464-PA | 427 | GJ14464-PA | 33..385 | 84..432 | 174 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11931-PA | 465 | GK11931-PA | 1..464 | 1..463 | 1749 | 69.9 | Plus |
Dwil\GK11136-PA | 420 | GK11136-PA | 85..377 | 146..432 | 153 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10826-PA | 464 | GE10826-PA | 1..464 | 1..464 | 2246 | 90.3 | Plus |